Trimin1|350110|estExt_Genemark1.C_Ctg_560040 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350110
Unique NameTrimin1|350110|estExt_Genemark1.C_Ctg_560040
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length459
Homology
BLAST of jgi.p|Trimin1|350110 vs. uniprot
Match: A0A835YPS3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPS3_9STRA)

HSP 1 Score: 648 bits (1671), Expect = 1.720e-230
Identity = 458/458 (100.00%), Postives = 458/458 (100.00%), Query Frame = 0
Query:    1 MHATLDIVAANEKQQQQQLNSPAIAELRRLAAQGATIPLAAHKALLSNFEAAAHAALQEAAATRTRVLGEMRGTFMEKYAELAQEVQAKGKAAQRVGELEQALEQALAAKAQLKEMAKAAVKETIAAERQGGLMRGRAKAAEAEAAALRRGISAASLRXXXTELAARLXXXXXXXXXXXXXXXXXXXXXXXXXGRVEASESEAAWLRKEADAQQAEISRIRSALRRAKSKAEAAQASVAEVTAFAERQLVAGHEAKLQALRALRVDMEGQMAAARAELEARLSNEQQRSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVNAELKRAFAALAEQSKQDLEVTSAMWRTQVSGLVHEVTLRDARIAELSAKIADRPTRDEDAHRQLMAATAEVASLRAELQLKDEVLEMYREEVVKLAREAAEPAQAKADARTNAPALPRAPRRDAATATASLQSS 458
            MHATLDIVAANEKQQQQQLNSPAIAELRRLAAQGATIPLAAHKALLSNFEAAAHAALQEAAATRTRVLGEMRGTFMEKYAELAQEVQAKGKAAQRVGELEQALEQALAAKAQLKEMAKAAVKETIAAERQGGLMRGRAKAAEAEAAALRRGISAASLRXXXTELAARLXXXXXXXXXXXXXXXXXXXXXXXXXGRVEASESEAAWLRKEADAQQAEISRIRSALRRAKSKAEAAQASVAEVTAFAERQLVAGHEAKLQALRALRVDMEGQMAAARAELEARLSNEQQRSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVNAELKRAFAALAEQSKQDLEVTSAMWRTQVSGLVHEVTLRDARIAELSAKIADRPTRDEDAHRQLMAATAEVASLRAELQLKDEVLEMYREEVVKLAREAAEPAQAKADARTNAPALPRAPRRDAATATASLQSS
Sbjct:    1 MHATLDIVAANEKQQQQQLNSPAIAELRRLAAQGATIPLAAHKALLSNFEAAAHAALQEAAATRTRVLGEMRGTFMEKYAELAQEVQAKGKAAQRVGELEQALEQALAAKAQLKEMAKAAVKETIAAERQGGLMRGRAKAAEAEAAALRRGISAASLRXXXTELAARLXXXXXXXXXXXXXXXXXXXXXXXXXGRVEASESEAAWLRKEADAQQAEISRIRSALRRAKSKAEAAQASVAEVTAFAERQLVAGHEAKLQALRALRVDMEGQMAAARAELEARLSNEQQRSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVNAELKRAFAALAEQSKQDLEVTSAMWRTQVSGLVHEVTLRDARIAELSAKIADRPTRDEDAHRQLMAATAEVASLRAELQLKDEVLEMYREEVVKLAREAAEPAQAKADARTNAPALPRAPRRDAATATASLQSS 458          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350110 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YPS3_9STRA1.720e-230100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 320..340
NoneNo IPR availableCOILSCoilCoilcoord: 257..316
NoneNo IPR availableCOILSCoilCoilcoord: 196..237
NoneNo IPR availableCOILSCoilCoilcoord: 96..123
NoneNo IPR availableCOILSCoilCoilcoord: 395..415
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 421..458

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_56contigContig_56:369140..382254 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350110mRNA_14101Tribonema minus UTEX_B_3156 mRNAContig_56 368559..382254 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350110|estExt_Genemark1.C_Ctg_560040 ID=Trimin1|350110|estExt_Genemark1.C_Ctg_560040|Name=jgi.p|Trimin1|350110|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=459bp
MHATLDIVAANEKQQQQQLNSPAIAELRRLAAQGATIPLAAHKALLSNFE
AAAHAALQEAAATRTRVLGEMRGTFMEKYAELAQEVQAKGKAAQRVGELE
QALEQALAAKAQLKEMAKAAVKETIAAERQGGLMRGRAKAAEAEAAALRR
GISAASLRRGITELAARLAASLRRGISAASLRRGITELAARLGGRVEASE
SEAAWLRKEADAQQAEISRIRSALRRAKSKAEAAQASVAEVTAFAERQLV
AGHEAKLQALRALRVDMEGQMAAARAELEARLSNEQQRSVQVKARLSNEQ
QRSAQLEARLSNEQQRSAQVDAVNAELKRAFAALAEQSKQDLEVTSAMWR
TQVSGLVHEVTLRDARIAELSAKIADRPTRDEDAHRQLMAATAEVASLRA
ELQLKDEVLEMYREEVVKLAREAAEPAQAKADARTNAPALPRAPRRDAAT
ATASLQSS*
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