Trimin1|349352|estExt_Genemark1.C_Ctg_420008 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349352
Unique NameTrimin1|349352|estExt_Genemark1.C_Ctg_420008
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1462
Homology
BLAST of jgi.p|Trimin1|349352 vs. uniprot
Match: A0A835YSR2_9STRA (RIC1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR2_9STRA)

HSP 1 Score: 2546 bits (6598), Expect = 0.000e+0
Identity = 1461/1461 (100.00%), Postives = 1461/1461 (100.00%), Query Frame = 0
Query:    1 MQFAVPDWLETHYPGVHQPLAGGGKDEEDEWLNPVEVALQVLTRYRTVQPVLSPLPAEAFFADEPAERHMHTHSAHVFRGAETLPSGVRSVSFCDTLQLLALVTDDGQFSLCTLSGETCCVRTIATVATTEGSSGGASPTSTSNNASARAEPPEVAAKLGLFSGKGGLLAVALGDGSVLLSRVERFTSGARAGDGLRVMSGLENRRNSFRLDPAERLDPADAAELAAATLDIAGGAEGLGGSGSFQSDVPGGGHAPDTPRSAQQRGIATLAGVEIHQLHSLSLGPYLAAGGVTCLCFSDDGHALAVGHEGALALWSTDDGTRLSCSATGGAGVGGSGGGGVRGLAWGYHGYRLLAVAGSGMGSPLRGPPQQQERILVYDLLRHAGSAVSGAPLCLQDSTRVVTLEARPWDSHSLYWRVLPCHGGYLASNAPLQHERELEVCGLCWWGEEAVIALARQGSMYWLRLYPRTHLDDASLLLAPLRLPVGMKPAFFSAMPVTRRAGSEILVLVASQRSYLVYRFSQTPAGVTSEVAHQGTLPHVQPTHCTSAATTGGSGXXXXXXXXXXAKRRQWRAGSAASALSLADEGRIGAPRRLFLVPAVVPPLLGILDFDGNLAVVELEGGCCRQRRSFSRAKALARQQRRLKREAARLIEEAYSEEYQVWCPALQLELPDGAFSEDSLDGGTDEALALDPHAYADPESMALGLLARKGAMVVCRPRDNAASAGSTAVNGPPPAEPLQLPPCYEMRTRLRPLLHLLGSADPPPXXXXXXXXAGAVRGFDVAASILAELKRDAALAEAVPDTLELLLRACLEGRHLANEAQKGPAGDATRAQAAAVLSGALRLCALARGCFLEVVARVSRKMEPDWYALLFPLLLGGEGGYEGAHPTHLLHACLEQGRLATAAWFLPLVSDHAVSAARSRSAPPHELEALLPPPMLPLTGAEWSHGLSHALCCCLLLRCLEAPHTHALLPEVWLFACKRERSAASPPQSAVRISAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVXXXXXXXXXXXXPSLLWRIGRTLLWGGGSGPNTPQSQPSTPVDAAPLSPLSAAGTPSHTPSRQRMHRGDAASPAAYSYPSPRVSAAASVLSTAQSPRSDXXXXXXXXXXXXXXXAWRRLSLADGDTSATSTYARVPGRSAAAVLAGFVWRRLTAMRAAEAHAAFCALALSSAGRDAGVERERVMATLRVVARSGAAGGAGPPQETMAHILQSFLHHFKTQLPHLLHTIAVGRAALPXXXXXXXXXXXSVTPAVAAAPLSLPPESEAAVAAVQWLEVVRDLAVHVRHMETALVAATLLRDAPAVSALLGAAPPSLKAAYSEFLQQLLPSVGAAAASPTHYAPEQDAPAPEGTQEDLAPESAALLPKAGSIAGTSTGASASAAANGEVGVVVALQQWGGQCLSAAAAARAGDR 1461
            MQFAVPDWLETHYPGVHQPLAGGGKDEEDEWLNPVEVALQVLTRYRTVQPVLSPLPAEAFFADEPAERHMHTHSAHVFRGAETLPSGVRSVSFCDTLQLLALVTDDGQFSLCTLSGETCCVRTIATVATTEGSSGGASPTSTSNNASARAEPPEVAAKLGLFSGKGGLLAVALGDGSVLLSRVERFTSGARAGDGLRVMSGLENRRNSFRLDPAERLDPADAAELAAATLDIAGGAEGLGGSGSFQSDVPGGGHAPDTPRSAQQRGIATLAGVEIHQLHSLSLGPYLAAGGVTCLCFSDDGHALAVGHEGALALWSTDDGTRLSCSATGGAGVGGSGGGGVRGLAWGYHGYRLLAVAGSGMGSPLRGPPQQQERILVYDLLRHAGSAVSGAPLCLQDSTRVVTLEARPWDSHSLYWRVLPCHGGYLASNAPLQHERELEVCGLCWWGEEAVIALARQGSMYWLRLYPRTHLDDASLLLAPLRLPVGMKPAFFSAMPVTRRAGSEILVLVASQRSYLVYRFSQTPAGVTSEVAHQGTLPHVQPTHCTSAATTGGSGXXXXXXXXXXAKRRQWRAGSAASALSLADEGRIGAPRRLFLVPAVVPPLLGILDFDGNLAVVELEGGCCRQRRSFSRAKALARQQRRLKREAARLIEEAYSEEYQVWCPALQLELPDGAFSEDSLDGGTDEALALDPHAYADPESMALGLLARKGAMVVCRPRDNAASAGSTAVNGPPPAEPLQLPPCYEMRTRLRPLLHLLGSADPPPXXXXXXXXAGAVRGFDVAASILAELKRDAALAEAVPDTLELLLRACLEGRHLANEAQKGPAGDATRAQAAAVLSGALRLCALARGCFLEVVARVSRKMEPDWYALLFPLLLGGEGGYEGAHPTHLLHACLEQGRLATAAWFLPLVSDHAVSAARSRSAPPHELEALLPPPMLPLTGAEWSHGLSHALCCCLLLRCLEAPHTHALLPEVWLFACKRERSAASPPQSAVRISAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVXXXXXXXXXXXXPSLLWRIGRTLLWGGGSGPNTPQSQPSTPVDAAPLSPLSAAGTPSHTPSRQRMHRGDAASPAAYSYPSPRVSAAASVLSTAQSPRSDXXXXXXXXXXXXXXXAWRRLSLADGDTSATSTYARVPGRSAAAVLAGFVWRRLTAMRAAEAHAAFCALALSSAGRDAGVERERVMATLRVVARSGAAGGAGPPQETMAHILQSFLHHFKTQLPHLLHTIAVGRAALPXXXXXXXXXXXSVTPAVAAAPLSLPPESEAAVAAVQWLEVVRDLAVHVRHMETALVAATLLRDAPAVSALLGAAPPSLKAAYSEFLQQLLPSVGAAAASPTHYAPEQDAPAPEGTQEDLAPESAALLPKAGSIAGTSTGASASAAANGEVGVVVALQQWGGQCLSAAAAARAGDR
Sbjct:    1 MQFAVPDWLETHYPGVHQPLAGGGKDEEDEWLNPVEVALQVLTRYRTVQPVLSPLPAEAFFADEPAERHMHTHSAHVFRGAETLPSGVRSVSFCDTLQLLALVTDDGQFSLCTLSGETCCVRTIATVATTEGSSGGASPTSTSNNASARAEPPEVAAKLGLFSGKGGLLAVALGDGSVLLSRVERFTSGARAGDGLRVMSGLENRRNSFRLDPAERLDPADAAELAAATLDIAGGAEGLGGSGSFQSDVPGGGHAPDTPRSAQQRGIATLAGVEIHQLHSLSLGPYLAAGGVTCLCFSDDGHALAVGHEGALALWSTDDGTRLSCSATGGAGVGGSGGGGVRGLAWGYHGYRLLAVAGSGMGSPLRGPPQQQERILVYDLLRHAGSAVSGAPLCLQDSTRVVTLEARPWDSHSLYWRVLPCHGGYLASNAPLQHERELEVCGLCWWGEEAVIALARQGSMYWLRLYPRTHLDDASLLLAPLRLPVGMKPAFFSAMPVTRRAGSEILVLVASQRSYLVYRFSQTPAGVTSEVAHQGTLPHVQPTHCTSAATTGGSGXXXXXXXXXXAKRRQWRAGSAASALSLADEGRIGAPRRLFLVPAVVPPLLGILDFDGNLAVVELEGGCCRQRRSFSRAKALARQQRRLKREAARLIEEAYSEEYQVWCPALQLELPDGAFSEDSLDGGTDEALALDPHAYADPESMALGLLARKGAMVVCRPRDNAASAGSTAVNGPPPAEPLQLPPCYEMRTRLRPLLHLLGSADPPPXXXXXXXXAGAVRGFDVAASILAELKRDAALAEAVPDTLELLLRACLEGRHLANEAQKGPAGDATRAQAAAVLSGALRLCALARGCFLEVVARVSRKMEPDWYALLFPLLLGGEGGYEGAHPTHLLHACLEQGRLATAAWFLPLVSDHAVSAARSRSAPPHELEALLPPPMLPLTGAEWSHGLSHALCCCLLLRCLEAPHTHALLPEVWLFACKRERSAASPPQSAVRISAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVXXXXXXXXXXXXPSLLWRIGRTLLWGGGSGPNTPQSQPSTPVDAAPLSPLSAAGTPSHTPSRQRMHRGDAASPAAYSYPSPRVSAAASVLSTAQSPRSDXXXXXXXXXXXXXXXAWRRLSLADGDTSATSTYARVPGRSAAAVLAGFVWRRLTAMRAAEAHAAFCALALSSAGRDAGVERERVMATLRVVARSGAAGGAGPPQETMAHILQSFLHHFKTQLPHLLHTIAVGRAALPXXXXXXXXXXXSVTPAVAAAPLSLPPESEAAVAAVQWLEVVRDLAVHVRHMETALVAATLLRDAPAVSALLGAAPPSLKAAYSEFLQQLLPSVGAAAASPTHYAPEQDAPAPEGTQEDLAPESAALLPKAGSIAGTSTGASASAAANGEVGVVVALQQWGGQCLSAAAAARAGDR 1461          
