Trimin1|349024|estExt_Genemark1.C_Ctg_340059 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349024
Unique NameTrimin1|349024|estExt_Genemark1.C_Ctg_340059
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length153
Homology
BLAST of jgi.p|Trimin1|349024 vs. uniprot
Match: A0A835YZ48_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ48_9STRA)

HSP 1 Score: 280 bits (716), Expect = 4.390e-95
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query:    1 MKAAARTVLASLALLALNCAHAFIVAPAAKEEPAVDVDWSAEFSAVKDAYAAAKEGLEARVAAGDWQGVMTQAQGLDQSFRKRLMGGLRKRFPKESKALKEEALLLCNAVTFDLIAINKAGRSKDEPAAREALAVLDADVGKFLALEPQLLQ 152
            MKAAARTVLASLALLALNCAHAFIVAPAAKEEPAVDVDWSAEFSAVKDAYAAAKEGLEARVAAGDWQGVMTQAQGLDQSFRKRLMGGLRKRFPKESKALKEEALLLCNAVTFDLIAINKAGRSKDEPAAREALAVLDADVGKFLALEPQLLQ
Sbjct:    1 MKAAARTVLASLALLALNCAHAFIVAPAAKEEPAVDVDWSAEFSAVKDAYAAAKEGLEARVAAGDWQGVMTQAQGLDQSFRKRLMGGLRKRFPKESKALKEEALLLCNAVTFDLIAINKAGRSKDEPAAREALAVLDADVGKFLALEPQLLQ 152          
BLAST of jgi.p|Trimin1|349024 vs. uniprot
Match: D8LSP3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSP3_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 2.710e-22
Identity = 60/137 (43.80%), Postives = 82/137 (59.85%), Query Frame = 0
Query:   14 LLALNCAHAFIVAPAAKEEPAVDVDWSAEFSAVKDAYAAAKEGLEARVAAGDWQGVMTQAQGLDQSFRKRLMGGLRKRFPKESKALKEEALLLCNAVTFDLIAINKAGRSKDEPAAREALAVLDADVGKFLALEPQL 150
            L A+       VA  A + P   VDW+AEF +VK A     + L+     GDW+ +M QA+G DQS RK LMG +RK+ PKE   +K +A+   N +TFDLIAINKA R +D P   E L +L+AD+  FL L+ ++
Sbjct:   96 LAAITLGPNMAVAKQAADSP---VDWTAEFGSVKKATDLVLKDLKTLATDGDWEQLMEQAKGYDQSIRKGLMGDVRKKMPKE---IKGDAMTYRNNITFDLIAINKAARVEDRPRTFEVLDILEADINGFLNLQKRI 226          
BLAST of jgi.p|Trimin1|349024 vs. uniprot
Match: A0A7S2E7S6_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E7S6_TRICV)

HSP 1 Score: 71.2 bits (173), Expect = 1.100e-12
Identity = 48/94 (51.06%), Postives = 58/94 (61.70%), Query Frame = 0
Query:   57 LEARVAAGDWQGVMTQAQGLDQSFRKRLMGGLRKRFPKESKALKEEALLLCNAVTFDLIAINKA---GRSKDEPAAREALAVLDADVGKFLALE 147
            L +RVA+ D+QG+M   +  D  FRK  MG  RK      K +KEEA+LLCNAVTFDLI +NK+   GR   E A R  L  L AD+ KFL LE
Sbjct:   57 LASRVASEDYQGIMDYTKEYDLEFRKAKMGRARKLLT--DKKVKEEAVLLCNAVTFDLIGMNKSSRPGRENREEAERY-LGELRADIAKFLELE 147          
BLAST of jgi.p|Trimin1|349024 vs. uniprot
Match: A0A7S1BQ70_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQ70_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.090e-12
Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 0
Query:   64 GDWQGVMTQAQGLDQSFRKRLMGGLRKRFPKESKA---LKEEALLLCNAVTFDLIAINKAGRSKDEPAAREALAVLDADVGKFLALEPQL 150
            G+W  V+   +  D SFRK +MG  RK  PK ++    L+E+ LLL N VTFDLI +N+A R+KD  AA++A  +L  D+ KFL L  Q+
Sbjct:  126 GNWPFVLEFTKDYDLSFRKLIMGKARKMIPKTTETNAKLREQGLLLTNGVTFDLIGVNRAARTKDADAAKKAYNLLIEDIQKFLDLGSQV 215          
BLAST of jgi.p|Trimin1|349024 vs. uniprot
Match: A0A7S0K9R3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K9R3_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 8.240e-11
Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 0
Query:   65 DWQGVMTQAQGLDQSFRKRLMGGLRKRFPKESKALKEEALLLCNAVTFDLIAINKAGRSKDEPAAREALAVLDADVGKFLALEPQLL 151
            DW  +    +G D   RK+ MG  RK    +SK +K+ AL L NAVTFDLIA+NKA R +DE + REAL +L  DV  FL  + +++
Sbjct:  107 DWTEIKEFTKGYDLELRKKKMGFARKMMT-DSK-MKDGALALRNAVTFDLIAVNKAARVQDESSCREALEILKTDVSSFLTYQDKIV 191          
BLAST of jgi.p|Trimin1|349024 vs. uniprot
Match: A0A6U3TBX2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TBX2_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 9.080e-11
Identity = 43/97 (44.33%), Postives = 59/97 (60.82%), Query Frame = 0
Query:   57 LEARVAAGDWQGVMTQAQGLDQSFRKRLMGGLRKRFPKESKALKEEALLLCNAVTFDLIAINKAGRS--KDEPAAREALAVLDADVGKFLALEPQLL 151
            LE +++  D+  V+   +  D  FRK  MG  RK      KALK+EA+L+CNAVTFDLI IN+A RS  +D   A + L  + AD+ KFL LE  ++
Sbjct:  123 LEQKISEKDYAAVLEFTKYYDLEFRKAKMGRARKLLT--DKALKDEAVLMCNAVTFDLIGINRASRSGQEDSEVAMKYLVEMRADLKKFLELESTIV 217          
BLAST of jgi.p|Trimin1|349024 vs. uniprot
Match: A0A7S2HE27_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HE27_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.240e-9
Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = 0
Query:   57 LEARVAAGDWQGVMTQAQGLDQSFRKRLMGGLRKRFPKESKALKEEALLLCNAVTFDLIAINKAGRSKDEPA--AREALAVLDADVGKFLALEPQLL 151
            LE +++  D+  +    +  D  FRK  MG  RK      KALK+EA+L+CNAVTFDLI IN+A R   + A  A++ L  + AD+ KFL LE  ++
Sbjct:  141 LEQKISEKDYAALFEFTKYYDLEFRKAKMGRARKLLT--DKALKDEAVLMCNAVTFDLIGINRASRPGQQSAEEAKKYLEEMKADIRKFLDLESTIV 235          
BLAST of jgi.p|Trimin1|349024 vs. uniprot
Match: A0A8J2SRN6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRN6_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.100e-7
Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = 0
Query:   22 AFIVAPAAKEEPAVDVDWSAEFSAVKDAYAAAKEG----LEARVAAGDWQGVMTQAQGLDQSFRKRLMGGLRKRFPKESKALKEEALLLCNAVTFDLIAINKAGRS---KDEPAAREALAVLDADVGKFLALEPQ 149
            AF  AP     PA   DW  EF A+++    A  G    ++ ++AA D+  +    +  D  FRK ++G  RK  PK     ++ A+L+ NAVTFDLI INKA R+   +D+  AR     L  D+  F++LEP+
Sbjct:  301 AFAAAP-----PAYASDWP-EFDAIREELKGAGTGGLAFMQQKIAAKDYGELREFTKQWDLDFRKAVLGKARKAMPKGPD--RDRAVLVANAVTFDLIGINKAIRNIGNEDDAEARRWFDTLVDDIRDFVSLEPR 427          
BLAST of jgi.p|Trimin1|349024 vs. uniprot
Match: A0A448YUZ8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUZ8_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.760e-6
Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = 0
Query:   57 LEARVAAGDWQGVMTQAQGLDQSFRKRLMGGLRKRFPKESKALKEEALLLCNAVTFDLIAINKAGRSKDE--PAAREALAVLDADVGKFLALE 147
            ++ R+  GD+ G++  ++  D  FRKR  G  +K    + K  K +A    NAVTFDLI IN++ RS  E   +A + L  L  DV KFLALE
Sbjct:  177 MQGRIDDGDFAGLLDFSKSYDLEFRKRRFGNAKKLL--QDKEAKSKATEYANAVTFDLIGINRSCRSGQENSDSANKYLQELRDDVNKFLALE 267          
BLAST of jgi.p|Trimin1|349024 vs. uniprot
Match: A0A7S4JK37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JK37_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.890e-5
Identity = 52/136 (38.24%), Postives = 71/136 (52.21%), Query Frame = 0
Query:   23 FIVAPAAKEE-----PAVDVDWSAEFSAVKDAYAAAKEG----LEARVAAGDWQGVMTQAQGLDQSFRKRLMGGLRKRFPKESKALKEEALLLCNAVTFDLIAINKAGRSKDEP--AAREALAVLDADVGKFLALE 147
            F+ AP+A+ +     PA     +A F AV+    +A+      L+  V   ++  +M   +  D +FRK  M   RK F  + KA KE+A +L NAVTFDLI INK+ R   E    A + L  L ADV KFL LE
Sbjct:    1 FVPAPSAEAKESAAPPATPESVAAAFGAVRYQLESAETDGVPRLQYLVETENYPEIMEFTKLYDGAFRKGKMKPARK-FLTDGKA-KEDAQMLSNAVTFDLIGINKSSRPGQESREGAMKYLEELKADVNKFLDLE 134          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349024 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A835YZ48_9STRA4.390e-95100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LSP3_ECTSI2.710e-2243.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2E7S6_TRICV1.100e-1251.06Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A7S1BQ70_9STRA3.090e-1245.56Hypothetical protein n=3 Tax=Corethron hystrix Tax... [more]
A0A7S0K9R3_9STRA8.240e-1145.98Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A6U3TBX2_9STRA9.080e-1144.33Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2HE27_9STRA2.240e-942.27Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A8J2SRN6_9STRA1.100e-736.30Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A448YUZ8_9STRA1.760e-640.86Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4JK37_9STRA2.890e-538.24Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023222PsbQ-like domain superfamilyGENE3D1.20.120.290coord: 33..150
e-value: 4.2E-6
score: 28.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_34contigContig_34:532011..534357 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349024mRNA_8294Tribonema minus UTEX_B_3156 mRNAContig_34 531797..534357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349024|estExt_Genemark1.C_Ctg_340059 ID=Trimin1|349024|estExt_Genemark1.C_Ctg_340059|Name=jgi.p|Trimin1|349024|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=153bp
MKAAARTVLASLALLALNCAHAFIVAPAAKEEPAVDVDWSAEFSAVKDAY
AAAKEGLEARVAAGDWQGVMTQAQGLDQSFRKRLMGGLRKRFPKESKALK
EEALLLCNAVTFDLIAINKAGRSKDEPAAREALAVLDADVGKFLALEPQL
LQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023222PsbQ-like_dom_sf