Trimin1|350029|estExt_Genemark1.C_Ctg_540088 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350029
Unique NameTrimin1|350029|estExt_Genemark1.C_Ctg_540088
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length198
Homology
BLAST of jgi.p|Trimin1|350029 vs. uniprot
Match: A0A835YZ44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ44_9STRA)

HSP 1 Score: 314 bits (805), Expect = 3.470e-107
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
Query:    1 MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTTASGRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIEGKNAIEAAKTHKRAAKRQXXXXXXXXXXTGPGXXXXXXXXXXXXXXXDSVGEEEFTYEPVSIALRKPAVVVNGAHVEIPTDGSFLERMRAVVGAQAVPEVGGA 197
            MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTTASGRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIEGKNAIEAAKTHKRAAKRQXXXXXXXXXXTGPGXXXXXXXXXXXXXXXDSVGEEEFTYEPVSIALRKPAVVVNGAHVEIPTDGSFLERMRAVVGAQAVPEVGGA
Sbjct:    1 MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTTASGRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIEGKNAIEAAKTHKRAAKRQXXXXXXXXXXTGPGXXXXXXXXXXXXXXXDSVGEEEFTYEPVSIALRKPAVVVNGAHVEIPTDGSFLERMRAVVGAQAVPEVGGA 197          
BLAST of jgi.p|Trimin1|350029 vs. uniprot
Match: A0A6S9D7T2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9D7T2_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.090e-23
Identity = 78/195 (40.00%), Postives = 107/195 (54.87%), Query Frame = 0
Query:    1 MGRYTTVQAYSDSNPKVAKVSYEQATQGGE--KHTTASGRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIEG-KNAIEAAKTHKRAAKRQXXXXXXXXXXTGPGXXXXXXXXXXXXXXXDSV--GEEEFTYEPVSIALRKPAVVVNGAHVEIPTDGSFLERMRAVVGAQA 190
            MGRYTTVQAY+D+NP +  VSY+QAT   E    T  +G ++ +KVDN  GSTAGAGSGEFH+YR AR RE+ RMA +E     +E+++ L    E  K+ +E  +  K A +R+X     XXXX                   +++  GEEEF Y P    +       +   +E   DGSFLE M+  + A+A
Sbjct:    1 MGRYTTVQAYADNNPNMRSVSYDQATGKTEPSSSTAGAGAVKPEKVDNPYGSTAGAGSGEFHVYRHARSREMARMAQLEY----EEKQQLLHEDFEKRKHEMETEEERKTAKRRKXRMRGKXXXXXXXNMKLGGVGLQEDGTGGENLEGGEEEFEYTPTHRQIENKGDNDDAEKIEFKNDGSFLEMMKKKLAAEA 191          
BLAST of jgi.p|Trimin1|350029 vs. uniprot
Match: D8LC75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC75_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 8.620e-23
Identity = 59/103 (57.28%), Postives = 69/103 (66.99%), Query Frame = 0
Query:    1 MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTTASGRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIEGKNAIEAAK 103
            MGRYTTVQAYSD+NPK+  VSY+QA         A G+L  +K D VMGS AGAGSGEFH YRA RRRE+HR+AA+      DEE +  EAT +   AIE  K
Sbjct:    1 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDNDEGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAM------DEEAQVAEATAKLHEAIEKGK 97          
BLAST of jgi.p|Trimin1|350029 vs. uniprot
Match: A0A7S2V2K9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2K9_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.340e-21
Identity = 57/94 (60.64%), Postives = 67/94 (71.28%), Query Frame = 0
Query:    1 MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTTA----------SGRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADE 84
            MGRYTTVQ Y+D+NPKV +VSY QA  G +K T A          SG+++  KVDNVMGSTAGAGSG+FH YRA R REI RM AIEA A+ D+
Sbjct:    1 MGRYTTVQTYTDNNPKVVQVSYAQAV-GQDKATRAQDGGAMVEQKSGKVKVPKVDNVMGSTAGAGSGDFHSYRATRMREIKRMEAIEAGARQDD 93          
BLAST of jgi.p|Trimin1|350029 vs. uniprot
