Trimin1|348497|estExt_Genemark1.C_Ctg_250077 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348497
Unique NameTrimin1|348497|estExt_Genemark1.C_Ctg_250077
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length373
Homology
BLAST of jgi.p|Trimin1|348497 vs. uniprot
Match: A0A835YZR0_9STRA (DUF4149 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZR0_9STRA)

HSP 1 Score: 503 bits (1294), Expect = 6.040e-176
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0
Query:    1 MKPLAAFALLLVADVPSLAFVVRTPVGESLKQQHIATAFPANRSSTATTVLASTQNAEXXXXXXXXXXXXXXXXXXXXXXXXXXSGPKGVAGLSAWDPSSRQASAKWMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPADAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELENRGEAKGAEYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLARVRDAAA 300
            MKPLAAFALLLVADVPSLAFVVRTPVGESLKQQHIATAFPANRSSTATTVLASTQNAEXXXXXXXXXXXXXXXXXXXXXXXXXXSGPKGVAGLSAWDPSSRQASAKWMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPADAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELENRGEAKGAEYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLARVRDAAA
Sbjct:    1 MKPLAAFALLLVADVPSLAFVVRTPVGESLKQQHIATAFPANRSSTATTVLASTQNAEXXXXXXXXXXXXXXXXXXXXXXXXXXSGPKGVAGLSAWDPSSRQASAKWMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPADAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELENRGEAKGAEYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLARVRDAAA 300          
BLAST of jgi.p|Trimin1|348497 vs. uniprot
Match: D8LRR6_ECTSI (DUF4149 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRR6_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 2.130e-50
Identity = 105/211 (49.76%), Postives = 138/211 (65.40%), Query Frame = 0
Query:   85 SGPKGVAGLSAWDPSSRQASAKWMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPADAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELENRGEAKGAEYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLARV 295
            +GP GV  LS WDPS++QA   ++QPA+HN NPVRVAA++ A GLA++G++      +   VH+++    +GSTL+TTF AGI M +NLPRQTFGKLQSKLFP YF  N +  LA+ + + G      +   A V L  +L   L NL +LEP+ST +ML RY+LE+  +    EY  L + FGK HGMSS  NLGAL G+  YAW LA V
Sbjct:   49 AGPSGVQSLSKWDPSAQQA---FIQPAIHNKNPVRVAAILTAAGLASKGAMLVPGN-LAKMVHMVALNAWMGSTLWTTFFAGITMMRNLPRQTFGKLQSKLFPLYFQFNFVSILAIYI-IRGCP----LRTRAGVTLLVSLFSTLLNLVLLEPKSTSIMLERYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELASV 250          
BLAST of jgi.p|Trimin1|348497 vs. uniprot
Match: A0A0G4F9E7_VITBC (DUF4149 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F9E7_VITBC)

HSP 1 Score: 167 bits (424), Expect = 8.980e-46
Identity = 101/207 (48.79%), Postives = 131/207 (63.29%), Query Frame = 0
Query:   88 KGVAGLSAWDPSSRQASAKWMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPADAAVP-LAAALVCNLGNLFVLEPRSTGVMLARYELENRGEAKGAEYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLA 293
            K +AGL  WDP        W+ PAVHN N VR+ AL++ + L A GS    S  +  FVH+L++   +GS +YTTF+AGI MF+NLPR+TFG+LQSKLFP YF    +C   ML+ L     +  +P  A +  LA ALV  L NLFVLEP+ST +M  RYE+E++G     EY  L++ FGK HG+SSL NL AL G  A+ W LA
Sbjct:   92 KQMAGLERWDPQV------WVAPAVHNRNSVRLLALLSTL-LLASGSTVFVSKQLTLFVHLLAYATWLGSVIYTTFVAGITMFRNLPRKTFGRLQSKLFPLYF---QLCT-GMLIVLLTTGGASVLPNRAMMANLAVALVMTLANLFVLEPKSTEIMFKRYEMEDQGRKDDPEYKALAKGFGKFHGLSSLTNLIALCGGVAHGWTLA 287          
BLAST of jgi.p|Trimin1|348497 vs. uniprot
Match: A0A7S3RBJ6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RBJ6_9SPIT)

