Trimin1|348513|estExt_Genemark1.C_Ctg_250124 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348513
Unique NameTrimin1|348513|estExt_Genemark1.C_Ctg_250124
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length260
Homology
BLAST of jgi.p|Trimin1|348513 vs. uniprot
Match: A0A836CGJ2_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGJ2_9STRA)

HSP 1 Score: 495 bits (1274), Expect = 1.290e-176
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
Query:    1 MLRNVYRYSGGASGDAAAGDVKDVVAGGLYSFLQLPPSATAAETARVIFAKLAGLGIIVGSMGMKLPQIMRILEARSVLGLSLTANYFEVPLVSNGVIYHFKKGYPFSAYGENAFLLVQNLIVVALMWRYSAPPMKHRAMAAMTATFVALCVGTYSLPDRWQPLLVLSSTPLILLVTIPQILVNARQGHTGQMSAITVALKLGGSAIRLATTLIEIGVDRALLLNYGLGTVLNGVLMAQWYLMRDATQAAIEFKGEHSE 259
            MLRNVYRYSGGASGDAAAGDVKDVVAGGLYSFLQLPPSATAAETARVIFAKLAGLGIIVGSMGMKLPQIMRILEARSVLGLSLTANYFEVPLVSNGVIYHFKKGYPFSAYGENAFLLVQNLIVVALMWRYSAPPMKHRAMAAMTATFVALCVGTYSLPDRWQPLLVLSSTPLILLVTIPQILVNARQGHTGQMSAITVALKLGGSAIRLATTLIEIGVDRALLLNYGLGTVLNGVLMAQWYLMRDATQAAIEFKGEHSE
Sbjct:    1 MLRNVYRYSGGASGDAAAGDVKDVVAGGLYSFLQLPPSATAAETARVIFAKLAGLGIIVGSMGMKLPQIMRILEARSVLGLSLTANYFEVPLVSNGVIYHFKKGYPFSAYGENAFLLVQNLIVVALMWRYSAPPMKHRAMAAMTATFVALCVGTYSLPDRWQPLLVLSSTPLILLVTIPQILVNARQGHTGQMSAITVALKLGGSAIRLATTLIEIGVDRALLLNYGLGTVLNGVLMAQWYLMRDATQAAIEFKGEHSE 259          
BLAST of jgi.p|Trimin1|348513 vs. uniprot
Match: L1ID68_GUITC (Mannose-P-dolichol utilization defect 1 protein homolog n=3 Tax=Guillardia theta TaxID=55529 RepID=L1ID68_GUITC)

HSP 1 Score: 190 bits (482), Expect = 1.800e-56
Identity = 101/202 (50.00%), Postives = 135/202 (66.83%), Query Frame = 0
Query:   46 RVIFAKLAGLGIIVGSMGMKLPQIMRILEARSVLGLSLTANYFEVPLVSNGVIYHFKKGYPFSAYGENAFLLVQNLIVVALMWRYSAPPMKHRAMAAMTATFVALCVGTYSLPDRWQPLLVLSSTPLILLVTIPQILVNARQGHTGQMSAITVALKLGGSAIRLATTLIEIGVDRALLLNYGLGTVLNGVLMAQWYLMRDAT 247
            +V+ +K  G GI+VGS+ +++PQ++RIL +RSV+GLS TA Y EVP+ S+ VIYHF  GYP + YGEN  +L+QNLIVVAL+W +  P +  R M   T +FV LC    SLP    P L+  + P I   T+PQIL NARQGHTGQ+S +T  LKL G  +R+ TT+ +IG+D  LLL Y  G  +N  L+ Q +  RDAT
Sbjct:   27 QVMVSKFLGYGILVGSLFLQVPQLLRILLSRSVVGLSATARYSEVPINSSSVIYHFLLGYPLACYGENIVVLIQNLIVVALIWAWRTPRVPVREMLFCTLSFVVLCAAQLSLPKELLPWLIYVNIPFIFGSTVPQILANARQGHTGQLSILTCFLKLVGCCVRIFTTITQIGLDPGLLLGYFAGASMNLTLVLQGFYYRDAT 228          
BLAST of jgi.p|Trimin1|348513 vs. uniprot
Match: A0A6T7RA07_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A6T7RA07_9CRYP)

