Trimin1|350444|estExt_Genemark1.C_Ctg_630030 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|350444
Unique Name	Trimin1\|350444\|estExt_Genemark1.C_Ctg_630030
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1076

Homology

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BLAST of jgi.p|Trimin1|350444 vs. uniprot
Match: A0A836CAM2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAM2_9STRA)

HSP 1 Score: 1298 bits (3358), Expect = 0.000e+0
Identity = 1075/1075 (100.00%), Postives = 1075/1075 (100.00%), Query Frame = 0

Query:    1 MALDSADQEVLKRVIEEHLQQEQCRGNPFDEEQASADTGAPAAGSFGAYAEAAAAGPAAHTIAHEHPAERELARLREEHALALTREAALESTVAVLRRELEGAAVKGDLRLMEALLADVVERLRRSEEERARLQGVEAEAQALRDEVDCLRPAERRLAKVEDALARCRRRLEEAGDVQAQLKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLARCLTAEAEAALVPGLRKSLEKARQAKAELELNDRELRAELAAAPAAAGSLXXXXXXXXXXXXXXXXXLAAVASQLKHGSAAAEAESHRLRDELSAAALHGGSGGGEAAAALGGGVSELNPAITEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELARLRRHNAQLLSEADHNTAATVADLEARLDDAERLSTAYAETLREARSAVAETQAALSESRQRVAELXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEVAAWTQRHAADTQQWRDTAAAAAXXXXXXXXXXXXALELSTAGWSARVSVIAGKLQETEAALAAEIQAKEQALAELCAERQGRAQQVCELQQELSEAIRLADERATVMADQHATEEKERAAELAAENLRNALLTAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELSNAXXXXXXXXXXXXXXXQRVQSECEALLAAAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAEATHRALQSAAXXXXXXXXXXXXXXXXXXETTRASGEEALAAEQERSRAELADLITRGRAAMAAAAARAQTALXXXXXXXXXXXXXXXXXXXXXXXAERERSALYAQAEDARRALAASGXXXXXXXXXXXATVAALRGEVEELAAENEALREALEGGGGYVGMQGATPNINSSSGGGSSGAYAEMVAQFELQRHRLAQEKRDVLLRCAAAEAAADAXXXXXADAEAEATTLRHSVTSLQLRCERVEHRANRRNDLAAAXXXXXXXXDTAHDAAAVAKSHRAPSALSAVAAPARVHVMSTGAAADGXXXXXXXXXXISAVDVSAAAAPTGLRSSNMGDKKPPVDFDAGSGDMLPTAEGRRPECAQS 1075
            MALDSADQEVLKRVIEEHLQQEQCRGNPFDEEQASADTGAPAAGSFGAYAEAAAAGPAAHTIAHEHPAERELARLREEHALALTREAALESTVAVLRRELEGAAVKGDLRLMEALLADVVERLRRSEEERARLQGVEAEAQALRDEVDCLRPAERRLAKVEDALARCRRRLEEAGDVQAQLKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLARCLTAEAEAALVPGLRKSLEKARQAKAELELNDRELRAELAAAPAAAGSLXXXXXXXXXXXXXXXXXLAAVASQLKHGSAAAEAESHRLRDELSAAALHGGSGGGEAAAALGGGVSELNPAITEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELARLRRHNAQLLSEADHNTAATVADLEARLDDAERLSTAYAETLREARSAVAETQAALSESRQRVAELXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEVAAWTQRHAADTQQWRDTAAAAAXXXXXXXXXXXXALELSTAGWSARVSVIAGKLQETEAALAAEIQAKEQALAELCAERQGRAQQVCELQQELSEAIRLADERATVMADQHATEEKERAAELAAENLRNALLTAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELSNAXXXXXXXXXXXXXXXQRVQSECEALLAAAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAEATHRALQSAAXXXXXXXXXXXXXXXXXXETTRASGEEALAAEQERSRAELADLITRGRAAMAAAAARAQTALXXXXXXXXXXXXXXXXXXXXXXXAERERSALYAQAEDARRALAASGXXXXXXXXXXXATVAALRGEVEELAAENEALREALEGGGGYVGMQGATPNINSSSGGGSSGAYAEMVAQFELQRHRLAQEKRDVLLRCAAAEAAADAXXXXXADAEAEATTLRHSVTSLQLRCERVEHRANRRNDLAAAXXXXXXXXDTAHDAAAVAKSHRAPSALSAVAAPARVHVMSTGAAADGXXXXXXXXXXISAVDVSAAAAPTGLRSSNMGDKKPPVDFDAGSGDMLPTAEGRRPECAQS
Sbjct:    1 MALDSADQEVLKRVIEEHLQQEQCRGNPFDEEQASADTGAPAAGSFGAYAEAAAAGPAAHTIAHEHPAERELARLREEHALALTREAALESTVAVLRRELEGAAVKGDLRLMEALLADVVERLRRSEEERARLQGVEAEAQALRDEVDCLRPAERRLAKVEDALARCRRRLEEAGDVQAQLKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLARCLTAEAEAALVPGLRKSLEKARQAKAELELNDRELRAELAAAPAAAGSLXXXXXXXXXXXXXXXXXLAAVASQLKHGSAAAEAESHRLRDELSAAALHGGSGGGEAAAALGGGVSELNPAITEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELARLRRHNAQLLSEADHNTAATVADLEARLDDAERLSTAYAETLREARSAVAETQAALSESRQRVAELXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEVAAWTQRHAADTQQWRDTAAAAAXXXXXXXXXXXXALELSTAGWSARVSVIAGKLQETEAALAAEIQAKEQALAELCAERQGRAQQVCELQQELSEAIRLADERATVMADQHATEEKERAAELAAENLRNALLTAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELSNAXXXXXXXXXXXXXXXQRVQSECEALLAAAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAEATHRALQSAAXXXXXXXXXXXXXXXXXXETTRASGEEALAAEQERSRAELADLITRGRAAMAAAAARAQTALXXXXXXXXXXXXXXXXXXXXXXXAERERSALYAQAEDARRALAASGXXXXXXXXXXXATVAALRGEVEELAAENEALREALEGGGGYVGMQGATPNINSSSGGGSSGAYAEMVAQFELQRHRLAQEKRDVLLRCAAAEAAADAXXXXXADAEAEATTLRHSVTSLQLRCERVEHRANRRNDLAAAXXXXXXXXDTAHDAAAVAKSHRAPSALSAVAAPARVHVMSTGAAADGXXXXXXXXXXISAVDVSAAAAPTGLRSSNMGDKKPPVDFDAGSGDMLPTAEGRRPECAQS 1075

