Trimin1|349493|estExt_Genemark1.C_Ctg_440052 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349493
Unique NameTrimin1|349493|estExt_Genemark1.C_Ctg_440052
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length224
Homology
BLAST of jgi.p|Trimin1|349493 vs. uniprot
Match: A0A836CCE7_9STRA (GYF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE7_9STRA)

HSP 1 Score: 426 bits (1095), Expect = 1.580e-150
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
Query:    1 MVKRRQEESEGTFDQDXXXXXXDTNFNEAGEVLEPFNLKNERQEGYFDTNGNFVWKMQDQETDAWLAGLDDAAMEEAIGQAQQAQRLTDLADHLMQRGLTEVYYSTKEALQDMGKDEDEATAGANGHAAQASNSSVQFEYLGKDGQVHGPFSMVQMYSWVSSGYFSGDNVVKMRPITPVGTAPTAAGTEIWMTMKRTNQDKPHLLKHKMQVVSKLALLKEGNG 223
            MVKRRQEESEGTFDQDXXXXXXDTNFNEAGEVLEPFNLKNERQEGYFDTNGNFVWKMQDQETDAWLAGLDDAAMEEAIGQAQQAQRLTDLADHLMQRGLTEVYYSTKEALQDMGKDEDEATAGANGHAAQASNSSVQFEYLGKDGQVHGPFSMVQMYSWVSSGYFSGDNVVKMRPITPVGTAPTAAGTEIWMTMKRTNQDKPHLLKHKMQVVSKLALLKEGNG
Sbjct:    1 MVKRRQEESEGTFDQDXXXXXXDTNFNEAGEVLEPFNLKNERQEGYFDTNGNFVWKMQDQETDAWLAGLDDAAMEEAIGQAQQAQRLTDLADHLMQRGLTEVYYSTKEALQDMGKDEDEATAGANGHAAQASNSSVQFEYLGKDGQVHGPFSMVQMYSWVSSGYFSGDNVVKMRPITPVGTAPTAAGTEIWMTMKRTNQDKPHLLKHKMQVVSKLALLKEGNG 223          
BLAST of jgi.p|Trimin1|349493 vs. uniprot
Match: A0A7S3YEZ5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEZ5_HETAK)

HSP 1 Score: 90.9 bits (224), Expect = 8.650e-19
Identity = 40/61 (65.57%), Postives = 54/61 (88.52%), Query Frame = 0
Query:   26 FNEAGEVLEPFNLKNERQEGYFDTNGNFVWKMQDQETDAWLAGLDDAAMEEAIGQAQQAQR 86
            +N+AGE+LE FNLK++RQ+GYFD +GNFVWK+Q++E DAWLAG+D+  ME AIGQA +AQ+
Sbjct:  122 YNDAGEILESFNLKSDRQDGYFDASGNFVWKLQEKEPDAWLAGMDEHEMESAIGQAAKAQK 182          
BLAST of jgi.p|Trimin1|349493 vs. uniprot
Match: D7G8X8_ECTSI (GYF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X8_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 4.860e-16
Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = 0
Query:   27 NEAGEVLEPFNLKNERQEGYFDTNGNFVWKMQDQETDAWLAGLDDAAMEEAIGQA 81
            NEAG+ +EPFNL+NER  GYFDTNGNFVWK +D E DAWLA +D+ AMEEAIG A
Sbjct:  140 NEAGDPIEPFNLRNERDMGYFDTNGNFVWKQEDGERDAWLAEMDEEAMEEAIGAA 194          
BLAST of jgi.p|Trimin1|349493 vs. uniprot
Match: A0A6H5JI10_9PHAE (GYF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI10_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 3.120e-15
Identity = 38/55 (69.09%), Postives = 46/55 (83.64%), Query Frame = 0
Query:   27 NEAGEVLEPFNLKNERQEGYFDTNGNFVWKMQDQETDAWLAGLDDAAMEEAIGQA 81
            NEAG+ +EPFNL+NER  GY+DTNGNFVWK ++ E DAWLA +D+ AMEEAIG A
Sbjct:  129 NEAGDPIEPFNLRNERDMGYYDTNGNFVWKQENDERDAWLAEMDEEAMEEAIGAA 183          
BLAST of jgi.p|Trimin1|349493 vs. uniprot
Match: A0A812X5W5_SYMMI (Cd2bp2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X5W5_SYMMI)

