Trimin1|349932|estExt_Genemark1.C_Ctg_520006 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349932
Unique NameTrimin1|349932|estExt_Genemark1.C_Ctg_520006
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length130
Homology
BLAST of jgi.p|Trimin1|349932 vs. uniprot
Match: A0A836CBG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG3_9STRA)

HSP 1 Score: 214 bits (545), Expect = 8.220e-69
Identity = 118/129 (91.47%), Postives = 119/129 (92.25%), Query Frame = 0
Query:    1 MGARILLGFAMALATAYSCTTEVWQAGGVKKCVDPCDYSNVIWDRHGNAMCLQYQLTTGGQQICPWSNIAYDAAGTPLCMVSQNNKEXXXXXXXXXXXXXXXXXVSTGDGFSCPAERIKYNDAHDLYCA 129
            MGARILLGFAMALATAYSCTTEVWQAGGVKKCVDPCDYSNVIWDRHGNAMCLQYQLTTGGQQICPW         TPLCMVSQNNKEXXXXXXXXXXXXXXXXXVSTGDGFSCPAERI+YNDAHD YCA
Sbjct:    2 MGARILLGFAMALATAYSCTTEVWQAGGVKKCVDPCDYSNVIWDRHGNAMCLQYQLTTGGQQICPWXXXXXXXXXTPLCMVSQNNKEXXXXXXXXXXXXXXXXXVSTGDGFSCPAERIRYNDAHDPYCA 130          
BLAST of jgi.p|Trimin1|349932 vs. uniprot
Match: A0A835YPY2_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY2_9STRA)

HSP 1 Score: 209 bits (533), Expect = 6.570e-68
Identity = 116/129 (89.92%), Postives = 117/129 (90.70%), Query Frame = 0
Query:    1 MGARILLGFAMALATAYSCTTEVWQAGGVKKCVDPCDYSNVIWDRHGNAMCLQYQLTTGGQQICPWSNIAYDAAGTPLCMVSQNNKEXXXXXXXXXXXXXXXXXVSTGDGFSCPAERIKYNDAHDLYCA 129
            M ARILLGFAMAL TAYSCTTEVWQAGGVKKCVDPCDYSNVIWDRHGNAMCLQYQLTTGGQQICPW         TPLCMVSQNNKEXXXXXXXXXXXXXXXXXVSTGDGFSCPAERI+YNDAHD YCA
Sbjct:    2 MEARILLGFAMALTTAYSCTTEVWQAGGVKKCVDPCDYSNVIWDRHGNAMCLQYQLTTGGQQICPWXXXXXXXXXTPLCMVSQNNKEXXXXXXXXXXXXXXXXXVSTGDGFSCPAERIRYNDAHDPYCA 130          
BLAST of jgi.p|Trimin1|349932 vs. uniprot
Match: A0A835Z920_9STRA (Uncharacterized protein n=4 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z920_9STRA)

HSP 1 Score: 204 bits (519), Expect = 8.940e-66
Identity = 111/129 (86.05%), Postives = 119/129 (92.25%), Query Frame = 0
Query:    1 MGARILLGFAMALATAYSCTTEVWQAGGVKKCVDPCDYSNVIWDRHGNAMCLQYQLTTGGQQICPWSNIAYDAAGTPLCMVSQNNKEXXXXXXXXXXXXXXXXXVSTGDGFSCPAERIKYNDAHDLYCA 129
            MGARIL+  AMAL TAYSCTTEVWQAGGVKKCVDPC+YSNV+WDRHGNAMCLQYQLTTGGQQICPWSNIAYDA GTP+CM+SQNN  XXXXXXXXXXXXXXXXXVST +GFSCPAERIKYN + D YC+
Sbjct:    2 MGARILICLAMALTTAYSCTTEVWQAGGVKKCVDPCNYSNVVWDRHGNAMCLQYQLTTGGQQICPWSNIAYDADGTPVCMISQNNXXXXXXXXXXXXXXXXXXXVSTSEGFSCPAERIKYNGSLDPYCS 130          
BLAST of jgi.p|Trimin1|349932 vs. uniprot
Match: A0A835YJX7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJX7_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.060e-59
Identity = 109/118 (92.37%), Postives = 111/118 (94.07%), Query Frame = 0
Query:    1 MGARILLGFAMALATAYSCTTEVWQAGGVKKCVDPCDYSNVIWDRHGNAMCLQYQLTTGGQQICPWSNIAYDAAGTPLCMVSQNNKEXXXXXXXXXXXXXXXXXVSTGDGFSCPAERI 118
            MGARILLGFAMAL TAYSCTTEV QAGGVKKCV PCDYSNVIWDRHG A+CLQYQLTTGGQQICPWSNIAY A GTPLCMVSQNN+ XXXXXXXXXXXXXXXXXVSTGDGFSCPAERI
Sbjct:    1 MGARILLGFAMALTTAYSCTTEVSQAGGVKKCVAPCDYSNVIWDRHGTALCLQYQLTTGGQQICPWSNIAYGADGTPLCMVSQNNQXXXXXXXXXXXXXXXXXXVSTGDGFSCPAERI 118          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349932 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CBG3_9STRA8.220e-6991.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YPY2_9STRA6.570e-6889.92Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835Z920_9STRA8.940e-6686.05Uncharacterized protein n=4 Tax=Tribonema minus Ta... [more]
A0A835YJX7_9STRA1.060e-5992.37Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_52contigContig_52:38656..39883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349932mRNA_9908Tribonema minus UTEX_B_3156 mRNAContig_52 38656..40388 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349932|estExt_Genemark1.C_Ctg_520006 ID=Trimin1|349932|estExt_Genemark1.C_Ctg_520006|Name=jgi.p|Trimin1|349932|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=130bp
MGARILLGFAMALATAYSCTTEVWQAGGVKKCVDPCDYSNVIWDRHGNAM
CLQYQLTTGGQQICPWSNIAYDAAGTPLCMVSQNNKELCKTSSIAYDHAH
RPVCVSTGDGFSCPAERIKYNDAHDLYCA*
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