Trimin1|349447|estExt_Genemark1.C_Ctg_430025 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349447
Unique NameTrimin1|349447|estExt_Genemark1.C_Ctg_430025
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1263
Homology
BLAST of jgi.p|Trimin1|349447 vs. uniprot
Match: A0A836CBW6_9STRA (CRC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBW6_9STRA)

HSP 1 Score: 1931 bits (5002), Expect = 0.000e+0
Identity = 1262/1262 (100.00%), Postives = 1262/1262 (100.00%), Query Frame = 0
Query:    1 MGFASPPGVHAPSARSAAQGGGAQPGPLKKQNSLVAELALTQHRQQQRWQLRSSNGGAMHSAMPAPAQPRVRNEDVMAAPGGGAMGGPNREAQTPSRHSYDSPTGSPRRGPARGVAEDGEIPXXXXXXXXXXXXXWGLMDMKSPKNVTAELTLLQPLAAQGXXXXXXXKNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLEFADHQRETPPSTPIKSNGRGGGAFNPFNTVVGDAMSYSHXXXXXXXXXXXXXXXXXXXXXTPPGPHPGMLSPGMCSPSLFFAMTPNANGSAMSPMNTSLLLGGDDSVRTPVAARLAQRGXXXXXSDGVLEGGDPGYRSGSSXXXXXXXXXXXXXXXXXXQSSSGGDXXXXXXXXXXXXXXXXXXXXSPICNEAALGPEGSIGTTRRTRSSMRKGAAAAAAPATPKALKSNGHSASTPDANRINTLVHALVAETPGTSDTSSGSRGGPPQTPEGERYHLLSDRGSGGGGGMSPGFISPMRLDHLGSPVPAVPAGSPVKAPQQQQELSAGEEQAWDETAAAATXXXXDAHETAAAAAEIAAIRAEAGVRGAGMGMGMVGNPGWRVTDKEAEVVLGGPFVPQMLAIINSRIWGADEPDPTELSECLTAGTVREATGLSSAHRKTTIYFGRGVTGGTIALSGAVTHGQRCRSEALLSSFTVEGGVARTASDAASHPYATSTAEHFDERPALPARSSARHSDGGSGSKRGRGRGLLPGLLEAPGSDAKKSRATPPSSAPRSILKQELASPSQLARPPRMSLCSPPPPTPKKRPRVSISSAEPSVQQFGKEPPIAVEQLQPPXXXXXXXXXXXXXXXSCNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKNRSSVEQATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSECGGGTAFRXXXXXXXXXXXXXXXXXLRPRLYIATTXXXXXXXXXXXXXXXVAHIQQPPFSNLNYHPAAPHALLTAEDEAAAAEAAAGSLGAYFPGTPLVGIGTSNDARGYADESPLPTFIGDLGGPIEGTSXXXXXXXXGVLKENSSSVAERNRSRSASPTELKLTLLPLRQRRWDAACTPVQRDRYCRPFGRQPRLLMYRGSMVNVLSFLNNADLAAAARVAKSWSNFAANAALWEDAPTDAAPPL 1262
            MGFASPPGVHAPSARSAAQGGGAQPGPLKKQNSLVAELALTQHRQQQRWQLRSSNGGAMHSAMPAPAQPRVRNEDVMAAPGGGAMGGPNREAQTPSRHSYDSPTGSPRRGPARGVAEDGEIPXXXXXXXXXXXXXWGLMDMKSPKNVTAELTLLQPLAAQGXXXXXXXKNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLEFADHQRETPPSTPIKSNGRGGGAFNPFNTVVGDAMSYSHXXXXXXXXXXXXXXXXXXXXXTPPGPHPGMLSPGMCSPSLFFAMTPNANGSAMSPMNTSLLLGGDDSVRTPVAARLAQRGXXXXXSDGVLEGGDPGYRSGSSXXXXXXXXXXXXXXXXXXQSSSGGDXXXXXXXXXXXXXXXXXXXXSPICNEAALGPEGSIGTTRRTRSSMRKGAAAAAAPATPKALKSNGHSASTPDANRINTLVHALVAETPGTSDTSSGSRGGPPQTPEGERYHLLSDRGSGGGGGMSPGFISPMRLDHLGSPVPAVPAGSPVKAPQQQQELSAGEEQAWDETAAAATXXXXDAHETAAAAAEIAAIRAEAGVRGAGMGMGMVGNPGWRVTDKEAEVVLGGPFVPQMLAIINSRIWGADEPDPTELSECLTAGTVREATGLSSAHRKTTIYFGRGVTGGTIALSGAVTHGQRCRSEALLSSFTVEGGVARTASDAASHPYATSTAEHFDERPALPARSSARHSDGGSGSKRGRGRGLLPGLLEAPGSDAKKSRATPPSSAPRSILKQELASPSQLARPPRMSLCSPPPPTPKKRPRVSISSAEPSVQQFGKEPPIAVEQLQPPXXXXXXXXXXXXXXXSCNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKNRSSVEQATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSECGGGTAFRXXXXXXXXXXXXXXXXXLRPRLYIATTXXXXXXXXXXXXXXXVAHIQQPPFSNLNYHPAAPHALLTAEDEAAAAEAAAGSLGAYFPGTPLVGIGTSNDARGYADESPLPTFIGDLGGPIEGTSXXXXXXXXGVLKENSSSVAERNRSRSASPTELKLTLLPLRQRRWDAACTPVQRDRYCRPFGRQPRLLMYRGSMVNVLSFLNNADLAAAARVAKSWSNFAANAALWEDAPTDAAPPL
Sbjct:    1 MGFASPPGVHAPSARSAAQGGGAQPGPLKKQNSLVAELALTQHRQQQRWQLRSSNGGAMHSAMPAPAQPRVRNEDVMAAPGGGAMGGPNREAQTPSRHSYDSPTGSPRRGPARGVAEDGEIPXXXXXXXXXXXXXWGLMDMKSPKNVTAELTLLQPLAAQGXXXXXXXKNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLEFADHQRETPPSTPIKSNGRGGGAFNPFNTVVGDAMSYSHXXXXXXXXXXXXXXXXXXXXXTPPGPHPGMLSPGMCSPSLFFAMTPNANGSAMSPMNTSLLLGGDDSVRTPVAARLAQRGXXXXXSDGVLEGGDPGYRSGSSXXXXXXXXXXXXXXXXXXQSSSGGDXXXXXXXXXXXXXXXXXXXXSPICNEAALGPEGSIGTTRRTRSSMRKGAAAAAAPATPKALKSNGHSASTPDANRINTLVHALVAETPGTSDTSSGSRGGPPQTPEGERYHLLSDRGSGGGGGMSPGFISPMRLDHLGSPVPAVPAGSPVKAPQQQQELSAGEEQAWDETAAAATXXXXDAHETAAAAAEIAAIRAEAGVRGAGMGMGMVGNPGWRVTDKEAEVVLGGPFVPQMLAIINSRIWGADEPDPTELSECLTAGTVREATGLSSAHRKTTIYFGRGVTGGTIALSGAVTHGQRCRSEALLSSFTVEGGVARTASDAASHPYATSTAEHFDERPALPARSSARHSDGGSGSKRGRGRGLLPGLLEAPGSDAKKSRATPPSSAPRSILKQELASPSQLARPPRMSLCSPPPPTPKKRPRVSISSAEPSVQQFGKEPPIAVEQLQPPXXXXXXXXXXXXXXXSCNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKNRSSVEQATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSECGGGTAFRXXXXXXXXXXXXXXXXXLRPRLYIATTXXXXXXXXXXXXXXXVAHIQQPPFSNLNYHPAAPHALLTAEDEAAAAEAAAGSLGAYFPGTPLVGIGTSNDARGYADESPLPTFIGDLGGPIEGTSXXXXXXXXGVLKENSSSVAERNRSRSASPTELKLTLLPLRQRRWDAACTPVQRDRYCRPFGRQPRLLMYRGSMVNVLSFLNNADLAAAARVAKSWSNFAANAALWEDAPTDAAPPL 1262          
BLAST of jgi.p|Trimin1|349447 vs. uniprot
Match: A0A7S0RP90_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RP90_9CHLO)