HSP 1 Score: 177 bits (448), Expect = 1.550e-50
Identity = 93/192 (48.44%), Postives = 128/192 (66.67%), Query Frame = 0
Query:   46 RVIFAKLAGLGIIVGSMGMKLPQIMRILEARSVLGLSLTANYFEVPLVSNGVIYHFKKGYPFSAYGENAFLLVQNLIVVALMWRYSAPPMKHRAMAAMTATFVALCVGTYSLPDRWQPLLVLSSTPLILLVTIPQILVNARQGHTGQMSAITVALKLGGSAIRLATTLIEIGVDRALLLNYGLGTVLNGVLM 237
            +V+ +K  G GI+VGS+ +++PQ++RIL +RSV+G+S TA Y EVP+ S+ VIYHF  GYP + YGEN  +L+QNLIVVAL+W +  P +  R M     +F  LCV   SLP    P L+  + P I   T+PQI+ NARQGHTGQ+S +T  LKL G  +R+ TT+ +IG+D  LLL Y  G  +N  L+
Sbjct:   74 QVLVSKFLGYGILVGSLFLQVPQLLRILLSRSVVGISATARYSEVPINSSSVIYHFLLGYPLACYGENIVVLIQNLIVVALIWAWRTPRVPVREMVFCLVSFALLCVCQLSLPKELLPWLIYVNIPFIFGSTVPQIVANARQGHTGQLSILTCFLKLVGCCVRIFTTITQIGLDPGLLLGYIAGATMNLTLV 265          
BLAST of jgi.p|Trimin1|348513 vs. uniprot
Match: A0A8K1CVN7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CVN7_PYTOL)

HSP 1 Score: 160 bits (405), Expect = 7.250e-45
Identity = 88/206 (42.72%), Postives = 128/206 (62.14%), Query Frame = 0
Query:   46 RVIFAKLAGLGIIVGSMGMKLPQIMRILEARSVLGLSLTANYFEVPLVSNGVIYHFKKGYPFSAYGENAFLLVQNLIVVALMWRYSAPPMKHRAMAAMTATFVALCVGTYSLPDRWQPLLVLSSTPLILLVTIPQILVNARQGHTGQMSAITVALKLGGSAIRLATTLIEIGVDRALLLNYGLGTVLNGVLMAQWYLMRDATQAAI 251
            + + +KL G  II GS  +KLPQI++I+ A+ V GL+ T+ Y EV L  +G +Y+  KGYP S +GEN  +LVQN+I+V L+W YS P +      A+  TFVA+  G    P   Q +LV +  P+ ++  IPQ++ N +QGHTGQ++ +T+ L  GG+  RL TTL E G D+  L+  G+  VLNG+L+ Q  L   AT  A+
Sbjct:   36 KFVVSKLLGYAIITGSFVLKLPQILKIIGAKDVTGLTPTSFYMEVLLYVSGTVYNVLKGYPVSTWGENLVILVQNIILVLLLWAYSTPKIPISTRLALVVTFVAVTTGMLLTPPELQWVLVSAGIPVTIVARIPQVISNFKQGHTGQLAFVTLVLNFGGTIARLFTTLQETG-DQVQLIGLGVAIVLNGLLVLQVLLFWGATNKAL 240          
BLAST of jgi.p|Trimin1|348513 vs. uniprot
Match: A0A5D6XZP8_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZP8_9STRA)