BLAST of jgi.p|Trimin1|349352 vs. uniprot
Match: D8LB77_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB77_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 5.220e-63
Identity = 260/892 (29.15%), Postives = 362/892 (40.58%), Query Frame = 0
Query:    2 QFAVPDWLETHYPGVHQPLAGGGKDEEDEWLNPVEVALQVLTRYRTV-------------QPVLSPLPAEAFFA----------------DEPAER----HMHTHSAHVFRGAETLPS-------GVRSVSFCDTLQLLALVTDDGQFSLCTLSGETCCVRTIATVATTEGSSGGASPTSTSNNASARAEPPEVAAK--------------LGL------------------------------------------------------FSGKGGLLAVALGDGSVLLSRVERFTSGARAGDGLRVMSGLENRRNSFRLDPAERLDPADAAELAAATLDIAGGAEGLGGSGSFQSDVPGGGHAPDTPRS---AQQRGIATLAGVEIHQLHSLSLGPYLA--------------AGGVTCLCFSDDGHALAVGHEGALALWSTDDGTRLSCSATGGA----GVGGSG-------------------------------------------------GGGVRGLAWGYHGYRLLAVAGSGMGSPLR-GPPQQQERILVYDLLRHAGSAVSGAPLCLQDSTRVVTLEARPWDSHSLYWRVLPCHGGYLASNAPLQH------------------------------------ERELEVCGLCWWGEEAVIALARQGSMYWLRLYPRTHLDDASLLLAPLRLPVGMKPAFFSAMPVT-RRAGSEIL-VLVASQRSYLVYRFSQT-----PAGVTSEVAHQGTLPHV------------------------QPT-HCTSAATTG-------------------GSGXXXXXXXXXXAKRRQWRAGSAASALSLA-DEGRIGAPRRLFLVPAVVPPLLGILDFDGNLAVVELEGGCCRQ 626
            +FA+PDW+E  +    +  A    +E D W +PVE  L +++   ++             Q VL    + + +                   P+ R           H+ +G ET P        G  S+SF DTLQLLAL   DG F L  LS  TC +R IA    +  ++  A P++ +      A PP   A               LG                                                       FS KGGL+AVAL DG+VLL+RVER+TSG RA   L++ + + +R +S RL+            LA  TL      +GLG     + D  GG  +P   R+   +++  +++L GVE+H L+ LSL P+L               AG V  LCFS DG ALAVGHEGAL +WST+DGTRL C+ T       G  G+                                                   GG R L+W   GYRL++V GS +G+    G     + I+ +D LR A S +S + L LQ S R+  ++++PW +  L WRVLP H GYL+SNAPL+H                                    ERE++V G+CWWGE A++  +R    + L L+ R HL   +L++ P+RLPVGM+P F  A+     R G+++L +LVA   SYL+YR S T        +T  V H+G LPHV                         PT H   AA T                    G            A    W  G    A     D   IG P+R+ L+P V P  + +LDFDGN+  +E+  G  R+
