Homology
BLAST of jgi.p|Trimin1|349476 vs. uniprot
Match:
A0A835YSS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSS1_9STRA)
HSP 1 Score: 1253 bits (3241), Expect = 0.000e+0
Identity = 1060/1060 (100.00%), Postives = 1060/1060 (100.00%), Query Frame = 0
Query: 1 MGEKGSSYDLFGVPHQDSGDEAMDDGSTDKVRSAAEALQLKYGLGRDTAEEKGEAPKAASARAAALRKSAGGGGADSILQLAEESHAAAEAALXXXXXXXXXEXXDXXXXXXXXXXXXXXXXXXXXRLRPNARAKLKRAKQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTERDSDGDIGMDAXXXXXXXXXXXXXXXXXXXXXXGGGEGMEEGGEXXXXXXXXXXXXVQYAVARQVGRDTAPEILALAKKRLSGWALKFTKPRMVVPDLPPEQPPMRDDYLELFGRHLLAEASFSETFGAKPAERLEGEDGKGEREGGGSSDEGGDLDLDFDTPSHSKSAPRQPRGRDDERGRTVVASNLPYTMCEVKYMRQIFEAVDDREGEESSVXXXXXXXXXXXXXXXXXSSMFEXXXXXXXXXSNYPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKDVIIHRHNIGNRASGFVTVVFTTAEAAHAAVKLNGMDVGGRAMYTKLVAPAARPFRPPSRYFLEPDGKAALAAFRRYRPYVHRHLHEVIITLGVGFVVISIDSRALLLVVAAALVDGRALLRESAPKGSSKVCIKCRQTGHFAKDCTAEASDIXXXXXXXXXXXXXXXXLDAVCRTCFTYGHKAHSXXXXXXXXXXXXXXXXXSCRNNENISTMLCFRCLLRGCGGDAAPCSNGRNERGLDLTLRAVIKDPPPVNAEGKPVYGPTPGTEKLRCITCGQVGHVRCGGVDADTLQQLRPYASCYGCGEMGHPNTECPALWPRGDHRSAQSAGRRSTSQQQRLQRRQSAPADLPRANSHIVFTEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYAPRGAYRGAPGEYDQPXXXXXXXXXLLPPHQQGFDFAHAPPMGYGAPVFRRDSGGGXXXXXXXXRSSYESYRGDRGDSYRRR 1060
MGEKGSSYDLFGVPHQDSGDEAMDDGSTDKVRSAAEALQLKYGLGRDTAEEKGEAPKAASARAAALRKSAGGGGADSILQLAEESHAAAEAALXXXXXXXXXEXXDXXXXXXXXXXXXXXXXXXXXRLRPNARAKLKRAKQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTERDSDGDIGMDAXXXXXXXXXXXXXXXXXXXXXXGGGEGMEEGGEXXXXXXXXXXXXVQYAVARQVGRDTAPEILALAKKRLSGWALKFTKPRMVVPDLPPEQPPMRDDYLELFGRHLLAEASFSETFGAKPAERLEGEDGKGEREGGGSSDEGGDLDLDFDTPSHSKSAPRQPRGRDDERGRTVVASNLPYTMCEVKYMRQIFEAVDDREGEESSVXXXXXXXXXXXXXXXXXSSMFEXXXXXXXXXSNYPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKDVIIHRHNIGNRASGFVTVVFTTAEAAHAAVKLNGMDVGGRAMYTKLVAPAARPFRPPSRYFLEPDGKAALAAFRRYRPYVHRHLHEVIITLGVGFVVISIDSRALLLVVAAALVDGRALLRESAPKGSSKVCIKCRQTGHFAKDCTAEASDIXXXXXXXXXXXXXXXXLDAVCRTCFTYGHKAHSXXXXXXXXXXXXXXXXXSCRNNENISTMLCFRCLLRGCGGDAAPCSNGRNERGLDLTLRAVIKDPPPVNAEGKPVYGPTPGTEKLRCITCGQVGHVRCGGVDADTLQQLRPYASCYGCGEMGHPNTECPALWPRGDHRSAQSAGRRSTSQQQRLQRRQSAPADLPRANSHIVFTEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYAPRGAYRGAPGEYDQPXXXXXXXXXLLPPHQQGFDFAHAPPMGYGAPVFRRDSGGGXXXXXXXXRSSYESYRGDRGDSYRRR
Sbjct: 1 MGEKGSSYDLFGVPHQDSGDEAMDDGSTDKVRSAAEALQLKYGLGRDTAEEKGEAPKAASARAAALRKSAGGGGADSILQLAEESHAAAEAALXXXXXXXXXEXXDXXXXXXXXXXXXXXXXXXXXRLRPNARAKLKRAKQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTERDSDGDIGMDAXXXXXXXXXXXXXXXXXXXXXXGGGEGMEEGGEXXXXXXXXXXXXVQYAVARQVGRDTAPEILALAKKRLSGWALKFTKPRMVVPDLPPEQPPMRDDYLELFGRHLLAEASFSETFGAKPAERLEGEDGKGEREGGGSSDEGGDLDLDFDTPSHSKSAPRQPRGRDDERGRTVVASNLPYTMCEVKYMRQIFEAVDDREGEESSVXXXXXXXXXXXXXXXXXSSMFEXXXXXXXXXSNYPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKDVIIHRHNIGNRASGFVTVVFTTAEAAHAAVKLNGMDVGGRAMYTKLVAPAARPFRPPSRYFLEPDGKAALAAFRRYRPYVHRHLHEVIITLGVGFVVISIDSRALLLVVAAALVDGRALLRESAPKGSSKVCIKCRQTGHFAKDCTAEASDIXXXXXXXXXXXXXXXXLDAVCRTCFTYGHKAHSXXXXXXXXXXXXXXXXXSCRNNENISTMLCFRCLLRGCGGDAAPCSNGRNERGLDLTLRAVIKDPPPVNAEGKPVYGPTPGTEKLRCITCGQVGHVRCGGVDADTLQQLRPYASCYGCGEMGHPNTECPALWPRGDHRSAQSAGRRSTSQQQRLQRRQSAPADLPRANSHIVFTEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYAPRGAYRGAPGEYDQPXXXXXXXXXLLPPHQQGFDFAHAPPMGYGAPVFRRDSGGGXXXXXXXXRSSYESYRGDRGDSYRRR 1060