Match: A0A329S4L5_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S4L5_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.230e-18
Identity = 77/188 (40.96%), Postives = 104/188 (55.32%), Query Frame = 0
Query:    1 MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTT-ASGR-LQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIEGKNAIE-AAKTHKRAAKRQXXXXXXXXXXTGPGXXXXXXXXXXXXXXXDSVGEEEFTYEPVSIALRKPAVVVNGAHVEIPTDGSFLERMRAV 185
            MGRYT+VQ +SD + + A V+Y   +   E   T A  R L  ++VDNV GS+AGAGSG+FH YRA+RRRE+ R+AA+E   K ++E+R  E      NA E  AK HKRA KR+XXXXX                         ++ EE+   E  ++  ++      G   EIP DGSFLE+M A+
Sbjct:    1 MGRYTSVQTFSDQDAQGAAVAYTAPSSATESSATDAKDRNLNVNRVDNVSGSSAGAGSGDFHTYRASRRREMERVAAMEQRYKENKEQREFE-DKRXXNAEEFEAKMHKRAEKRRXXXXXAKAR---------------------ALDEED---EEKTVDKKEKVPETPGGVPEIPNDGSFLEKMLAL 163          
BLAST of jgi.p|Trimin1|350029 vs. uniprot
Match: A0A225X3R8_9STRA (RNA-binding protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3R8_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.120e-17
Identity = 70/195 (35.90%), Postives = 98/195 (50.26%), Query Frame = 0
Query:    1 MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTTASG------RLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIEGKNAIEAAKTHKRAAKRQXXXXXXXXXXTGPGXXXXXXXXXXXXXXXDSVGEEE----FTYEPVSIALRKPAVVVNGAHVEIPTDGSFLERMRAV 185
            MGRYT+VQ +SD + + A V+Y+ A++  E    ASG      +   ++VDNV GS+AGAGSG+FH YRA+RRRE+ R+AA+E   K ++ ++  EAT + K     AK  KRA KR+                             D V EE+               +  +   G   EIP DGSFLE+M A+
Sbjct:    1 MGRYTSVQTFSDQDAQGAAVTYDAASKD-ESSAAASGADAKDGKFHVNRVDNVSGSSAGAGSGDFHTYRASRRREMERVAAMEQRYKDNKAQQEFEATRKRKAEEFDAKMQKRAEKRRRRKDRAKAKAL------------------DEVQEEKQEKHXXXXXXXXXXXEQVLETPGGVPEIPNDGSFLEKMLAL 176          
BLAST of jgi.p|Trimin1|350029 vs. uniprot
Match: A0A7S2HD40_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HD40_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 6.550e-17
Identity = 50/91 (54.95%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    1 MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTTA----------SGRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAK 81
            MGRYTTVQAY+D+NP +  VSY+QAT        A          SG ++ +KVDN  GSTAGAGSGEFH+YR AR RE+ RMA +E A K
Sbjct:    1 MGRYTTVQAYADNNPSMRSVSYDQATGRSSSGVAAAASSSATGPGSGSVKPEKVDNPYGSTAGAGSGEFHVYRHARSREMARMAQLEHAEK 91          
BLAST of jgi.p|Trimin1|350029 vs. uniprot
Match: A0A484DQI6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQI6_BRELC)

HSP 1 Score: 82.4 bits (202), Expect = 2.580e-16
Identity = 45/81 (55.56%), Postives = 58/81 (71.60%), Query Frame = 0
Query:    1 MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTTAS----GRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIE 77
            MGRYTTVQ +SD + +VA V+Y+   +  E   T S    G+L  ++VDNV GS+AGAGSGEFH YRAARRRE+ R+A +E
Sbjct:    1 MGRYTTVQTFSDQDAQVATVAYDATVKEKEPSGTTSEIKDGKLHVNRVDNVSGSSAGAGSGEFHSYRAARRREMERVAVME 81          
BLAST of jgi.p|Trimin1|350029 vs. uniprot
Match: A0A0P1A6J8_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6J8_PLAHL)

HSP 1 Score: 81.6 bits (200), Expect = 5.300e-16
Identity = 71/189 (37.57%), Postives = 98/189 (51.85%), Query Frame = 0
Query:    1 MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTTAS----GRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIEGKNAIEAAKTHKRAAKRQXXXXXXXXXXTGPGXXXXXXXXXXXXXXXDSVGEEEFTYEPVSIALRKPAVVVNGAHVEIPTDGSFLERMRAV 185
