Trimin1|349849|estExt_Genemark1.C_Ctg_500054 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|349849
Unique Name	Trimin1\|349849\|estExt_Genemark1.C_Ctg_500054
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	679

Homology

[Close]

BLAST of jgi.p|Trimin1|349849 vs. uniprot
Match: A0A836CBI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI9_9STRA)

HSP 1 Score: 993 bits (2568), Expect = 0.000e+0
Identity = 678/678 (100.00%), Postives = 678/678 (100.00%), Query Frame = 0

Query:    1 MSFLDLHSDSAEARQRAYRAATEEYGEALARALHASFSALPDDNSHHWYEWGIALLEAKEEMTAKTADRHIAQKGMVVAAGVSGALLLRGTGPRSLLWSLLSLAFTAEAAATIAARRRLLERARADVKQLVAALXXXXXXXXXXXXXVAAAARMMKCAQAAAMGLRLALPMPPVARMEAAARNRRAALQLPSLRACAAEALQLLRAHVARCTSDVIAATTSAARAGPAXXXXXXXXLPPQQSPGGVLLLAEIADAEAALTEELHQFVLAVARALAASETNVSSLRAAVASVGGCLRSAAERLHAALGXXXXXXXXXXXXELAAAIASLRLSCEAAVVALYRAQVQLASPPAAAHGHXXXXXXXXXXXXXAQLAGVAQLLTAAAHAWTEQQASDLVAALEQARELSAAAXXXXXXXXIPSDAASVGSXXXXXXSGVPSISSAGAHSPPFSLGDSWIPVAQPSSPAAALYSLYESLDEAGMAEPQRSAAAGHXXXXXXXXERESFTDVLVATGGPDASPGREGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSRDELLGELSFALSSRAHALPPPRVKGLQGAPPGSPLNAAHQRSAGVAEGVSGPRLGPEEVAAXXXXXXXXDAPHGGSAQGLMSELRGRLGGEEQGDELVILCGGETDEVGSGSSDGVLVDPRT 678
            MSFLDLHSDSAEARQRAYRAATEEYGEALARALHASFSALPDDNSHHWYEWGIALLEAKEEMTAKTADRHIAQKGMVVAAGVSGALLLRGTGPRSLLWSLLSLAFTAEAAATIAARRRLLERARADVKQLVAALXXXXXXXXXXXXXVAAAARMMKCAQAAAMGLRLALPMPPVARMEAAARNRRAALQLPSLRACAAEALQLLRAHVARCTSDVIAATTSAARAGPAXXXXXXXXLPPQQSPGGVLLLAEIADAEAALTEELHQFVLAVARALAASETNVSSLRAAVASVGGCLRSAAERLHAALGXXXXXXXXXXXXELAAAIASLRLSCEAAVVALYRAQVQLASPPAAAHGHXXXXXXXXXXXXXAQLAGVAQLLTAAAHAWTEQQASDLVAALEQARELSAAAXXXXXXXXIPSDAASVGSXXXXXXSGVPSISSAGAHSPPFSLGDSWIPVAQPSSPAAALYSLYESLDEAGMAEPQRSAAAGHXXXXXXXXERESFTDVLVATGGPDASPGREGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSRDELLGELSFALSSRAHALPPPRVKGLQGAPPGSPLNAAHQRSAGVAEGVSGPRLGPEEVAAXXXXXXXXDAPHGGSAQGLMSELRGRLGGEEQGDELVILCGGETDEVGSGSSDGVLVDPRT
Sbjct:    1 MSFLDLHSDSAEARQRAYRAATEEYGEALARALHASFSALPDDNSHHWYEWGIALLEAKEEMTAKTADRHIAQKGMVVAAGVSGALLLRGTGPRSLLWSLLSLAFTAEAAATIAARRRLLERARADVKQLVAALXXXXXXXXXXXXXVAAAARMMKCAQAAAMGLRLALPMPPVARMEAAARNRRAALQLPSLRACAAEALQLLRAHVARCTSDVIAATTSAARAGPAXXXXXXXXLPPQQSPGGVLLLAEIADAEAALTEELHQFVLAVARALAASETNVSSLRAAVASVGGCLRSAAERLHAALGXXXXXXXXXXXXELAAAIASLRLSCEAAVVALYRAQVQLASPPAAAHGHXXXXXXXXXXXXXAQLAGVAQLLTAAAHAWTEQQASDLVAALEQARELSAAAXXXXXXXXIPSDAASVGSXXXXXXSGVPSISSAGAHSPPFSLGDSWIPVAQPSSPAAALYSLYESLDEAGMAEPQRSAAAGHXXXXXXXXERESFTDVLVATGGPDASPGREGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSRDELLGELSFALSSRAHALPPPRVKGLQGAPPGSPLNAAHQRSAGVAEGVSGPRLGPEEVAAXXXXXXXXDAPHGGSAQGLMSELRGRLGGEEQGDELVILCGGETDEVGSGSSDGVLVDPRT 678

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349849 vs. uniprot

BLAST of jgi.p|Trimin1|349849 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CBI9_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 117..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 659..678
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 504..557
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 530..553
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 571..651

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_50	contig	Contig_50:437121..439157 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349849	mRNA_8914	Tribonema minus UTEX_B_3156	mRNA	Contig_50 436907..439157 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|349849|estExt_Genemark1.C_Ctg_500054 ID=Trimin1|349849|estExt_Genemark1.C_Ctg_500054|Name=jgi.p|Trimin1|349849|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=679bp
MSFLDLHSDSAEARQRAYRAATEEYGEALARALHASFSALPDDNSHHWYE
WGIALLEAKEEMTAKTADRHIAQKGMVVAAGVSGALLLRGTGPRSLLWSL
LSLAFTAEAAATIAARRRLLERARADVKQLVAALERLAGDIESLLAAVAA
AARMMKCAQAAAMGLRLALPMPPVARMEAAARNRRAALQLPSLRACAAEA
LQLLRAHVARCTSDVIAATTSAARAGPAPAPAAAAALPPQQSPGGVLLLA
EIADAEAALTEELHQFVLAVARALAASETNVSSLRAAVASVGGCLRSAAE
RLHAALGGGAAGAAPPPPQELAAAIASLRLSCEAAVVALYRAQVQLASPP
AAAHGHGDAGAAATAAAAAAQLAGVAQLLTAAAHAWTEQQASDLVAALEQ
ARELSAAAAAAPGAAAIPSDAASVGSGDGGGGSGVPSISSAGAHSPPFSL
GDSWIPVAQPSSPAAALYSLYESLDEAGMAEPQRSAAAGHAAAAAAAAER
ESFTDVLVATGGPDASPGREGRRRARSSSSEQRGAASASPQRQRQQQQQR
AAARSRDELLGELSFALSSRAHALPPPRVKGLQGAPPGSPLNAAHQRSAG
VAEGVSGPRLGPEEVAAAAAAAAAADAPHGGSAQGLMSELRGRLGGEEQG
DELVILCGGETDEVGSGSSDGVLVDPRT*