HSP 1 Score: 158 bits (400), Expect = 7.640e-44
Identity = 85/206 (41.26%), Postives = 125/206 (60.68%), Query Frame = 0
Query:   46 RVIFAKLAGLGIIVGSMGMKLPQIMRILEARSVLGLSLTANYFEVPLVSNGVIYHFKKGYPFSAYGENAFLLVQNLIVVALMWRYSAPPMKHRAMAAMTATFVALCVGTYSLPDRWQPLLVLSSTPLILLVTIPQILVNARQGHTGQMSAITVALKLGGSAIRLATTLIEIGVDRALLLNYGLGTVLNGVLMAQWYLMRDATQAAI 251
            +++ +K  G  II GS+ +KLPQI++IL AR V GL+  + Y EV L  +  +Y+  KGYP S +GEN  +L QN+++V L+W Y  P + +    A+   FVA+  G    P  +Q LL  +  P+ ++  IPQI+ N +QGHTGQ++ +T+ L  GGS  R+ TTL E G D   LL +G+G +LNG L+ Q  L   AT  A+
Sbjct:   59 KLVVSKALGYAIIAGSLVLKLPQILKILRARDVTGLTPASFYLEVLLFVSSTVYNVLKGYPVSTWGENLIILAQNIVLVLLLWTYVTPKIAYSTRLALVVAFVAVTAGALLTPPEYQWLLASAGIPVSIVARIPQIVSNFKQGHTGQLAFVTLVLNFGGSVARIFTTLQETG-DPVQLLGFGVGILLNGTLVLQVLLFWGATNKAL 263          
BLAST of jgi.p|Trimin1|348513 vs. uniprot
Match: A0A7S2TQL9_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TQL9_9EUKA)

HSP 1 Score: 157 bits (397), Expect = 2.800e-43
Identity = 85/216 (39.35%), Postives = 134/216 (62.04%), Query Frame = 0
Query:   35 LPPSATAAETARVIFAKLAGLGIIVGSMGMKLPQIMRILEARSVLGLSLTANYFEVPLVSNGVIYHFKKGYPFSAYGENAFLLVQNLIVVALMWRYSAPPMKHRAMAAMTATFVALCVGTYSLPDRWQPLLVLSSTPLILLVTIPQILVNARQGHTGQMSAITVALKLGGSAIRLATTLIEIGVDRALLLNYGLGTVLNGVLMAQWYLMRDATQAA 250
            L   A +    +V  +K  G  ++ GS  +++PQI++I  A+S  G+S  + Y+ VP+ S+ V+YH  + YPFS YGEN  +L+QN  +V L+W Y+  P+K   +A +T  FVA+    + LP   +P L+ ++ P +L   +PQI+ N R G+TGQ++ +  ALK  G A+R+ TTL +IG+D ALL N+ L  VLN +L+ Q ++MR+ T  A
Sbjct:   60 LKARAASENVLQVALSKAFGYSLMTGSFMLEVPQIVKIWAAKSAKGISAASRYWAVPMYSSSVVYHILEKYPFSCYGENLVILLQNFAIVGLLWYYNRTPVKE--VAGVTGAFVAMTALQFQLPPGLRPALIYANIPCMLGAYVPQIVENHRAGNTGQLAILPAALKCVGCAMRVFTTLTQIGMDIALLANFILSLVLNAILVFQGWVMRENTARA 273          
BLAST of jgi.p|Trimin1|348513 vs. uniprot
Match: A0A024TCH2_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024TCH2_9STRA)

HSP 1 Score: 156 bits (394), Expect = 3.120e-43
Identity = 93/222 (41.89%), Postives = 138/222 (62.16%), Query Frame = 0
Query:   30 YSFLQLPPSATAAETARVIFAKLAGLGIIVGSMGMKLPQIMRILEARSVLGLSLTANYFEVPLVSNGVIYHFKKGYPFSAYGENAFLLVQNLIVVALMWRYSAPPMKHRAMAAMTATFVALCVGTYSLPDRWQPLLVLSSTPLILLVTIPQILVNARQGHTGQMSAITVALKLGGSAIRLATTLIEIGVDRALLLNYGLGTVLNGVLMAQWYLMRDATQAAI 251
            + FLQ+       E  + + +KL G  II+GS  +KLPQI++I+ A +V GL+ ++ Y EV      V+Y+  KGYP S++GE+A +L+QN I+V L+W YS      + +  +T  FVAL  G + LP  +  LL  +S PL ++  IPQI+ N +QGHTGQ++ +T+ L  GGSA RL TTL E G D+ +L  + +  +LNG L+AQ  L   AT+AA+
Sbjct:   28 FDFLQI-------ECGKAVVSKLLGYLIILGSFILKLPQILKIVAAGNVAGLNPSSFYLEVITFQASVVYNVLKGYPISSWGESAVILIQNAILVLLLWHYSGAAKSTQFLGVVT--FVALGAGMFYLPSEFNWLLPSASIPLSVMARIPQIMSNFQQGHTGQLAFLTLFLNFGGSAARLFTTLQETG-DQVVLFGFAISMLLNGTLLAQIGLYWSATEAAM 239          
BLAST of jgi.p|Trimin1|348513 vs. uniprot
Match: A0A6G0XK20_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XK20_9STRA)

