Trimin1|348571|estExt_Genemark1.C_Ctg_270046 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348571
Unique NameTrimin1|348571|estExt_Genemark1.C_Ctg_270046
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length402
Homology
BLAST of jgi.p|Trimin1|348571 vs. uniprot
Match: A0A835YZP9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZP9_9STRA)

HSP 1 Score: 717 bits (1852), Expect = 6.200e-260
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0
Query:    1 MTLRMLWYRAACLLVLATLGNAVTCTNSSAVAVPGYKLALTSTSVYELGAIGDYAPPSTTFTEVVTDYAAVSLPWAFNFLGVEYSTVYISRDGFVSFDALSVGAATSGPTSVVPSVVAPSNAIFAFWSNLVYPASSSTYRPRTQYEMADSDTFIVSWFSTETLLEPAGTFELVLHKNGNFDINLSSMAYHFDVEGTNNSLVGWQSQVSSKCICGPSCTASSAESTKGTCDNLFSGTYNWAFSLSATLQYTYGPDCMSGGDLAGKSSSTVMIAAGGACGAGLVLSLLLMFXXXXXXXXXXXAREDAEAEVRRLARLAALDKKSDWDEVGDFRTLGDLTPLETPVSSGETPTGNEGKGRXXXXXXXXXXXXXXXXXDAEEGAAGERTSLTDVPLHMRSDSGGV 401
            MTLRMLWYRAACLLVLATLGNAVTCTNSSAVAVPGYKLALTSTSVYELGAIGDYAPPSTTFTEVVTDYAAVSLPWAFNFLGVEYSTVYISRDGFVSFDALSVGAATSGPTSVVPSVVAPSNAIFAFWSNLVYPASSSTYRPRTQYEMADSDTFIVSWFSTETLLEPAGTFELVLHKNGNFDINLSSMAYHFDVEGTNNSLVGWQSQVSSKCICGPSCTASSAESTKGTCDNLFSGTYNWAFSLSATLQYTYGPDCMSGGDLAGKSSSTVMIAAGGACGAGLVLSLLLMFXXXXXXXXXXXAREDAEAEVRRLARLAALDKKSDWDEVGDFRTLGDLTPLETPVSSGETPTGNEGKGRXXXXXXXXXXXXXXXXXDAEEGAAGERTSLTDVPLHMRSDSGGV
Sbjct:    1 MTLRMLWYRAACLLVLATLGNAVTCTNSSAVAVPGYKLALTSTSVYELGAIGDYAPPSTTFTEVVTDYAAVSLPWAFNFLGVEYSTVYISRDGFVSFDALSVGAATSGPTSVVPSVVAPSNAIFAFWSNLVYPASSSTYRPRTQYEMADSDTFIVSWFSTETLLEPAGTFELVLHKNGNFDINLSSMAYHFDVEGTNNSLVGWQSQVSSKCICGPSCTASSAESTKGTCDNLFSGTYNWAFSLSATLQYTYGPDCMSGGDLAGKSSSTVMIAAGGACGAGLVLSLLLMFXXXXXXXXXXXAREDAEAEVRRLARLAALDKKSDWDEVGDFRTLGDLTPLETPVSSGETPTGNEGKGRXXXXXXXXXXXXXXXXXDAEEGAAGERTSLTDVPLHMRSDSGGV 401          
BLAST of jgi.p|Trimin1|348571 vs. uniprot
Match: A0A382X0W6_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382X0W6_9ZZZZ)

HSP 1 Score: 60.1 bits (144), Expect = 1.570e-6
Identity = 39/123 (31.71%), Postives = 63/123 (51.22%), Query Frame = 0
Query:   71 VSLPWAFNFLGVEYSTVYISRDGFVSFDALSVGAATSGPTSVVPSVVAPSNAIFAFWSNLVYPASSSTYRPRTQYEMADSDTFIVSWFSTET-LLEPAGTFELVLHKNGN--FDINLSSMAYH 190
            V LP+ F+F GV+Y+T+ +  +GF+SF A  + +  + P   VP    PS  +  FW +L   ++ + Y     Y   D++ FIV W +  T       TFEL+L+ +    FD  +  M Y+
Sbjct:  117 VDLPFPFSFYGVDYTTITVCSNGFISFGASELESFRNYP---VPGAGGPSPMVAVFWDDLTTSSNGNVYT----YADPDNEYFIVEWSNMRTDNYNSVNTFELILYNDTAPPFDDGIMKMQYN 232          
BLAST of jgi.p|Trimin1|348571 vs. uniprot
Match: A0A7V2JHG3_9BACT (T9SS type A sorting domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A7V2JHG3_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 4.000e-6
Identity = 45/152 (29.61%), Postives = 74/152 (48.68%), Query Frame = 0
Query:   71 VSLPWAFNFLGVEYSTVYISRDGFVSFDALSVGAATSGPTSVVPSVVAPSNAIFAFWSNLVYPASSSTYRPRTQYEMADSDTFIVSWFSTETLL----EPAGTFELVLHKNG---------NFDINLSSMAYHFDVEGTNNSLVGWQSQVSS 209
            + LPWAF+F G EY++++I   G+V FD   V   +S  TS+ P   AP  AIF +W N+      + Y  +T       + FI++W     L     +    F+LVL ++G         N D+N +++  + D  G++  L  + + V S
Sbjct:  601 IQLPWAFDFYGTEYNSLWICESGYVMFDEPGVAYGSSSNTSL-PRPYAPKPAIFPYWDNIGTDEGGNIYASQT------GNAFIITWNDLHHLEWETDDGPYRFQLVLTRDGAIHTQYADMNGDVNSATIGIN-DENGSSGLLTAFNTGVPS 744          
BLAST of jgi.p|Trimin1|348571 vs. uniprot
Match: I4HEZ4_MICAE (PEP-CTERM domain-containing protein n=1 Tax=Microcystis aeruginosa PCC 9807 TaxID=1160283 RepID=I4HEZ4_MICAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.130e-5
Identity = 38/114 (33.33%), Postives = 61/114 (53.51%), Query Frame = 0
Query:   70 AVSLPWAFNFLGVEYSTVYISRDGFVSFDALSVGAATSGPTSVVPSVVAPSNAIFAFWSNLVYPASSSTYRPRTQYEMADS---DTFIVSWFSTETLLE-PAGTFELVLHKNGN 179
            A+SL + F+F G  YS VY+S +GF++F+  S     SGP S+      PSN +  FW++L  P +    +P   Y+   S     F+V +++     + P  TFE++LH+  N
Sbjct:   77 AISLGFNFDFYGNTYSQVYVSSNGFLTFNPGSDDGCCSGP-SLPDGNSDPSNLVAGFWNDLYPPLT----QPNIFYQTTGSPGSQEFVVGFYNVPNFFDGPQVTFEMILHEGSN 185          
BLAST of jgi.p|Trimin1|348571 vs. uniprot
Match: A0A2M7WKM0_9BACT (Por_Secre_tail domain-containing protein (Fragment) n=1 Tax=candidate division Zixibacteria bacterium CG_4_9_14_3_um_filter_46_8 TaxID=1975520 RepID=A0A2M7WKM0_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 5.400e-5
Identity = 35/123 (28.46%), Postives = 64/123 (52.03%), Query Frame = 0
Query:   66 TDYAAVSLPWAFNFLGVEYSTVYISRDGFVSFDALSVGAATSGPTSVVPSVVAPSNAIFAFWSNLVYPASSSTYRPRTQYEMADSDTFIVSWFSTETLLEPAG-TFELVLHKNGNFDINLSSM 187
            T+    +LP+ FN+ GV Y+++ +  +G++SF++ S    TS   + +PS  AP+N + A W +L   A+ + YR  T      +DT I++W +     +    TFE+++   G       +M
Sbjct:  172 TNTGPYTLPFVFNYYGVNYNSIRVCSNGWISFNSSS----TSYSNTNIPSPSAPTNMLGAMWDDLNPGAAGTVYRYIT------ADTAIIAWVNVPHYYDSGSYTFEIIITSGGAITFQYQTM 284          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348571 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YZP9_9STRA6.200e-260100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A382X0W6_9ZZZZ1.570e-631.71Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A7V2JHG3_9BACT4.000e-629.61T9SS type A sorting domain-containing protein n=2 ... [more]
I4HEZ4_MICAE1.130e-533.33PEP-CTERM domain-containing protein n=1 Tax=Microc... [more]
A0A2M7WKM0_9BACT5.400e-528.46Por_Secre_tail domain-containing protein (Fragment... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 295..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..352
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 335..401

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_27contigContig_27:423440..426397 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348571mRNA_6923Tribonema minus UTEX_B_3156 mRNAContig_27 423440..426397 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348571|estExt_Genemark1.C_Ctg_270046 ID=Trimin1|348571|estExt_Genemark1.C_Ctg_270046|Name=jgi.p|Trimin1|348571|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=402bp
MTLRMLWYRAACLLVLATLGNAVTCTNSSAVAVPGYKLALTSTSVYELGA
IGDYAPPSTTFTEVVTDYAAVSLPWAFNFLGVEYSTVYISRDGFVSFDAL
SVGAATSGPTSVVPSVVAPSNAIFAFWSNLVYPASSSTYRPRTQYEMADS
DTFIVSWFSTETLLEPAGTFELVLHKNGNFDINLSSMAYHFDVEGTNNSL
VGWQSQVSSKCICGPSCTASSAESTKGTCDNLFSGTYNWAFSLSATLQYT
YGPDCMSGGDLAGKSSSTVMIAAGGACGAGLVLSLLLMFLMYRRIQRRRR
AREDAEAEVRRLARLAALDKKSDWDEVGDFRTLGDLTPLETPVSSGETPT
GNEGKGRGSGGSGGGSGGGSSGGGDAEEGAAGERTSLTDVPLHMRSDSGG
V*
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