Trimin1|348755|estExt_Genemark1.C_Ctg_300123 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348755
Unique NameTrimin1|348755|estExt_Genemark1.C_Ctg_300123
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length166
Homology
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BLAST of jgi.p|Trimin1|348755 vs. uniprot
Match: A0A836CF11_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF11_9STRA)

HSP 1 Score: 334 bits (857), Expect = 3.680e-116
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 
Query:    1 RCSAWEKGAWEEGSTGVICARPVKDLLNQEQFKSIRGAFEEWSEEELAAVDRSQLADIFEKNQRQIAIAHKFYKAVQAHLKPGPKLILLHEYGLDSDDPAAEDSATSRVEVPDAADLSRLFSGLGAYGLSKKDDPVQAIRSFDALEPGAEYWPVFAKGSRLSSAG 165
            RCSAWEKGAWEEGSTGVICARPVKDLLNQEQFKSIRGAFEEWSEEELAAVDRSQLADIFEKNQRQIAIAHKFYKAVQAHLKPGPKLILLHEYGLDSDDPAAEDSATSRVEVPDAADLSRLFSGLGAYGLSKKDDPVQAIRSFDALEPGAEYWPVFAKGSRLSSAG
Sbjct:    1 RCSAWEKGAWEEGSTGVICARPVKDLLNQEQFKSIRGAFEEWSEEELAAVDRSQLADIFEKNQRQIAIAHKFYKAVQAHLKPGPKLILLHEYGLDSDDPAAEDSATSRVEVPDAADLSRLFSGLGAYGLSKKDDPVQAIRSFDALEPGAEYWPVFAKGSRLSSAG 165
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BLAST of jgi.p|Trimin1|348755 vs. uniprot
Match: A0A836CN58_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN58_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.810e-17
Identity = 50/82 (60.98%), Postives = 55/82 (67.07%), Query Frame = 0 
Query:    6 EKGAWEEGSTGVICARPVKDLLNQEQFKSIRGAFEEWSEEELAAVDRSQLADIFEKNQRQIAIAHKFYKAVQ----AHLKPG 83
            EK      S     +  VKDLLNQEQFK IRG FE W EE LAAVD+SQ ADIF  NQ+QIAIAHKF+K V+    A LKPG
Sbjct:  115 EKVGCSYSSMSSSSSSSVKDLLNQEQFKLIRGVFESWREEALAAVDKSQFADIFGGNQQQIAIAHKFHKTVRDLQAAQLKPG 196
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348755 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CF11_9STRA3.680e-116100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CN58_9STRA1.810e-1760.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_30contigContig_30:866950..870947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348755mRNA_5424Tribonema minus UTEX_B_3156 mRNAContig_30 866950..870947 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348755|estExt_Genemark1.C_Ctg_300123 ID=Trimin1|348755|estExt_Genemark1.C_Ctg_300123|Name=jgi.p|Trimin1|348755|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=166bp
RCSAWEKGAWEEGSTGVICARPVKDLLNQEQFKSIRGAFEEWSEEELAAV
DRSQLADIFEKNQRQIAIAHKFYKAVQAHLKPGPKLILLHEYGLDSDDPA
AEDSATSRVEVPDAADLSRLFSGLGAYGLSKKDDPVQAIRSFDALEPGAE
YWPVFAKGSRLSSAG*
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