HSP 1 Score: 155 bits (393), Expect = 4.410e-43
Identity = 93/222 (41.89%), Postives = 136/222 (61.26%), Query Frame = 0
Query:   30 YSFLQLPPSATAAETARVIFAKLAGLGIIVGSMGMKLPQIMRILEARSVLGLSLTANYFEVPLVSNGVIYHFKKGYPFSAYGENAFLLVQNLIVVALMWRYSAPPMKHRAMAAMTATFVALCVGTYSLPDRWQPLLVLSSTPLILLVTIPQILVNARQGHTGQMSAITVALKLGGSAIRLATTLIEIGVDRALLLNYGLGTVLNGVLMAQWYLMRDATQAAI 251
            + FLQ+       E  + + +K+ G  II+GS  +KLPQI++I+ A +V GLS ++ Y EV      VIY+  +GYP S +GE+A +LVQN+I+V L+W YS+ P   + +  +T  FV L  G Y LP  +  +L  +S PL +   IPQI+ N RQGHTGQ++ +T+ L  GGSA RL TTL E G D+ +LL + +  +LNG L+ Q  +   AT A +
Sbjct:   28 FDFLQV-------ECGKAVVSKVLGYLIILGSFVLKLPQILKIVAAGNVAGLSPSSFYLEVVTFLASVIYNVIRGYPISTWGESAVILVQNVILVVLLWYYSSAPKTTQLLGVVT--FVGLGAGMYHLPSEFDWVLPSASIPLSVAARIPQIISNFRQGHTGQLAFLTLFLNFGGSAARLFTTLQETG-DQVVLLGFAISMLLNGTLLTQILIYWKATDAVL 239          
BLAST of jgi.p|Trimin1|348513 vs. uniprot
Match: A0A8J5X6H1_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X6H1_DIALT)

HSP 1 Score: 154 bits (389), Expect = 3.340e-42
Identity = 86/205 (41.95%), Postives = 124/205 (60.49%), Query Frame = 0
Query:   39 ATAAETARVIFAKLAGLGIIVGSMGMKLPQIMRILEARSVLGLSLTANYFEVPLVSNGVIYHFKKGYPFSAYGENAFLLVQNLIVVALMWRYSAPPMKHRAMAAMTATFVALCVGTYSLPDRWQPLLVLSSTPLILLVTIPQILVNARQGHTGQMSAITVALKLGGSAIRLATTLIEIGVDRALLLNYGLGTVLNGVLMAQWYLM 243
            A AA T     + L G G+++GS+G+KLPQI  +L +RS  GLSL   Y EVP+ ++  IYH + GYP   Y EN  +  QN+ +V + W    PP+ H  M A+    V+L +G ++LP R+QPL+  +    +L   +PQI +NAR G TG +S++T AL+  G +IRL TTL+ IG D+ALL  YGL     G ++ Q  L+
Sbjct:   55 APAARTLERACSALFGAGMVLGSLGLKLPQIALLLRSRSTAGLSLAGCYGEVPMCASFAIYHARLGYPLDTYAENVVIAAQNVAIVLIYWWLDPPPVMH--MLAVATLGVSLHLGLWALPARYQPLIAHAQPLAMLWGYVPQIALNARLGCTGSLSSVTTALRFAGCSIRLLTTLLRIGQDKALLAAYGLAAGCTGAMLLQLALL 257          
BLAST of jgi.p|Trimin1|348513 vs. uniprot
Match: A0A7S2V5B2_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5B2_9STRA)