Sbjct:  153 RFALPDWIEPQHA---RTAAENDGEERDAWADPVEADLAMVSTVESIGSEASAMCLGRFGQHVLLGTASGSIYGVSWEGQILCCYDIVPGPSPSPRVNSXXXXXSGGHLEQG-ETEPGTRRFGGQGASSMSFNDTLQLLALTATDGSFFLGKLSKTTCWLRNIAVADRSRATA--APPSAAAGRKPNSAAPPSFLANADGDNQEIGWGWRLLGTGRNAVAAAVDALSSPRSNTDGVFFSGGDGXXXXXXXXXXXESGDTAGTGAVGVEFSAKGGLMAVALADGTVLLARVERYTSGVRARHKLQISNSMLHRSDSHRLEDY----------LADETLRAE---QGLGDV--SEGDGKGGVTSPPDARTRTFSREGTMSSLWGVEVHHLNCLSLDPWLGPGDGGGGGESLLGPAGRVLSLCFSADGGALAVGHEGALTVWSTEDGTRLVCTTTESRDDLDGYEGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPPLSPSRAARGTLDLIAGGARALSWEREGYRLMSV-GSAVGAAAGVGGDAGAQGIVAFDFLRRARSNLSSSLLSLQGSDRIALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTYVAVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVASRHKHGFILLLFSRKHLSSDALMIPPIRLPVGMRPLFMQAVQEGGSRPGTDVLFLLVAGSTSYLLYRLSCTGGVFEAGNLTYSVLHEGPLPHVLGNMEPDQHYTDPSPSSDPNPDEETPTEHRPIAADTAPGAAXXXXXXXXXXXXXXXGGSRDVKGGFAVGAGMGGWGQGEKRKARREGGDLPEIGPPKRVMLLPEVHPRSIALLDFDGNMVTMEMSSGMVRR 1022          
BLAST of jgi.p|Trimin1|349352 vs. uniprot
Match: A0A6H5KDH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDH8_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 5.320e-30
Identity = 232/732 (31.69%), Postives = 298/732 (40.71%), Query Frame = 0
Query:  779 FDVAASILAELKRDAALAEAVPDTLELLLRACLEGRHLANEAQKGPAG------------------------DATRAQ---AAAVLSGALRLCALARGCFLEVVARVSRKMEPDWYALLFPLLL--------------------------------------------GGEGGY------------EGAHPTHLLHACLEQGRLATAAWFLPLVSDHAVSAARSRSAPPH------ELEALLPPPMLPLTGAEWSHGLSHALCCCLLLRCLEAPHTHALLPEVWLFACKRERSAASPPQSAVRISAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVXXXXXXXXXXXXPSLLWRIGRTLLWGGGSGPNTPQSQPSTPVDAAPLSPLSAAGTPSHTPSRQRMHRGDAASPAAYSYPSPRVSAAASVLSTAQSPRSDXXXXXXXXXXXXXXXAWRRLSLADGDTSATSTYARVPGRSAAAVLAGFVWRRLTAMRAAEAHAAFCALALSSAGRDAGVERERVMATLRVVARSGAAGGAGPPQETMAHILQSFLHHFKTQLPHLLHTIA-VGRAALPXXXXXXXXXXXSVT-----------------------------------------PAVAAAPLSLPPESEAAVAAVQWLEVVRDLAVHVRHMETALVAATLLRDAPAVSALLGAAPPSLKAAYSEFLQQLLPSV 1379
            F++A ++L   + D+ L EA+PDTLELLLRAC+EG  +A    K  +                          AT ++   A AV+S ++ L  LA  CF EVVARV+RK EP+ Y LLFPL L                                             G GG                HPTHL H C+  G+L TAAW+LPL+ D     A  R   P+      E   L+P  M  +TG  W +GLSHAL C LLL  L + + HALLPEVWLFA KRE+SA   P    R    XXXXXXXXXXX                                         +               L W +G T  WG  +G    +  P +PV  A L      GT     S  R+         A   P     A A+           XXXXXXXXXXXXXXX             +T  Y     R AA+V++ F+W+ L  +R      AF +LA S+A R+AG++  +V+A L    RS      G P ET A +L S    FK  +  L    A  G+    XXXXXXXXXXX                                            P  AA   +L   S  + +    LE++ DL+  V H+E ALV+A+LLRD    +A+LG+A   L+  Y  F+  LL  V