HSP 1 Score: 126 bits (316), Expect = 3.520e-28
Identity = 65/128 (50.78%), Postives = 80/128 (62.50%), Query Frame = 0
Query:  836 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKNRSSVEQ 963
            CNCK SRCLKLYCECF     C   CNC NC+N  E E  R++A+ A +ERNP AF+ K+Q       AA  +L  P A + G+  S    CK+SACLK+YCEC+Q G FC++ CKC  CKN    EQ
Sbjct:   17 CNCKNSRCLKLYCECFASGRYCD-GCNCSNCYNNRENEHVRMSAVEAILERNPNAFRPKIQAQEEVVAAA-PRLAAPPADAGGK-HSKGCNCKKSACLKKYCECFQAGVFCSDSCKCVECKNYEGSEQ 141          
BLAST of jgi.p|Trimin1|349447 vs. uniprot
Match: A0A7S3YLM9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLM9_HETAK)

HSP 1 Score: 115 bits (289), Expect = 9.990e-26
Identity = 60/122 (49.18%), Postives = 72/122 (59.02%), Query Frame = 0
Query:  836 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKN 957
            CNCKKS+CLKLYCECF   + CG ACNC +C N   TEA+R  AI A +ERNP AF +K+   AL                  Q  S    CK+S+CLK+YCEC+Q G  C+ RCKC  C N
Sbjct:   46 CNCKKSKCLKLYCECFAAGKYCG-ACNCVDCQNAPATEAQRQDAIKAILERNPKAFSSKINREAL----------------HKQHHSTGCNCKKSSCLKKYCECFQAGVPCSARCKCAACLN 150          
BLAST of jgi.p|Trimin1|349447 vs. uniprot
Match: A0A8C7XQT5_9TELE (Lin-54 DREAM MuvB core complex component n=1 Tax=Oryzias sinensis TaxID=183150 RepID=A0A8C7XQT5_9TELE)

HSP 1 Score: 117 bits (293), Expect = 1.330e-25
Identity = 64/134 (47.76%), Postives = 77/134 (57.46%), Query Frame = 0
Query:  836 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGD---SPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKN-RSSVEQAT 965
            CNC KS+CLKLYC+CF   E C   CNC NC N +E E ERL AI  C++RNP AFK K+           GK +      +G+ D   S    CKRS CLK YCECY+    C++ CKC GCKN   S E+ T
Sbjct:   21 CNCTKSQCLKLYCDCFANGEFCN-MCNCNNCFNNLEHETERLKAIKTCLDRNPEAFKPKI-----------GKGK------EGESDRRHSKGCNCKRSGCLKNYCECYEAKIMCSSICKCIGCKNFEESPERKT 136          
BLAST of jgi.p|Trimin1|349447 vs. uniprot
Match: A0A7S3AJR0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AJR0_9EUKA)

HSP 1 Score: 115 bits (287), Expect = 1.960e-25
Identity = 59/127 (46.46%), Postives = 76/127 (59.84%), Query Frame = 0
Query:  836 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKNRSSVE 962
            CNCK SRCLKLYCECF   + C  ACNCQ+CHN  E + +R  AI + +ERNP AF+ K+      AG  L +             +    C++S+CLK+YCEC+QGG  CT  CKC GCKN   ++
Sbjct:    7 CNCKNSRCLKLYCECFASGQYCL-ACNCQSCHNNPENDDKRKRAIKSTLERNPQAFRPKIN----HAGDTLRR------------HTRGCHCRKSSCLKKYCECFQGGIKCTAMCKCAGCKNYEDLD 116          
BLAST of jgi.p|Trimin1|349447 vs. uniprot
Match: A7SAT6_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SAT6_NEMVE)

HSP 1 Score: 115 bits (289), Expect = 2.790e-25
Identity = 65/134 (48.51%), Postives = 77/134 (57.46%), Query Frame = 0
Query:  836 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGD---SPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKN-RSSVEQAT 965
            CNC KS+CLKLYC+CF + E C   CNC NC N IE E ER  AI AC+ERNP AF  K+           GK +V      G+ +   +    CKRS CLK YCECY+    CT+ CKC GCKN   S E+ T
Sbjct:    7 CNCTKSQCLKLYCDCFAQGEFCSN-CNCVNCSNNIEHERERSKAIKACLERNPHAFHPKI-----------GKGKV------GESERRHNKGCHCKRSGCLKNYCECYEAKILCTSLCKCTGCKNFEESPERKT 122          
BLAST of jgi.p|Trimin1|349447 vs. uniprot
Match: UPI0018851BD6 (LOW QUALITY PROTEIN: protein lin-54 homolog n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018851BD6)