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349476 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M G E K G S S Y D L F G V P H Q D S G D E A M D D G S T D K V R S A A E A L Q L K Y G L G R D T A E E K G E A P K A A S A R A A A L R K S A G G G G A D S I L Q L A E E S H A A A E A A L A A A A A A A A A E A A D A D A N G E D N G A Q R K G A R K K K A R L R P N A R A K L K R A K Q A A A A A A A A A E R G D N S E D D D G E E E E S E A S G P P P R T A P P A A G K R R K K Q K L D G A A S D Q S S R S N S K S P V P M A S L E A A A A E A A A A A A A A A A A A A A G M E V A E G G G G G A A K K P A L S K R A Q Q R E R R R I A E A A A A A K A L A A S D N G G G G S T E R D S D G D I G M D A D V E M E D E G I S V A A A A T A A L A V A G G G E G M E E G G E G E G G D G G E G G E G V Q Y A V A R Q V G R D T A P E I L A L A K K R L S G W A L K F T K P R M V V P D L P P E Q P P M R D D Y L E L F G R H L L A E A S F S E T F G A K P A E R L E G E D G K G E R E G G G S S D E G G D L D L D F D T P S H S K S A P R Q P R G R D D E R G R T V V A S N L P Y T M C E V K Y M R Q I F E A V D D R E G E E S S V K N M R Q I F E A V D D R E G E E S S M F E A V T N R K G E E S N Y P R Q M F E A V N D G E G Q E S S M F E A V N H C E G A E S S V K D V I I H R H N I G N R A S G F V T V V F T T A E A A H A A V K L N G M D V G G R A M Y T K L V A P A A R P F R P P S R Y F L E P D G K A A L A A F R R Y R P Y V H R H L H E V I I T L G V G F V V I S I D S R A L L L V V A A A L V D G R A L L R E S A P K G S S K V C I K C R Q T G H F A K D C T A E A S D I L C G I C A E K G H D K R D C P L D A V C R T C F T Y G H K A H S P L D A V C R L C S T Y G H K A H S C R N N E N I S T M L C F R C L L R G C G G D A A P C S N G R N E R G L D L T L R A V I K D P P P V N A E G K P V Y G P T P G T E K L R C I T C G Q V G H V R C G G V D A D T L Q Q L R P Y A S C Y G C G E M G H P N T E C P A L W P R G D H R S A Q S A G R R S T S Q Q Q R L Q R R Q S A P A D L P R A N S H I V F T E G G A A A P A P P P H Y R G G F P G G G G A F N D D F G G G M S R H S S G A S L A R H S S G G G G G Y A P R G A Y R G A P G E Y D Q P P P P Y G A P P P L L P P H Q Q G F D F A H A P P M G Y G A P V F R R D S G G G G G G G Y G G G R S S Y E S Y R G D R G D S Y R R R * 100 200 300 400 500 600 700 800 900 1000 Expect = 0.00e+0 / Id = 100.00 Sequence A0A835YSS1_9STRA
Match Name E-value Identity Description
A0A835YSS1_9STRA 0.000e+0 100.00 Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M G E K G S S Y D L F G V P H Q D S G D E A M D D G S T D K V R S A A E A L Q L K Y G L G R D T A E E K G E A P K A A S A R A A A L R K S A G G G G A D S I L Q L A E E S H A A A E A A L A A A A A A A A A E A A D A D A N G E D N G A Q R K G A R K K K A R L R P N A R A K L K R A K Q A A A A A A A A A E R G D N S E D D D G E E E E S E A S G P P P R T A P P A A G K R R K K Q K L D G A A S D Q S S R S N S K S P V P M A S L E A A A A E A A A A A A A A A A A A A A G M E V A E G G G G G A A K K P A L S K R A Q Q R E R R R I A E A A A A A K A L A A S D N G G G G S T E R D S D G D I G M D A D V E M E D E G I S V A A A A T A A L A V A G G G E G M E E G G E G E G G D G G E G G E G V Q Y A V A R Q V G R D T A P E I L A L A K K R L S G W A L K F T K P R M V V P D L P P E Q P P M R D D Y L E L F G R H L L A E A S F S E T F G A K P A E R L E G E D G K G E R E G G G S S D E G G D L D L D F D T P S H S K S A P R Q P R G R D D E R G R T V V A S N L P Y T M C E V K Y M R Q I F E A V D D R E G E E S S V K N M R Q I F E A V D D R E G E E S S M F E A V T N R K G E E S N Y P R Q M F E A V N D G E G Q E S S M F E A V N H C E G A E S S V K D V I I H R H N I G N R A S G F V T V V F T T A E A A H A A V K L N G M D V G G R A M Y T K L V A P A A R P F R P