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350444 vs. uniprot

BLAST of jgi.p|Trimin1|350444 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CAM2_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 594..716
None	No IPR available	COILS	Coil	Coil	coord: 790..824
None	No IPR available	COILS	Coil	Coil	coord: 401..449
None	No IPR available	COILS	Coil	Coil	coord: 150..206
None	No IPR available	COILS	Coil	Coil	coord: 109..146
None	No IPR available	COILS	Coil	Coil	coord: 917..937
None	No IPR available	COILS	Coil	Coil	coord: 229..256
None	No IPR available	COILS	Coil	Coil	coord: 843..863
None	No IPR available	COILS	Coil	Coil	coord: 531..555
None	No IPR available	COILS	Coil	Coil	coord: 456..483
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1032..1075

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_63	contig	Contig_63:288520..304640 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350444	mRNA_10282	Tribonema minus UTEX_B_3156	mRNA	Contig_63 288520..304728 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|350444|estExt_Genemark1.C_Ctg_630030 ID=Trimin1|350444|estExt_Genemark1.C_Ctg_630030|Name=jgi.p|Trimin1|350444|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1076bp
MALDSADQEVLKRVIEEHLQQEQCRGNPFDEEQASADTGAPAAGSFGAYA
EAAAAGPAAHTIAHEHPAERELARLREEHALALTREAALESTVAVLRREL
EGAAVKGDLRLMEALLADVVERLRRSEEERARLQGVEAEAQALRDEVDCL
RPAERRLAKVEDALARCRRRLEEAGDVQAQLKREEEAHAEAQLKREEDAH
AEAQLKREEDAHAEVLARCLTAEAEAALVPGLRKSLEKARQAKAELELND
RELRAELAAAPAAAGSLDRELRAELAAAQAAAGSLAAVASQLKHGSAAAE
AESHRLRDELSAAALHGGSGGGEAAAALGGGVSELNPAITEAAAALGGGV
SELSPAITEAGAALGSGGSELNPAITQELARLRRHNAQLLSEADHNTAAT
VADLEARLDDAERLSTAYAETLREARSAVAETQAALSESRQRVAELEMLR
EARSTVARTQAALKDLWQRVTELEEEVAAWTQRHAADTQQWRDTAAAAAQ
ATAHAAARARAALELSTAGWSARVSVIAGKLQETEAALAAEIQAKEQALA
ELCAERQGRAQQVCELQQELSEAIRLADERATVMADQHATEEKERAAELA
AENLRNALLTAQQERERAAEDAAENLRNVLQNAQEEKERAAEELSNALQN
AREDQERAADELQRVQSECEALLAAAEQRHADAQLQRVQSECEALLAAAE
QRHADAQAEAEATHRALQSAAAEAAALAADALARARAETETTRASGEEAL
AAEQERSRAELADLITRGRAAMAAAAARAQTALAAQTARAAAAETATEAA
LSRARRAERERSALYAQAEDARRALAASGGGGGGGGGEGGATVAALRGEV
EELAAENEALREALEGGGGYVGMQGATPNINSSSGGGSSGAYAEMVAQFE
LQRHRLAQEKRDVLLRCAAAEAAADAAARRAADAEAEATTLRHSVTSLQL
RCERVEHRANRRNDLAAAAATAAAAADTAHDAAAVAKSHRAPSALSAVAA
PARVHVMSTGAAADGGGADGGGNSGISAVDVSAAAAPTGLRSSNMGDKKP
PVDFDAGSGDMLPTAEGRRPECAQS*