Sbjct:  157 FEIAVAVLKRCREDSVLVEALPDTLELLLRACMEGLSIAGARAKRSSSALSHNXXXXXXXXXXXXXXXXXXXXATVSELELARAVMSDSVYLAQLAPECFHEVVARVARKAEPERYPLLFPLHLVCGAPDAEEEETEKVSSXXXXXXXXXXXXXXXRARSVEAVNGERAGAGGVGQVGRCVGPRWGRWVHPTHLFHDCVSSGKLTTAAWYLPLIRDDVAFDAAQRHVGPNGPLSEEERSRLMPLEMWAVTGDGWPYGLSHALSCVLLLASLSS-NQHALLPEVWLFARKREQSA---PHQRHRHXXXXXXXXXXXXXXGGAGVSDARWWTMGQGAAIEALLARDKTRRQVAGGGAEAMLRRTSSDNRFRRGNVGGLGWAVGGTG-WGSSAGGEA-KGIPRSPVSRAALE--GGRGTHFGRTSALRLR--------ALRRPGRLGDADANSADDTGDESXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESTRLYHLPLTRDAASVVSRFMWKELNELRVKVVLRAFQSLACSTAAREAGLDAGQVLAALSPARRSMVGSLHGSPVETFAGLLVSLAEMFKVSVGTLAQLAAPAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPTSAARQRAL---SALSASVRPQLELLGDLSRAVGHVEAALVSASLLRDMAGATAILGSASQPLRVGYGHFIANLLEQV 869          
BLAST of jgi.p|Trimin1|349352 vs. uniprot
Match: A0A4D9CZK3_9STRA (RIC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZK3_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 8.760e-8
Identity = 49/155 (31.61%), Postives = 71/155 (45.81%), Query Frame = 0
Query:  375 ILVYDLLRHAG-SAVSGAPLCLQDSTRVVTLEARPWDSHSLYWRVLPCHGGY-------LASNAP----------------------------LQHERELEVCGLCWWGEEAVIALARQGSMYW--LRLYPRTHLDDASLLLAPLRLPVGMKPAF 491
            I+ Y++LR A  +A +   LCLQ    +  LE RPW+   L W  +     Y       L + +P                            +  ERELEV G+ WWGE+AV+ +A+  S     + +Y R HLD++SLL  P+ LP G +P F
Sbjct:  498 IVRYEMLRWARHAAFAHTALCLQGVNTLAFLEQRPWNPRLLSWAHVTVPPAYSVNVPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRAGCDILVYSRHHLDNSSLLCDPVPLPPGTRPLF 652          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349352 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YSR2_9STRA0.000e+0100.00RIC1 domain-containing protein n=1 Tax=Tribonema m... [more]
D8LB77_ECTSI5.220e-6329.15SHR-BD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KDH8_9PHAE5.320e-3031.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9CZK3_9STRA8.760e-831.61RIC1 domain-containing protein n=2 Tax=Monodopsida... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 633..653
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1078..1094
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1039..1053
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 541..570
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1385..1409
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1027..1172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1134..1149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 541..558