HSP 1 Score: 152 bits (385), Expect = 6.920e-42
Identity = 80/191 (41.88%), Postives = 126/191 (65.97%), Query Frame = 0
Query:   49 FAKLAGLGIIVGSMGMKLPQIMRILEARSVLGLSLTANYFEVPLVSNGVIYHFKKGYPFSAYGENAFLLVQNLIVVALMWRYSAPPMKHRAMAAMTATFVALCVGTYSLPDRWQPLLVLSSTPLILLVTIPQILVNARQGHTGQMSAITVALKLGGSAIRLATTLIEIGVDRALLLNYGLGTVLNGVLMAQ 239
            F+KL G  + +GS+G+KLPQI++IL+++SV GLS ++ Y E  L    ++YHF  G P+SA+GE   + VQNL++V L+WRY+ P +   +   + A F A+    +  P   QPL+ L++ P+I++  +PQIL+N + GHTGQ++ ITV +   GS  R+ TT+IE+G D  L+L+Y +G+ LN  +  Q
Sbjct:   38 FSKLLGYALSLGSLGLKLPQILKILKSKSVEGLSPSSFYSEEALYVLCLMYHFIIGSPWSAFGEVISIFVQNLVLVGLLWRYAKPTIGLTSRLLVLAVFAAIAAACWYCPPSLQPLIPLANVPVIVMARVPQILLNFKNGHTGQLAFITVCMNAFGSLSRVLTTIIEVGGDWGLVLSYSVGSSLNTFIFLQ 228          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348513 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CGJ2_9STRA1.290e-176100.00Mannose-P-dolichol utilization defect 1 protein ho... [more]
L1ID68_GUITC1.800e-5650.00Mannose-P-dolichol utilization defect 1 protein ho... [more]
A0A6T7RA07_9CRYP1.550e-5048.44Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A8K1CVN7_PYTOL7.250e-4542.72Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XZP8_9STRA7.640e-4441.26Mannose-P-dolichol utilization defect 1 protein ho... [more]
A0A7S2TQL9_9EUKA2.800e-4339.35Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A024TCH2_9STRA3.120e-4341.89Mannose-P-dolichol utilization defect 1 protein ho... [more]
A0A6G0XK20_9STRA4.410e-4341.89Mannose-P-dolichol utilization defect 1 protein ho... [more]
A0A8J5X6H1_DIALT3.340e-4241.95Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S2V5B2_9STRA6.920e-4241.88Mannose-P-dolichol utilization defect 1 protein ho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006603PQ-loop repeatSMARTSM00679ctnscoord: 175..206
e-value: 1.8E-4
score: 30.9
coord: 63..94
e-value: 15.0
score: 4.7
IPR006603PQ-loop repeatPFAMPF04193PQ-loopcoord: 50..85
e-value: 1.7E-4
score: 21.3
coord: 168..214
e-value: 1.7E-6
score: 27.7
NoneNo IPR availableGENE3D1.20.1280.290coord: 143..247
e-value: 3.5E-5
score: 25.8
IPR016817Mannose-P-dolichol utilization defect 1 proteinPIRSFPIRSF023381Mpdu1coord: 30..259
e-value: 4.2E-49
score: 164.8
IPR016817Mannose-P-dolichol utilization defect 1 proteinPANTHERPTHR12226MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATEDcoord: 42..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_25contigContig_25:995857..1005431 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348513mRNA_6708Tribonema minus UTEX_B_3156 mRNAContig_25 995857..1005769 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348513|estExt_Genemark1.C_Ctg_250124 ID=Trimin1|348513|estExt_Genemark1.C_Ctg_250124|Name=jgi.p|Trimin1|348513|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=260bp
MLRNVYRYSGGASGDAAAGDVKDVVAGGLYSFLQLPPSATAAETARVIFA
KLAGLGIIVGSMGMKLPQIMRILEARSVLGLSLTANYFEVPLVSNGVIYH
FKKGYPFSAYGENAFLLVQNLIVVALMWRYSAPPMKHRAMAAMTATFVAL
CVGTYSLPDRWQPLLVLSSTPLILLVTIPQILVNARQGHTGQMSAITVAL
KLGGSAIRLATTLIEIGVDRALLLNYGLGTVLNGVLMAQWYLMRDATQAA
IEFKGEHSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006603PQ-loop_rpt
IPR016817MannP-dilichol_defect-1