Trimin1|348625|estExt_Genemark1.C_Ctg_280066 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|348625
Unique Name	Trimin1\|348625\|estExt_Genemark1.C_Ctg_280066
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	804

Homology

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BLAST of jgi.p|Trimin1|348625 vs. uniprot
Match: A0A835Z5H1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5H1_9STRA)

HSP 1 Score: 1309 bits (3388), Expect = 0.000e+0
Identity = 803/803 (100.00%), Postives = 803/803 (100.00%), Query Frame = 0

Query:    1 MAAAMHEVRMSSSARAYLRQCLDAGLQQIPAVQGDAGLARLAEALEAAHACASFECITSFSGDHGYPERAGVDVLVCTAIHTLSAGASIPWTQGEVYRFTSEQGLVCAQTLLALDPDAAETVFEQYNLLRHQFGPHSQQVEHFFAACAAPESPQRMVALCCLPHHLVSAVVEGFVVRSVTLAASDAANLLELYDATQVDSQVESGGESRRLLLSDDVRRGVKDKLQGERTGHAGSSQPRVEQAVQDLLRERGYSPCVLRPKLSGSCQLVDRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQLLAQLLANHADDGATRFVVGVLKTCIQLRVKSKLAHYTMKVATQQRPAQESDKKMKYWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGAGEETVDLLILHTFQDVDQYRFHRAEVFMNFYPKFDNAKQLEADKIIQGLWPKGGGSVITGGIKKFKFSYYMYLTMMCRAVIGSVCRPKAGKKELEKKEWLTSCTSRLSTWGMSQLQQVPYMRRLSGWWEYLTAAAARNDHLDAFDFLDAFQQFLREEHHWCDVVAGAGAGGITAGLGGLSLSSSIARPVFLIAGGRATRAYATQLATLLNAPLLTDHKKQKPIPEALSEDRFWGAVVVPNPDALDPPNXXXXXXXXXEGEGGHHQQQPVHIAIAKATAFPPCAVVIADVTHAARDGGKFPAHQWLERARAAGCAVVDLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDSSAEGVAARLLREEREARVLPQLLLPLGCLGT 803
            MAAAMHEVRMSSSARAYLRQCLDAGLQQIPAVQGDAGLARLAEALEAAHACASFECITSFSGDHGYPERAGVDVLVCTAIHTLSAGASIPWTQGEVYRFTSEQGLVCAQTLLALDPDAAETVFEQYNLLRHQFGPHSQQVEHFFAACAAPESPQRMVALCCLPHHLVSAVVEGFVVRSVTLAASDAANLLELYDATQVDSQVESGGESRRLLLSDDVRRGVKDKLQGERTGHAGSSQPRVEQAVQDLLRERGYSPCVLRPKLSGSCQLVDRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQLLAQLLANHADDGATRFVVGVLKTCIQLRVKSKLAHYTMKVATQQRPAQESDKKMKYWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGAGEETVDLLILHTFQDVDQYRFHRAEVFMNFYPKFDNAKQLEADKIIQGLWPKGGGSVITGGIKKFKFSYYMYLTMMCRAVIGSVCRPKAGKKELEKKEWLTSCTSRLSTWGMSQLQQVPYMRRLSGWWEYLTAAAARNDHLDAFDFLDAFQQFLREEHHWCDVVAGAGAGGITAGLGGLSLSSSIARPVFLIAGGRATRAYATQLATLLNAPLLTDHKKQKPIPEALSEDRFWGAVVVPNPDALDPPNXXXXXXXXXEGEGGHHQQQPVHIAIAKATAFPPCAVVIADVTHAARDGGKFPAHQWLERARAAGCAVVDLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDSSAEGVAARLLREEREARVLPQLLLPLGCLGT
Sbjct:    1 MAAAMHEVRMSSSARAYLRQCLDAGLQQIPAVQGDAGLARLAEALEAAHACASFECITSFSGDHGYPERAGVDVLVCTAIHTLSAGASIPWTQGEVYRFTSEQGLVCAQTLLALDPDAAETVFEQYNLLRHQFGPHSQQVEHFFAACAAPESPQRMVALCCLPHHLVSAVVEGFVVRSVTLAASDAANLLELYDATQVDSQVESGGESRRLLLSDDVRRGVKDKLQGERTGHAGSSQPRVEQAVQDLLRERGYSPCVLRPKLSGSCQLVDRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQLLAQLLANHADDGATRFVVGVLKTCIQLRVKSKLAHYTMKVATQQRPAQESDKKMKYWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGAGEETVDLLILHTFQDVDQYRFHRAEVFMNFYPKFDNAKQLEADKIIQGLWPKGGGSVITGGIKKFKFSYYMYLTMMCRAVIGSVCRPKAGKKELEKKEWLTSCTSRLSTWGMSQLQQVPYMRRLSGWWEYLTAAAARNDHLDAFDFLDAFQQFLREEHHWCDVVAGAGAGGITAGLGGLSLSSSIARPVFLIAGGRATRAYATQLATLLNAPLLTDHKKQKPIPEALSEDRFWGAVVVPNPDALDPPNXXXXXXXXXEGEGGHHQQQPVHIAIAKATAFPPCAVVIADVTHAARDGGKFPAHQWLERARAAGCAVVDLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDSSAEGVAARLLREEREARVLPQLLLPLGCLGT 803

