Trimin1|349633|estExt_Genemark1.C_Ctg_460093 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349633
Unique NameTrimin1|349633|estExt_Genemark1.C_Ctg_460093
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length163
Homology
BLAST of jgi.p|Trimin1|349633 vs. uniprot
Match: A0A835YVL1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVL1_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.090e-68
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0
Query:    1 MDDLRSPDKVDRDKMSPGIVYGAASAGAVLGLILSGPLLAVGLGIAGAGAAITQGPGTVGGDIARSAGRLAQNSFDKAKELERKHDVIARVKGASRDGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKAILAGLDKANELLEGKDKKER 162
            MDDLRSPDKVDRDKMSPGIVYGAASAGAVLGLILSGPLLAVGLGIAGAGAAITQGPGTVGGDIARSAGRLAQNSFDKAKELERKHDVIARVKGASRDGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAKAILAGLDKANELLEGKDKKER
Sbjct:    1 MDDLRSPDKVDRDKMSPGIVYGAASAGAVLGLILSGPLLAVGLGIAGAGAAITQGPGTVGGDIARSAGRLAQNSFDKAKELERKHDVIARVKGASRDGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAAKAILAGLDKANELLEGKDKKER 162          
BLAST of jgi.p|Trimin1|349633 vs. uniprot
Match: A0A836CEH6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEH6_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.310e-17
Identity = 47/76 (61.84%), Postives = 54/76 (71.05%), Query Frame = 0
Query:   19 IVYGAASAGAVLGLILSGPLLAVGLGIAGAGAAITQGPGTVGGDIARSAGRLAQNSFDKAKELERKHDVIARVKGA 94
            +V GA  AGAV G +L GPLLAVGLG+AGAG A TQ  GT  GD AR AG+LA N F  A+++ERKH VI R K A
Sbjct:   30 VVLGAGGAGAVAGYMLGGPLLAVGLGVAGAGVAATQPQGTRSGDFARGAGQLAVNGFHAARDVERKHQVIDRFKAA 105          
BLAST of jgi.p|Trimin1|349633 vs. uniprot
Match: D8LTN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN9_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 3.940e-7
Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 0
Query:   13 DKMSPGIVYGAASAGAVLGLILSGPLLAVGLGIAGAGAAITQGPGTVGGDIARSAGRLAQNSFDKAKELERKHDVIARVKGAS 95
            D    G+V GAA  GA  GL+LSGPL+A+GLG   A   + +      GD+ARS G+      +K KE+  ++ V  +VKGA+
Sbjct:   14 DAPPAGVVGGAALVGATTGLLLSGPLVAIGLGAGAAACCLRR---DQAGDVARSTGQAGLAVVEKGKEINTQYGVADKVKGAA 93          
BLAST of jgi.p|Trimin1|349633 vs. uniprot
Match: A0A7S1U135_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U135_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 7.720e-5
Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 0
Query:   19 IVYGAASAGAVLGLILSGPLLAVGLGIAGAGAAITQGPGTVG-GDIARSAGRLAQNSFDKAKELERKHDVIARVK 92
            +V GAA+AGA+ GL++SGP++AV    AGAGAA      +   GD AR+ G      +DKAKE++ ++ +  +VK
Sbjct:   48 VVAGAAAAGAIAGLLVSGPIVAV----AGAGAAAYAATRSDAVGDAARATGAATAAGYDKAKEIDAEYKITDKVK 118          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349633 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YVL1_9STRA2.090e-6899.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEH6_9STRA2.310e-1761.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LTN9_ECTSI3.940e-740.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1U135_9STRA7.720e-542.67Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_46contigContig_46:598924..600013 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349633mRNA_4646Tribonema minus UTEX_B_3156 mRNAContig_46 598870..600017 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349633|estExt_Genemark1.C_Ctg_460093 ID=Trimin1|349633|estExt_Genemark1.C_Ctg_460093|Name=jgi.p|Trimin1|349633|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=163bp
MDDLRSPDKVDRDKMSPGIVYGAASAGAVLGLILSGPLLAVGLGIAGAGA
AITQGPGTVGGDIARSAGRLAQNSFDKAKELERKHDVIARVKGASRDGLD
RVRALNDEHRIVDKTKAGAADLARRARELDEQHGVRDRAAKAILAGLDKA
NELLEGKDKKER*
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