P S R Y F L E P D G K A A L A A F R R Y R P Y V H R H L H E V I I T L G V G F V V I S I D S R A L L L V V A A A L V D G R A L L R E S A P K G S S K V C I K C R Q T G H F A K D C T A E A S D I L C G I C A E K G H D K R D C P L D A V C R T C F T Y G H K A H S P L D A V C R L C S T Y G H K A H S C R N N E N I S T M L C F R C L L R G C G G D A A P C S N G R N E R G L D L T L R A V I K D P P P V N A E G K P V Y G P T P G T E K L R C I T C G Q V G H V R C G G V D A D T L Q Q L R P Y A S C Y G C G E M G H P N T E C P A L W P R G D H R S A Q S A G R R S T S Q Q Q R L Q R R Q S A P A D L P R A N S H I V F T E G G A A A P A P P P H Y R G G F P G G G G A F N D D F G G G M S R H S S G A S L A R H S S G G G G G Y A P R G A Y R G A P G E Y D Q P P P P Y G A P P P L L P P H Q Q G F D F A H A P P M G Y G A P V F R R D S G G G G G G G Y G G G R S S Y E S Y R G D R G D S Y R R R * 100 200 300 400 500 600 700 800 900 1000 Expect = 0.0013 / Score = 28.0 Expect = 0.69 / Score = 12.2 Expect = 0.76 / Score = 11.9 Expect = 45.0 / Score = 1.0 Expect = 0.073 / Score = 18.2 Score = 8.515406 Score = 9.356029 Score = 9.652719 Expect = 1.6E-8 / Score = 36.5 Expect = 7.7E-10 / Score = 40.4 Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence SM00343 PS50158 PS50158 PS50158 G3DSA:3.30.70.330 G3DSA:4.10.60.10 mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite PTHR46978 PTHR46978:SF1 SSF54928 SSF57756 SSF57756
IPR Term IPR Description Source Source Term Source Description Alignment
IPR001878 Zinc finger, CCHC-type SMART SM00343 c2hcfinal6 coord: 698..714 IPR001878 Zinc finger, CCHC-type PROSITE PS50158 ZF_CCHC coord: 721..735 IPR001878 Zinc finger, CCHC-type PROSITE PS50158 ZF_CCHC coord: 699..712 IPR001878 Zinc finger, CCHC-type PROSITE PS50158 ZF_CCHC coord: 867..881 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily GENE3D 3.30.70.330 coord: 444..611 None No IPR available GENE3D 4.10.60.10 coord: 687..739 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 881..1060 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 120..136 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 193..207 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 441..466 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 317..340 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 990..1008 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 894..910 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 250..264 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 414..434 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 411..466 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..297 None No IPR available PANTHER PTHR46978 ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN coord: 684..883 None No IPR available PANTHER PTHR46978:SF1 ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN coord: 684..883 IPR035979 RNA-binding domain superfamily SUPERFAMILY 54928 RNA-binding domain, RBD coord: 564..626 IPR036875 Zinc finger, CCHC-type superfamily SUPERFAMILY 57756 Retrovirus zinc finger-like domains coord: 831..882 IPR036875 Zinc finger, CCHC-type superfamily SUPERFAMILY 57756 Retrovirus zinc finger-like domains coord: 693..736
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>Trimin1|349476|estExt_Genemark1.C_Ctg_440022 ID=Trimin1|349476|estExt_Genemark1.C_Ctg_440022|Name=jgi.p|Trimin1|349476|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1061bp back to top
Annotated Terms
The following terms have been associated with this polypeptide: