Trimin1|350240|estExt_Genemark1.C_Ctg_590058 (polypeptide) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|350240 vs. uniprot
Match: A0A836CBA3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBA3_9STRA) HSP 1 Score: 749 bits (1935), Expect = 3.670e-268 Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 0
Query: 1 MEVQAQKATAVAAEIARQEAVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAVTAALAEAAEAQVXXXXXXXXXXXXXXXXXXXXLRELLARRAVSSRHRNVLQQLLSAAVDSTAAASVRRWRHAAAXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSDGGTGADAALQPVTCWTIARSGGIEGTVEVIDQLRWRNMLCGADYERAIDAHHRAKGELGARRLLDDMEKHGFPWTHSACMSVVLALSDARKVDGAMELLDEMSVRGVAATSKDYVMLLDRFGCKRAMALLHHMESHGVVPDFEYYAGAMGACTLRVGLNGVVDLDEASNLLQWMLDKGVSDFETWTMLLEAYGRVGQADRMLDAYKAMCACARRHAAAATVDADDDGACTNYRARPLVDTIDTMLEYAANLDSVHVAEYVWEEFGRWEGLQPDGDTVGRMARVLADAGELEKAEKLHASTMPKHSNYRKQREAREAGSEANNLL 534
MEVQAQKATAVAAEIARQEAVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAVTAALAEAAEAQVXXXXXXXXXXXXXXXXXXXXLRELLARRAVSSRHRNVLQQLLSAAVDSTAAASVRRWRHAAAXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSDGGTGADAALQPVTCWTIARSGGIEGTVEVIDQLRWRNMLCGADYERAIDAHHRAKGELGARRLLDDMEKHGFPWTHSACMSVVLALSDARKVDGAMELLDEMSVRGVAATSKDYVMLLDRFGCKRAMALLHHMESHGVVPDFEYYAGAMGACTLRVGLNGVVDLDEASNLLQWMLDKGVSDFETWTMLLEAYGRVGQADRMLDAYKAMCACARRHAAAATVDADDDGACTNYRARPLVDTIDTMLEYAANLDSVHVAEYVWEEFGRWEGLQPDGDTVGRMARVLADAGELEKAEKLHASTMPKHSNYRKQREAREAGSEANNLL
Sbjct: 1 MEVQAQKATAVAAEIARQEAVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAVTAALAEAAEAQVXXXXXXXXXXXXXXXXXXXXLRELLARRAVSSRHRNVLQQLLSAAVDSTAAASVRRWRHAAAXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSDGGTGADAALQPVTCWTIARSGGIEGTVEVIDQLRWRNMLCGADYERAIDAHHRAKGELGARRLLDDMEKHGFPWTHSACMSVVLALSDARKVDGAMELLDEMSVRGVAATSKDYVMLLDRFGCKRAMALLHHMESHGVVPDFEYYAGAMGACTLRVGLNGVVDLDEASNLLQWMLDKGVSDFETWTMLLEAYGRVGQADRMLDAYKAMCACARRHAAAATVDADDDGACTNYRARPLVDTIDTMLEYAANLDSVHVAEYVWEEFGRWEGLQPDGDTVGRMARVLADAGELEKAEKLHASTMPKHSNYRKQREAREAGSEANNLL 534
BLAST of jgi.p|Trimin1|350240 vs. uniprot
Match: A0A835YW77_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW77_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 2.230e-9 Identity = 40/121 (33.06%), Postives = 64/121 (52.89%), Query Frame = 0
Query: 300 RKVDGAMELLDEMSVRGVAATSKDYVMLL-------------DRFGCKRAMALLHHMESHGVVPDFEYYAGAMGACTLRVGLNGVVDLDEASNLLQWMLDKGVSDFE-TWTMLLEAYGRVG 406
R+++ A++L+DEM R ++ + DY++L+ DR G ++A+ LL M+ G VPD +Y+ A+ C DL A N Q M DKG+ + +W LL+A+GR G
Sbjct: 12 RRLNAALQLIDEMQQRNISPSDADYLILIVACDRGKRRTRGGDRGGSEQALELLQRMQDKGPVPDLRHYSAAITVCVTEG------DLANAVNTFQSMRDKGIKPNDWSWAALLDAFGRAG 126
BLAST of jgi.p|Trimin1|350240 vs. uniprot
Match: A0A836CHU7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHU7_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 8.400e-5 Identity = 68/258 (26.36%), Postives = 109/258 (42.25%), Query Frame = 0
Query: 271 RRLLDDMEKHGFPWTHSACMSVVLALSDARKVDGAMELLDEMSVRGVAATSKDYVMLLDRF--GCKRAM----ALLHHMESHGVVP--------------DFEYYAGAMGACTLRVGLNG----VVDLDEASNLLQWMLDKGVSDFETWTMLLEAYGRVGQADRMLDAYKAMCACARRHAAAATVDADDDGACTNYRARPLVDTIDTMLEYAANLDSVHVAEYVWEEFGRWEGLQPDGDTVGRMARVLADAGELEKAE 504
+RLL E+ GFPWT +AC +V+ A A ++ AM+L+++M +RG++ + +Y+ L++ G R++ LL + G VP + Y+ A+ AC + G G ++++ + + K V F GRV D ML YK M A P V I+ ML +A + + VAE +W E + LQP + + R A A + EK E
Sbjct: 660 KRLL---EREGFPWTQTACSAVLQACRKAGEMHLAMQLIEQMQLRGISPHASEYLKLIEHVASGSDRSVQALRTLLLCLCDIGSVPRGAIELMRDIDGAWTHDAYSAALQACA-QAGRWGDALRLLNIRMRQRSICSSVGKRVGPFNFEQQTQTDKGRV---DEMLALYKNMRASGHE---------------------PDVIAINDMLAHAGSAGNRDVAEALWRELRDLQ-LQPTRSSYNALVRCYAVAKDPEKEE 888 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350240 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|350240|estExt_Genemark1.C_Ctg_590058 ID=Trimin1|350240|estExt_Genemark1.C_Ctg_590058|Name=jgi.p|Trimin1|350240|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=535bpback to top |