HSP 1 Score: 74.3 bits (181), Expect = 4.490e-12
Identity = 32/56 (57.14%), Postives = 46/56 (82.14%), Query Frame = 0
Query:   26 FNEAGEVLEPFNLKNERQEGYFDTNGNFVWKMQDQETDAWLAGLDDAAMEEAIGQA 81
            FN+AGEV+EPFNL++ER+ G+FD N N+VW+    E D+WLA +D+A ME++IG+A
Sbjct:   37 FNDAGEVMEPFNLRDEREGGHFDENMNYVWQKDHGEVDSWLADMDEATMEKSIGEA 92          
BLAST of jgi.p|Trimin1|349493 vs. uniprot
Match: A0A7S4EB88_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EB88_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 5.090e-12
Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 0
Query:   26 FNEAGEVLEPFNLKNER-QEGYFDTNGNFVWKMQDQETDAWLAGLDDAAMEEAIGQA 81
            +NE GE +EPFNL+ ER  +G+FD NGNFVWK  D E DAWLA +D+AA E A+G+A
Sbjct:  100 YNEVGERIEPFNLRAERANDGFFDANGNFVWKRGDAEPDAWLASMDEAAEEAAVGEA 156          
BLAST of jgi.p|Trimin1|349493 vs. uniprot
Match: A0A4D9CQJ9_9STRA (GYF domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQJ9_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.580e-11
Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 0
Query:   26 FNEAGEVLEPFNLKNERQEGYFDTNGNFVWKMQDQETDAWLAGLDDAA-MEEAIGQAQQAQRLTDLAD 92
            FNEAG+ +EPFNLKNER EG+FD  GNFVWK ++   DAWLA L++   +E  IG+A  A++  D  D
Sbjct:   57 FNEAGDKMEPFNLKNERTEGFFDETGNFVWKKEEGGEDAWLASLENEEDLEARIGEAAVARKKKDDED 124          
BLAST of jgi.p|Trimin1|349493 vs. uniprot
Match: A0A7S3M4V8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4V8_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.190e-9
Identity = 30/55 (54.55%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   30 GEVLEPFNLKNERQEGYFDTNGNFVWKMQDQETDAWLAGLDDAAMEEAIGQAQQA 84
            GEV+E FNL +ER+ G+FD N N+V+K +  E DAW+A +D+ AME+AIG+A +A
Sbjct:    1 GEVIEAFNLADEREGGHFDENMNYVFKKEKGEVDAWVAEMDEVAMEQAIGEAAKA 55          
BLAST of jgi.p|Trimin1|349493 vs. uniprot
Match: A0A482SSZ3_9ARCH (GYF domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SSZ3_9ARCH)

HSP 1 Score: 64.7 bits (156), Expect = 1.220e-8
Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 0
Query:   33 LEPFNLKNERQEGYFDTNGNFVWKMQDQETDAWLAGLDDAAMEEAIGQAQQAQR 86
            +EPFNLKNER+ G+FD N N+V+K +  E DAW+AGL +A ME AIG+A  A++
Sbjct:    1 MEPFNLKNEREGGFFDENMNYVFKKEVGEMDAWVAGLSEAEMEAAIGEAALAEK 54          
BLAST of jgi.p|Trimin1|349493 vs. uniprot
Match: UPI0019298CCD (LOW QUALITY PROTEIN: CD2 antigen cytoplasmic tail-binding protein 2 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0019298CCD)

HSP 1 Score: 56.6 bits (135), Expect = 7.430e-6
Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 0
Query:   24 TNFNEAGEVLEPFNLKNERQEGYFDTNGNFV-WKMQDQETDAWLAGLD 70
            TNF + G  +EPFNLK ER+EGYFD NGNFV +  Q+Q  DAWL  L+
Sbjct:   99 TNFVDDGIQIEPFNLKQEREEGYFDANGNFVEYATQNQIKDAWLDNLE 146          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349493 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CCE7_9STRA1.580e-150100.00GYF domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3YEZ5_HETAK8.650e-1965.57Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D7G8X8_ECTSI4.860e-1672.73GYF domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JI10_9PHAE3.120e-1569.09GYF domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A812X5W5_SYMMI4.490e-1257.14Cd2bp2 protein (Fragment) n=1 Tax=Symbiodinium mic... [more]
A0A7S4EB88_9STRA5.090e-1261.40Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A4D9CQJ9_9STRA2.580e-1154.41GYF domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S3M4V8_9STRA2.190e-954.55Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A482SSZ3_9ARCH1.220e-857.41GYF domain-containing protein n=1 Tax=archaeon Tax... [more]
UPI0019298CCD7.430e-660.42LOW QUALITY PROTEIN: CD2 antigen cytoplasmic tail-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003169GYF domainSMARTSM00444gyf_5coord: 136..200
e-value: 1.8E-5
score: 34.1
IPR003169GYF domainPFAMPF02213GYFcoord: 138..172
e-value: 1.3E-9
score: 37.5
IPR003169GYF domainPROSITEPS50829GYFcoord: 135..180
score: 11.273447
IPR035445GYF-like domain superfamilyGENE3D3.30.1490.40coord: 122..216
e-value: 3.3E-11
score: 44.9
IPR035445GYF-like domain superfamilySUPERFAMILY55277GYF domaincoord: 131..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..28
IPR039905CD2 antigen cytoplasmic tail-binding protein 2/Lin1PANTHERPTHR13138PROTEIN LIN1coord: 9..84
coord: 82..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_44contigContig_44:735659..743033 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349493mRNA_9114Tribonema minus UTEX_B_3156 mRNAContig_44 735659..743033 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349493|estExt_Genemark1.C_Ctg_440052 ID=Trimin1|349493|estExt_Genemark1.C_Ctg_440052|Name=jgi.p|Trimin1|349493|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=224bp
MVKRRQEESEGTFDQDDDDDEEDTNFNEAGEVLEPFNLKNERQEGYFDTN
GNFVWKMQDQETDAWLAGLDDAAMEEAIGQAQQAQRLTDLADHLMQRGLT
EVYYSTKEALQDMGKDEDEATAGANGHAAQASNSSVQFEYLGKDGQVHGP
FSMVQMYSWVSSGYFSGDNVVKMRPITPVGTAPTAAGTEIWMTMKRTNQD
KPHLLKHKMQVVSKLALLKEGNG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003169GYF
IPR035445GYF-like_dom_sf
IPR039905CD2BP2/Lin1