Trimin1|349071|estExt_Genemark1.C_Ctg_350069 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349071
Unique NameTrimin1|349071|estExt_Genemark1.C_Ctg_350069
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length310
Homology
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BLAST of jgi.p|Trimin1|349071 vs. uniprot
Match: A0A836CDQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDQ9_9STRA)

HSP 1 Score: 618 bits (1593), Expect = 1.460e-223
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0 
Query:    1 MYCTSCLPQRGGDWVGFMDIDVLGDTDSAKRNRIREARYPTVGNVLAASDLWPDGAAQTEVLRQAAADSEFATAGIAQPFGDGVITMLAGKFQCPSDPAEVHTTLTAMRHSTVTAANVERAQHGGNSSSSSRICIDGDFPVTMEGVADRNKTLQCATNTTVMVVTQLLAPVGQALHSIATLSNRMPTTVKGSYTECPRDQHRALFREAHVKYLRALCDTGVDIFVGISPRNKADFAAAHPGGCAYILAEYGGSTLEVFVPEEGAAHEAQMFITEHVAFEQQLSWQRGVGTVQRVAPVDAKRLVVFAAMQ 309
            MYCTSCLPQRGGDWVGFMDIDVLGDTDSAKRNRIREARYPTVGNVLAASDLWPDGAAQTEVLRQAAADSEFATAGIAQPFGDGVITMLAGKFQCPSDPAEVHTTLTAMRHSTVTAANVERAQHGGNSSSSSRICIDGDFPVTMEGVADRNKTLQCATNTTVMVVTQLLAPVGQALHSIATLSNRMPTTVKGSYTECPRDQHRALFREAHVKYLRALCDTGVDIFVGISPRNKADFAAAHPGGCAYILAEYGGSTLEVFVPEEGAAHEAQMFITEHVAFEQQLSWQRGVGTVQRVAPVDAKRLVVFAAMQ
Sbjct:    1 MYCTSCLPQRGGDWVGFMDIDVLGDTDSAKRNRIREARYPTVGNVLAASDLWPDGAAQTEVLRQAAADSEFATAGIAQPFGDGVITMLAGKFQCPSDPAEVHTTLTAMRHSTVTAANVERAQHGGNSSSSSRICIDGDFPVTMEGVADRNKTLQCATNTTVMVVTQLLAPVGQALHSIATLSNRMPTTVKGSYTECPRDQHRALFREAHVKYLRALCDTGVDIFVGISPRNKADFAAAHPGGCAYILAEYGGSTLEVFVPEEGAAHEAQMFITEHVAFEQQLSWQRGVGTVQRVAPVDAKRLVVFAAMQ 309
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349071 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CDQ9_9STRA1.460e-223100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_35contigContig_35:620950..623425 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349071mRNA_7752Tribonema minus UTEX_B_3156 mRNAContig_35 620950..623483 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349071|estExt_Genemark1.C_Ctg_350069 ID=Trimin1|349071|estExt_Genemark1.C_Ctg_350069|Name=jgi.p|Trimin1|349071|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=310bp
MYCTSCLPQRGGDWVGFMDIDVLGDTDSAKRNRIREARYPTVGNVLAASD
LWPDGAAQTEVLRQAAADSEFATAGIAQPFGDGVITMLAGKFQCPSDPAE
VHTTLTAMRHSTVTAANVERAQHGGNSSSSSRICIDGDFPVTMEGVADRN
KTLQCATNTTVMVVTQLLAPVGQALHSIATLSNRMPTTVKGSYTECPRDQ
HRALFREAHVKYLRALCDTGVDIFVGISPRNKADFAAAHPGGCAYILAEY
GGSTLEVFVPEEGAAHEAQMFITEHVAFEQQLSWQRGVGTVQRVAPVDAK
RLVVFAAMQ*
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