HSP 1 Score: 116 bits (290), Expect = 3.420e-25
Identity = 58/126 (46.03%), Postives = 74/126 (58.73%), Query Frame = 0
Query:  836 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKNRSSV 961
            CNC KS+CLKLYC+CF   E C   CNC NC+N+++ E ER  AI +C++RNP AFK K+           GK    T     +       CK+S CLK YCECY+   FC+++CKC GCKN  S 
Sbjct:   30 CNCTKSQCLKLYCDCFASGEFCNN-CNCTNCYNSLDHEEERQRAIRSCLDRNPYAFKPKI-----------GKSDNET-----RKHQKGCNCKKSGCLKNYCECYEAKIFCSSQCKCMGCKNHESA 138          
BLAST of jgi.p|Trimin1|349447 vs. uniprot
Match: A0A1R2CI72_9CILI (CRC domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CI72_9CILI)

HSP 1 Score: 117 bits (292), Expect = 3.480e-25
Identity = 58/122 (47.54%), Postives = 75/122 (61.48%), Query Frame = 0
Query:  836 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKN 957
            C C KS+CLK+YCECF R   C   CNC NCHNT+E E  R  A+++ +ERNP AFK+K+          +G+ +  +  SKG        C +SACLK YCEC+Q  A CT+ C+C GCKN
Sbjct:  146 CTCPKSKCLKMYCECFSRGNYCD-GCNCVNCHNTLEYENIRREAVSSLLERNPNAFKSKISTV-------VGEGEELSVHSKG------CHCTKSACLKNYCECFQNSAVCTDMCQCTGCKN 253          
BLAST of jgi.p|Trimin1|349447 vs. uniprot
Match: A0A2L2YNU1_PARTP (Protein lin-54-like protein (Fragment) n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YNU1_PARTP)

HSP 1 Score: 115 bits (289), Expect = 3.800e-25
Identity = 65/138 (47.10%), Postives = 77/138 (55.80%), Query Frame = 0
Query:  836 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPP-------LQCKRSACLKRYCECYQGGAFCTNRCKCDGCKN-RSSVEQAT 965
            CNC KS+CLKLYC+CF   E C  +CNC NC+N +  E ER  AI AC++RNP AF  K+           GK +V      G G+S           CKRS CLK YCECY+    CTN CKC GCKN   S E+ T
Sbjct:   12 CNCTKSQCLKLYCDCFANGEFCN-SCNCTNCYNNLSHEEERQKAIKACLDRNPYAFHPKI-----------GKSRV------GGGNSDQERRHTKGCNCKRSYCLKNYCECYEAKILCTNLCKCVGCKNFEDSSERKT 131          
BLAST of jgi.p|Trimin1|349447 vs. uniprot
Match: A0A7S3CVV7_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3CVV7_9EUKA)

HSP 1 Score: 122 bits (307), Expect = 4.320e-25
Identity = 60/130 (46.15%), Postives = 73/130 (56.15%), Query Frame = 0
Query:  836 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKNRSSVEQAT 965
            CNCK SRCLKLYCECF     C   CNCQNCHN      ER+A I   +ER+P AFK K++   +  GA  G   V              +CK+S C K+YCEC+Q G  CT+RCKC+ C N   V + T
Sbjct:  132 CNCKNSRCLKLYCECFAAGRMCTVECNCQNCHNCDSHNGERMAVINTILERDPNAFKPKVKRGVVQGGAGEGGGAVVPGGDDQHVHIKGCRCKKSGCTKKYCECFQAGVKCTDRCKCEKCHNPHGVREKT 261          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349447 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBW6_9STRA0.000e+0100.00CRC domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S0RP90_9CHLO3.520e-2850.78Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A7S3YLM9_HETAK9.990e-2649.18Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8C7XQT5_9TELE1.330e-2547.76Lin-54 DREAM MuvB core complex component n=1 Tax=O... [more]
A0A7S3AJR0_9EUKA1.960e-2546.46Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A7SAT6_NEMVE2.790e-2548.51Predicted protein (Fragment) n=1 Tax=Nematostella ... [more]
UPI0018851BD63.420e-2546.03LOW QUALITY PROTEIN: protein lin-54 homolog n=1 Ta... [more]
A0A1R2CI72_9CILI3.480e-2547.54CRC domain-containing protein n=1 Tax=Stentor coer... [more]
A0A2L2YNU1_PARTP3.800e-2547.10Protein lin-54-like protein (Fragment) n=1 Tax=Par... [more]
A0A7S3CVV7_9EUKA4.320e-2546.15Hypothetical protein n=2 Tax=Palpitomonas bilix Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033467Tesmin/TSO1-like CXC domainSMARTSM01114CXC_2coord: 831..872
e-value: 1.1E-10
score: 51.5
coord: 920..961
e-value: 6.2E-9
score: 45.7
IPR005172CRC domainPFAMPF03638TCRcoord: 835..869
e-value: 7.3E-12
score: 45.4
coord: 926..958
e-value: 2.5E-10
score: 40.5
IPR005172CRC domainPROSITEPS51634CRCcoord: 832..960
score: 26.011684
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 509..534
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1144..1171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 431..445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..493
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..470
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1155..1171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 748..766
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 691..816
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..127
NoneNo IPR availablePANTHERPTHR12446:SF34PROTEIN LIN-54 HOMOLOGcoord: 723..990
IPR028307Lin-54 familyPANTHERPTHR12446TESMIN/TSO1-RELATEDcoord: 723..990

