Trimin1|349088|estExt_Genemark1.C_Ctg_350101 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|349088
Unique Name	Trimin1\|349088\|estExt_Genemark1.C_Ctg_350101
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	264

Homology

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BLAST of jgi.p|Trimin1|349088 vs. uniprot
Match: A0A836CDR8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDR8_9STRA)

HSP 1 Score: 380 bits (977), Expect = 3.060e-131
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0

Query:    1 MQRSGGNALVGLACFAGGAAVASALHYRQQQKHLAEVEQARAATVATLRSEIAELTQAKHQLSETLATVQAQHALLRNDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDIAASYIEDLESTLQKLQAQKPPQSPAPAAAASASPPRTPSKADRAASMDSHGDDDSDGNTTXXXXXXXXXXXXXXXXPNHDAFATAGRGAPAHGGAPRLSSGSGSMAKCLQEELMDIEHDGRGSKAASKDAAAAPARAWGVLNYLTSGGR 263
            MQRSGGNALVGLACFAGGAAVASALHYRQQQKHLAEVEQARAATVATLRSEIAELTQAKHQLSETLATVQAQHALLRNDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDIAASYIEDLESTLQKLQAQKPPQSPAPAAAASASPPRTPSKADRAASMDSHGDDDSDGNTTXXXXXXXXXXXXXXXXPNHDAFATAGRGAPAHGGAPRLSSGSGSMAKCLQEELMDIEHDGRGSKAASKDAAAAPARAWGVLNYLTSGGR
Sbjct:    1 MQRSGGNALVGLACFAGGAAVASALHYRQQQKHLAEVEQARAATVATLRSEIAELTQAKHQLSETLATVQAQHALLRNDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDIAASYIEDLESTLQKLQAQKPPQSPAPAAAASASPPRTPSKADRAASMDSHGDDDSDGNTTXXXXXXXXXXXXXXXXPNHDAFATAGRGAPAHGGAPRLSSGSGSMAKCLQEELMDIEHDGRGSKAASKDAAAAPARAWGVLNYLTSGGR 263

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349088 vs. uniprot

BLAST of jgi.p|Trimin1|349088 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CDR8_9STRA	3.060e-131	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 45..72
None	No IPR available	COILS	Coil	Coil	coord: 84..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..194

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_35	contig	Contig_35:896033..896824 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349088	mRNA_7784	Tribonema minus UTEX_B_3156	mRNA	Contig_35 896030..896824 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|349088|estExt_Genemark1.C_Ctg_350101 ID=Trimin1|349088|estExt_Genemark1.C_Ctg_350101|Name=jgi.p|Trimin1|349088|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=264bp
MQRSGGNALVGLACFAGGAAVASALHYRQQQKHLAEVEQARAATVATLRS
EIAELTQAKHQLSETLATVQAQHALLRNDFAEEKQALAAKIAECIMEVEE
LKATEQKLREDLDIAASYIEDLESTLQKLQAQKPPQSPAPAAAASASPPR
TPSKADRAASMDSHGDDDSDGNTTAPGSPATACAPTTPSSPNHDAFATAG
RGAPAHGGAPRLSSGSGSMAKCLQEELMDIEHDGRGSKAASKDAAAAPAR
AWGVLNYLTSGGR*