            MG YTT+Q +SD + + A V+Y+  +   +    AS    G+L  ++VDNV GS+AGAGSGEFH YRAARRRE+ R+A++E   K ++ ++  E   + K  I  AK  KR  KR+XXX       +                  +SV     + E +   L  P     G   EIP DGSFLE M A+
Sbjct:    1 MGCYTTLQTFSDQDAQGAAVAYDADSNAKDSSDAASNVKGGKLVVNRVDNVSGSSAGAGSGEFHTYRAARRREMDRIASMEQQYKDNKAQQEFEDKRKRKAEIFEAKMQKRTEKRRXXXERAKAKTS----------------EIESVVNTVLSKEKM---LETP-----GGVPEIPNDGSFLETMLAL 165          
BLAST of jgi.p|Trimin1|350029 vs. uniprot
Match: A0A067CZD8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CZD8_SAPPC)

HSP 1 Score: 81.6 bits (200), Expect = 6.740e-16
Identity = 68/194 (35.05%), Postives = 91/194 (46.91%), Query Frame = 0
Query:    1 MGRYTTVQAYSDSNPKVAKVSYEQA----------TQGGEKHTTASGRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIEGKNAIEAAKTHKRAAKRQXXXXXXXXXXTGPGXXXXXXXXXXXXXXXDSVGEEEFTYEPVSIALRKPAVVVNGAHVEIPTDGSFLERMRA 184
            MGRYTT Q Y+D    V  V YE             +  ++   +  R + ++VDNV GSTAGAGSGEFHMYRAARRRE+ R+ A+EA  K   E  A +   +   A    KT ++AAKR+                               +G +    EP+ +    P V+  G   EIP DGSFL ++ A
Sbjct:    1 MGRYTTEQTYTDKAATVGTVPYEVVKEKEEAAPAPAEASKESKESKERFKFNRVDNVAGSTAGAGSGEFHMYRAARRREMERVGAMEAEHKKKMEDLAFQEKRKRAQAELEEKTRQKAAKRRRKQENAKVKKM--------------------MGADATKDEPLDVT---PDVMPGGVP-EIPNDGSFLAKLLA 170          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350029 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZ44_9STRA3.470e-107100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S9D7T2_9STRA1.090e-2340.00Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
D8LC75_ECTSI8.620e-2357.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V2K9_9STRA1.340e-2160.64Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A329S4L5_9STRA2.230e-1840.96Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A225X3R8_9STRA1.120e-1735.90RNA-binding protein n=1 Tax=Phytophthora megakarya... [more]
A0A7S2HD40_9STRA6.550e-1754.95Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A484DQI6_BRELC2.580e-1655.56Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A0P1A6J8_PLAHL5.300e-1637.57Uncharacterized conserved protein n=1 Tax=Plasmopa... [more]
A0A067CZD8_SAPPC6.740e-1635.05Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 99..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..120
NoneNo IPR availablePANTHERPTHR13507:SF0PRKR-INTERACTING PROTEIN 1coord: 30..126
IPR009548PRKR-interacting protein 1PFAMPF06658DUF1168coord: 31..136
e-value: 1.7E-27
score: 95.9
IPR009548PRKR-interacting protein 1PANTHERPTHR13507UNCHARACTERIZEDcoord: 30..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_54contigContig_54:696714..698153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350029mRNA_7102Tribonema minus UTEX_B_3156 mRNAContig_54 696714..698332 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350029|estExt_Genemark1.C_Ctg_540088 ID=Trimin1|350029|estExt_Genemark1.C_Ctg_540088|Name=jgi.p|Trimin1|350029|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=198bp
MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTTASGRLQTDKVDNVMGS
TAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIEGKNAIE
AAKTHKRAAKRQKRKAAAKRAKTGPGGAAADAAAGSDGGGGDSVGEEEFT
YEPVSIALRKPAVVVNGAHVEIPTDGSFLERMRAVVGAQAVPEVGGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009548Prkrip1