Trimin1|349627|estExt_Genemark1.C_Ctg_460084 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349627
Unique NameTrimin1|349627|estExt_Genemark1.C_Ctg_460084
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length96
Homology
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BLAST of jgi.p|Trimin1|349627 vs. uniprot
Match: A0A836CDT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDT6_9STRA)

HSP 1 Score: 155 bits (391), Expect = 2.430e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 
Query:    1 MTTTLALINSMLLASRNNAQRAGLKYQDLLVEYPAVLQALESAAPATLAARNRRIVRASDVIVKQKPLPQFGRHSVRQALVAAXXXXXXXXAGLA 95
            MTTTLALINSMLLASRNNAQRAGLKYQDLLVEYPAVLQALESAAPATLAARNRRIVRASDVIVKQKPLPQFGRHSVRQALVAAXXXXXXXXAGLA
Sbjct:    1 MTTTLALINSMLLASRNNAQRAGLKYQDLLVEYPAVLQALESAAPATLAARNRRIVRASDVIVKQKPLPQFGRHSVRQALVAAXXXXXXXXAGLA 95
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BLAST of jgi.p|Trimin1|349627 vs. uniprot
Match: A0A835YW04_9STRA (Cytochrome b-c1 complex subunit 7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW04_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.500e-10
Identity = 33/47 (70.21%), Postives = 37/47 (78.72%), Query Frame = 0 
Query:   23 GLKYQDLLVEYPAVLQALESAAPATLAARNRRIVRASDVIVKQKPLP 69
            GLKYQDLL+EY  V  ALE A PA + ARNRR+ RASDV +KQKPLP
Sbjct:   25 GLKYQDLLIEYDDVNTALERADPALVQARNRRLARASDVSLKQKPLP 71
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349627 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CDT6_9STRA2.430e-47100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YW04_9STRA1.500e-1070.21Cytochrome b-c1 complex subunit 7 n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyGENE3D1.10.1090.10coord: 2..79
e-value: 1.4E-8
score: 36.4
IPR036544Cytochrome b-c1 complex subunit 7 superfamilySUPERFAMILY8152414 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 17..70
IPR003197Cytochrome b-c1 complex subunit 7PFAMPF02271UCR_14kDcoord: 19..70
e-value: 9.8E-9
score: 35.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_46contigContig_46:541409..542356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349627mRNA_4637Tribonema minus UTEX_B_3156 mRNAContig_46 541409..542571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349627|estExt_Genemark1.C_Ctg_460084 ID=Trimin1|349627|estExt_Genemark1.C_Ctg_460084|Name=jgi.p|Trimin1|349627|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=96bp
MTTTLALINSMLLASRNNAQRAGLKYQDLLVEYPAVLQALESAAPATLAA
RNRRIVRASDVIVKQKPLPQFGRHSVRQALVAAAAAAAAAAAGLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036544QCR7_sf
IPR003197QCR7