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348625 vs. uniprot

BLAST of jgi.p|Trimin1|348625 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z5H1_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 388..409
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..396
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 665..679
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 664..691
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 373..411
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 397..411

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_28	contig	Contig_28:669019..685926 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348625	mRNA_9015	Tribonema minus UTEX_B_3156	mRNA	Contig_28 669019..685926 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|348625|estExt_Genemark1.C_Ctg_280066 ID=Trimin1|348625|estExt_Genemark1.C_Ctg_280066|Name=jgi.p|Trimin1|348625|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=804bp
MAAAMHEVRMSSSARAYLRQCLDAGLQQIPAVQGDAGLARLAEALEAAHA
CASFECITSFSGDHGYPERAGVDVLVCTAIHTLSAGASIPWTQGEVYRFT
SEQGLVCAQTLLALDPDAAETVFEQYNLLRHQFGPHSQQVEHFFAACAAP
ESPQRMVALCCLPHHLVSAVVEGFVVRSVTLAASDAANLLELYDATQVDS
QVESGGESRRLLLSDDVRRGVKDKLQGERTGHAGSSQPRVEQAVQDLLRE
RGYSPCVLRPKLSGSCQLVDRKKAAAAAAEDAIAENPLIGGGGDRVAALI
SEGGGGGSDAGTGDERGEGGRGGGGAAQLLAQLLANHADDGATRFVVGVL
KTCIQLRVKSKLAHYTMKVATQQRPAQESDKKMKYWQRRRMQEKQRRQLQ
QQQQQQNEEDTVQAAAAALGAGEETVDLLILHTFQDVDQYRFHRAEVFMN
FYPKFDNAKQLEADKIIQGLWPKGGGSVITGGIKKFKFSYYMYLTMMCRA
VIGSVCRPKAGKKELEKKEWLTSCTSRLSTWGMSQLQQVPYMRRLSGWWE
YLTAAAARNDHLDAFDFLDAFQQFLREEHHWCDVVAGAGAGGITAGLGGL
SLSSSIARPVFLIAGGRATRAYATQLATLLNAPLLTDHKKQKPIPEALSE
DRFWGAVVVPNPDALDPPNLNPPNPNPPEGEGGHHQQQPVHIAIAKATAF
PPCAVVIADVTHAARDGGKFPAHQWLERARAAGCAVVDLSAGAAASELST
AAAAAELSTAAAAAELSSAEDSSAEGVAARLLREEREARVLPQLLLPLGC
LGT*