IPR009771Ribosome control protein 1PFAMPF07064RIC1coord: 800..910
e-value: 1.9E-5
score: 24.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 65..416
e-value: 1.6E-8
score: 35.9
IPR040096RAB6A-GEF complex partner protein 1PANTHERPTHR22746RAB6A-GEF COMPLEX PARTNER PROTEIN 1coord: 81..434
coord: 800..921
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 86..460

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_42contigContig_42:64851..79455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349352mRNA_5601Tribonema minus UTEX_B_3156 mRNAContig_42 64757..79455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349352|estExt_Genemark1.C_Ctg_420008 ID=Trimin1|349352|estExt_Genemark1.C_Ctg_420008|Name=jgi.p|Trimin1|349352|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1462bp
MQFAVPDWLETHYPGVHQPLAGGGKDEEDEWLNPVEVALQVLTRYRTVQP
VLSPLPAEAFFADEPAERHMHTHSAHVFRGAETLPSGVRSVSFCDTLQLL
ALVTDDGQFSLCTLSGETCCVRTIATVATTEGSSGGASPTSTSNNASARA
EPPEVAAKLGLFSGKGGLLAVALGDGSVLLSRVERFTSGARAGDGLRVMS
GLENRRNSFRLDPAERLDPADAAELAAATLDIAGGAEGLGGSGSFQSDVP
GGGHAPDTPRSAQQRGIATLAGVEIHQLHSLSLGPYLAAGGVTCLCFSDD
GHALAVGHEGALALWSTDDGTRLSCSATGGAGVGGSGGGGVRGLAWGYHG
YRLLAVAGSGMGSPLRGPPQQQERILVYDLLRHAGSAVSGAPLCLQDSTR
VVTLEARPWDSHSLYWRVLPCHGGYLASNAPLQHERELEVCGLCWWGEEA
VIALARQGSMYWLRLYPRTHLDDASLLLAPLRLPVGMKPAFFSAMPVTRR
AGSEILVLVASQRSYLVYRFSQTPAGVTSEVAHQGTLPHVQPTHCTSAAT
TGGSGGAGSGSGPSPAKRRQWRAGSAASALSLADEGRIGAPRRLFLVPAV
VPPLLGILDFDGNLAVVELEGGCCRQRRSFSRAKALARQQRRLKREAARL
IEEAYSEEYQVWCPALQLELPDGAFSEDSLDGGTDEALALDPHAYADPES
MALGLLARKGAMVVCRPRDNAASAGSTAVNGPPPAEPLQLPPCYEMRTRL
RPLLHLLGSADPPPHNGAAAAAAGAVRGFDVAASILAELKRDAALAEAVP
DTLELLLRACLEGRHLANEAQKGPAGDATRAQAAAVLSGALRLCALARGC
FLEVVARVSRKMEPDWYALLFPLLLGGEGGYEGAHPTHLLHACLEQGRLA
TAAWFLPLVSDHAVSAARSRSAPPHELEALLPPPMLPLTGAEWSHGLSHA
LCCCLLLRCLEAPHTHALLPEVWLFACKRERSAASPPQSAVRISAAVTAA
ALNAAIAGAGGGAAAAAAAAQSSAAERGGAGGGRAATPQRQQRKATQLQV
SQRPPTPPADPPPSLLWRIGRTLLWGGGSGPNTPQSQPSTPVDAAPLSPL
SAAGTPSHTPSRQRMHRGDAASPAAYSYPSPRVSAAASVLSTAQSPRSDA
AAAGSAPGSPGSPGAWRRLSLADGDTSATSTYARVPGRSAAAVLAGFVWR
RLTAMRAAEAHAAFCALALSSAGRDAGVERERVMATLRVVARSGAAGGAG
PPQETMAHILQSFLHHFKTQLPHLLHTIAVGRAALPPPPPPLLPAAASVT
PAVAAAPLSLPPESEAAVAAVQWLEVVRDLAVHVRHMETALVAATLLRDA
PAVSALLGAAPPSLKAAYSEFLQQLLPSVGAAAASPTHYAPEQDAPAPEG
TQEDLAPESAALLPKAGSIAGTSTGASASAAANGEVGVVVALQQWGGQCL
SAAAAARAGDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009771Ribosome_control_1
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR040096Ric1
IPR036322WD40_repeat_dom_sf