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_43contigContig_43:271911..292544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349447mRNA_13738Tribonema minus UTEX_B_3156 mRNAContig_43 271911..292544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349447|estExt_Genemark1.C_Ctg_430025 ID=Trimin1|349447|estExt_Genemark1.C_Ctg_430025|Name=jgi.p|Trimin1|349447|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1263bp
MGFASPPGVHAPSARSAAQGGGAQPGPLKKQNSLVAELALTQHRQQQRWQ
LRSSNGGAMHSAMPAPAQPRVRNEDVMAAPGGGAMGGPNREAQTPSRHSY
DSPTGSPRRGPARGVAEDGEIPGPALGVAEDREIPWGLMDMKSPKNVTAE
LTLLQPLAAQGLMDMKSPKNGLMDMKSPKNGLMDMKSPKNGLMNMKSPKN
VLEFADHQRETPPSTPIKSNGRGGGAFNPFNTVVGDAMSYSHGGGLFHPF
NPAIGDAMSYSHGTPPGPHPGMLSPGMCSPSLFFAMTPNANGSAMSPMNT
SLLLGGDDSVRTPVAARLAQRGGGGGGSDGVLEGGDPGYRSGSSGGDGGG
GDGVLEGGEPAYQSSSGGDGGSGGGGDGVLEGGEPGYRSSPICNEAALGP
EGSIGTTRRTRSSMRKGAAAAAAPATPKALKSNGHSASTPDANRINTLVH
ALVAETPGTSDTSSGSRGGPPQTPEGERYHLLSDRGSGGGGGMSPGFISP
MRLDHLGSPVPAVPAGSPVKAPQQQQELSAGEEQAWDETAAAATKAWDDA
HETAAAAAEIAAIRAEAGVRGAGMGMGMVGNPGWRVTDKEAEVVLGGPFV
PQMLAIINSRIWGADEPDPTELSECLTAGTVREATGLSSAHRKTTIYFGR
GVTGGTIALSGAVTHGQRCRSEALLSSFTVEGGVARTASDAASHPYATST
AEHFDERPALPARSSARHSDGGSGSKRGRGRGLLPGLLEAPGSDAKKSRA
TPPSSAPRSILKQELASPSQLARPPRMSLCSPPPPTPKKRPRVSISSAEP
SVQQFGKEPPIAVEQLQPPFGKEPPIAVEQLQPPSCNCKKSRCLKLYCEC
FQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTAL
PAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRC
KCDGCKNRSSVEQATAAAAGAAAAEQQRSAAAAAEAAAAAANAAAALPCA
AVSDGGGRGGGGGSECGGGTAFRGGGSSGGGGGDCGRGTALRPRLYIATT
TATTAAAAAANAAAAVAHIQQPPFSNLNYHPAAPHALLTAEDEAAAAEAA
AGSLGAYFPGTPLVGIGTSNDARGYADESPLPTFIGDLGGPIEGTSGPIE
GTSGGVLKENSSSVAERNRSRSASPTELKLTLLPLRQRRWDAACTPVQRD
RYCRPFGRQPRLLMYRGSMVNVLSFLNNADLAAAARVAKSWSNFAANAAL
WEDAPTDAAPPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033467Tesmin/TSO1-like_CXC
IPR005172CRC
IPR028307Lin-54_fam