Trimin1|349867|estExt_Genemark1.C_Ctg_500082 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349867
Unique NameTrimin1|349867|estExt_Genemark1.C_Ctg_500082
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length253
Homology
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BLAST of jgi.p|Trimin1|349867 vs. uniprot
Match: A0A835YYW1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW1_9STRA)

HSP 1 Score: 447 bits (1151), Expect = 4.220e-158
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0 
Query:    1 MVIAAFARLWLPIFRYVGFHYLNAALVSRGWRALYATVHRAFRSRLPLLPCCTLRGHPQNLHLVTSIKHMASSVPLLAWAFDNGCPRNSVILWSAAARGDLAVLKFAHESDVPWGMDYPWGAAWRATETCSAAAQHGRVEALLWLRDNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRDISSAVQPSVNGFRGPVDRILACVEWVLADGCPCDEETMPYCQHLRERVAREAAAAAEGGSAGRAGSGA 252
            MVIAAFARLWLPIFRYVGFHYLNAALVSRGWRALYATVHRAFRSRLPLLPCCTLRGHPQNLHLVTSIKHMASSVPLLAWAFDNGCPRNSVILWSAAARGDLAVLKFAHESDVPWGMDYPWGAAWRATETCSAAAQHGRVEALLWLRDNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRDISSAVQPSVNGFRGPVDRILACVEWVLADGCPCDEETMPYCQHLRERVAREAAAAAEGGSAGRAGSGA
Sbjct:    1 MVIAAFARLWLPIFRYVGFHYLNAALVSRGWRALYATVHRAFRSRLPLLPCCTLRGHPQNLHLVTSIKHMASSVPLLAWAFDNGCPRNSVILWSAAARGDLAVLKFAHESDVPWGMDYPWGAAWRATETCSAAAQHGRVEALLWLRDNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRDISSAVQPSVNGFRGPVDRILACVEWVLADGCPCDEETMPYCQHLRERVAREAAAAAEGGSAGRAGSGA 252
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349867 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YYW1_9STRA4.220e-158100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 73..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_50contigContig_50:710833..712205 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349867mRNA_8943Tribonema minus UTEX_B_3156 mRNAContig_50 710704..712205 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349867|estExt_Genemark1.C_Ctg_500082 ID=Trimin1|349867|estExt_Genemark1.C_Ctg_500082|Name=jgi.p|Trimin1|349867|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=253bp
MVIAAFARLWLPIFRYVGFHYLNAALVSRGWRALYATVHRAFRSRLPLLP
CCTLRGHPQNLHLVTSIKHMASSVPLLAWAFDNGCPRNSVILWSAAARGD
LAVLKFAHESDVPWGMDYPWGAAWRATETCSAAAQHGRVEALLWLRDNGA
PWPATTLCQAALRGGQLDLLHWACAHDCPWGTRDISSAVQPSVNGFRGPV
DRILACVEWVLADGCPCDEETMPYCQHLRERVAREAAAAAEGGSAGRAGS
GA*
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