Trimin1|348541|estExt_Genemark1.C_Ctg_260112 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348541
Unique NameTrimin1|348541|estExt_Genemark1.C_Ctg_260112
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length484
Homology
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BLAST of jgi.p|Trimin1|348541 vs. uniprot
Match: A0A835YYU7_9STRA (Cnn_1N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYU7_9STRA)

HSP 1 Score: 768 bits (1982), Expect = 5.420e-277
Identity = 483/483 (100.00%), Postives = 483/483 (100.00%), Query Frame = 0 
Query:    1 MTTPLTRAAGGSAPGSPRSIASDRRAPHTQPSPRSGXXXXXXSDARAWGDDVPRRLTLSPGGASPTASSHRRPGSASTSRNPSVYGEPAWLDGNDEPYISAQQQPYSSAQGDRGHPQRRASVSLQQSQKRLAELERSEFDLKMRLHFLEERLRSTLNGEETLDLHYQNIXXXXXXXXXXXXXXXXRNTGAQATRDNEQLRVKNDRLSKELAAQKSDREAAQAAAEERLSQQVAALESRLRKEQADHEVTRLTCEEVVQGMRDELQRSTEAGRHSDDFADRTRVLMSTGERREHTLEAMTMNVLALKAELQQTATQLTHKDLEMQRLRQMEQEAAXXXXXXXXXXXXXXXXXXXXXXXXXEQRRGAEATAAALRQLHEVQSKAEAVTVMGAEEVCRQSAALSNAQRQLQEKEREYQQMKAELESTGADVAEARGELRRSKEASRQGEEGRMVHLAARATEEREAMAAELAQPQRYIFASCHVPG 483
            MTTPLTRAAGGSAPGSPRSIASDRRAPHTQPSPRSGXXXXXXSDARAWGDDVPRRLTLSPGGASPTASSHRRPGSASTSRNPSVYGEPAWLDGNDEPYISAQQQPYSSAQGDRGHPQRRASVSLQQSQKRLAELERSEFDLKMRLHFLEERLRSTLNGEETLDLHYQNIXXXXXXXXXXXXXXXXRNTGAQATRDNEQLRVKNDRLSKELAAQKSDREAAQAAAEERLSQQVAALESRLRKEQADHEVTRLTCEEVVQGMRDELQRSTEAGRHSDDFADRTRVLMSTGERREHTLEAMTMNVLALKAELQQTATQLTHKDLEMQRLRQMEQEAAXXXXXXXXXXXXXXXXXXXXXXXXXEQRRGAEATAAALRQLHEVQSKAEAVTVMGAEEVCRQSAALSNAQRQLQEKEREYQQMKAELESTGADVAEARGELRRSKEASRQGEEGRMVHLAARATEEREAMAAELAQPQRYIFASCHVPG
Sbjct:    1 MTTPLTRAAGGSAPGSPRSIASDRRAPHTQPSPRSGXXXXXXSDARAWGDDVPRRLTLSPGGASPTASSHRRPGSASTSRNPSVYGEPAWLDGNDEPYISAQQQPYSSAQGDRGHPQRRASVSLQQSQKRLAELERSEFDLKMRLHFLEERLRSTLNGEETLDLHYQNIXXXXXXXXXXXXXXXXRNTGAQATRDNEQLRVKNDRLSKELAAQKSDREAAQAAAEERLSQQVAALESRLRKEQADHEVTRLTCEEVVQGMRDELQRSTEAGRHSDDFADRTRVLMSTGERREHTLEAMTMNVLALKAELQQTATQLTHKDLEMQRLRQMEQEAAXXXXXXXXXXXXXXXXXXXXXXXXXEQRRGAEATAAALRQLHEVQSKAEAVTVMGAEEVCRQSAALSNAQRQLQEKEREYQQMKAELESTGADVAEARGELRRSKEASRQGEEGRMVHLAARATEEREAMAAELAQPQRYIFASCHVPG 483
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348541 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YYU7_9STRA5.420e-277100.00Cnn_1N domain-containing protein n=1 Tax=Tribonema... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 400..434
NoneNo IPR availableCOILSCoilCoilcoord: 225..245
NoneNo IPR availableCOILSCoilCoilcoord: 168..223
NoneNo IPR availableCOILSCoilCoilcoord: 319..346
NoneNo IPR availableCOILSCoilCoilcoord: 117..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 425..456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..84
IPR012943Centrosomin, N-terminal motif 1PFAMPF07989Cnn_1Ncoord: 124..194
e-value: 5.4E-10
score: 39.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_26contigContig_26:849957..866335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348541mRNA_2002Tribonema minus UTEX_B_3156 mRNAContig_26 847396..866335 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348541|estExt_Genemark1.C_Ctg_260112 ID=Trimin1|348541|estExt_Genemark1.C_Ctg_260112|Name=jgi.p|Trimin1|348541|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=484bp
MTTPLTRAAGGSAPGSPRSIASDRRAPHTQPSPRSGGGGGGGSDARAWGD
DVPRRLTLSPGGASPTASSHRRPGSASTSRNPSVYGEPAWLDGNDEPYIS
AQQQPYSSAQGDRGHPQRRASVSLQQSQKRLAELERSEFDLKMRLHFLEE
RLRSTLNGEETLDLHYQNIDLNHQVEELKQELKQARNTGAQATRDNEQLR
VKNDRLSKELAAQKSDREAAQAAAEERLSQQVAALESRLRKEQADHEVTR
LTCEEVVQGMRDELQRSTEAGRHSDDFADRTRVLMSTGERREHTLEAMTM
NVLALKAELQQTATQLTHKDLEMQRLRQMEQEAAMLKQELGARSTQVTSL
QNEVRRLKREQRRGAEATAAALRQLHEVQSKAEAVTVMGAEEVCRQSAAL
SNAQRQLQEKEREYQQMKAELESTGADVAEARGELRRSKEASRQGEEGRM
VHLAARATEEREAMAAELAQPQRYIFASCHVPG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012943Cnn_1N