HSP 1 Score: 162 bits (410), Expect = 6.410e-45
Identity = 95/186 (51.08%), Postives = 119/186 (63.98%), Query Frame = 0
Query:  107 WMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPADAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELENRGEAKGAEYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHL 292
            W+ PA+ N    R A++  A+ LAA GS     A M  F H++SFG L GS +YTTF AGI MFKNLPRQTFG+LQSKLFP YF L++     ML TL  ++S G +         +AL+  L NLF LEP+ST VM  RY+LEN G+ +  EY   ++ FG LHGMSSL NLGAL G  A++W L
Sbjct:    5 WVPPAIWNTPAFRAASIATALALAAAGS-RQLGARMAIFAHLISFGSLFGSMIYTTFFAGITMFKNLPRQTFGRLQSKLFPIYFKLHAASLCVMLGTLRAVASGGSLTRPV-YACGSALLFTLLNLFYLEPQSTKVMFTRYDLENEGKQESDEYKVAAKKFGPLHGMSSLANLGALIGVIAHSWWL 188          
BLAST of jgi.p|Trimin1|348497 vs. uniprot
Match: A0A1Z5KI85_FISSO (DUF4149 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI85_FISSO)

HSP 1 Score: 145 bits (367), Expect = 4.750e-38
Identity = 94/199 (47.24%), Postives = 120/199 (60.30%), Query Frame = 0
Query:  100 SRQASAKWMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPA----FVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPA-DAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELENRGEAKGAEYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLA 293
            S  +S +W +P +HN    R  AL++A+ LAA  S  S   ++PA     VH +SF    G+  YTTF+AGI MFKNLPRQTFGKLQ+KLFP YF L+S      L+TL  L +  G  A  +A  L  AL+  L N F LEP+ST  M+ RYELE++GE +   Y  L   FGK HGMSSL NL  L    A+A +L+
Sbjct:   32 SAVSSEEWTKPRLHNTATFRTIALLSAL-LAAGFSSKSPLKLLPAQVLGSVHTISFATWFGTVAYTTFVAGITMFKNLPRQTFGKLQAKLFPKYFALSSFTLALQLITLKSLKAMTGKAAHSSAKALGVALLMTLINQFFLEPKSTSNMMERYELEDKGEQESDRYKTLKANFGKFHGMSSLTNLIGLCAGVAHAVYLS 229          
BLAST of jgi.p|Trimin1|348497 vs. uniprot
Match: A0A7S2ULJ3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULJ3_9STRA)

HSP 1 Score: 146 bits (369), Expect = 5.690e-38
Identity = 98/207 (47.34%), Postives = 126/207 (60.87%), Query Frame = 0
Query:   90 VAGLSAWDPSSRQASAKWMQPAVHNANPVRVAALIAAVGLAARGS-LASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPADAA-VPLAAALVCNLGNLFVLEPRSTGVMLARYELENRGEAKGAE-YDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLA 293
            V  L  WDP++      W +P        R  A++AA+ LA  GS L+  SA   A VH+LSF    GS ++TTFI GI M+KNLPRQTFG+LQSKLFP YF   ++CA+ +L+ +  LS    V +  A + L  A V  L NLFVLEP+ST VM  RYELE+    K +E Y  L+  FGKLHGMSSL NL  L  A A+ +++A
Sbjct:   65 VPSLPKWDPTNWTPKTFWNKPLF------RAGAILAALALAGFGSPLSKISATAAATVHLLSFSTWFGSVIFTTFIGGITMYKNLPRQTFGRLQSKLFPKYF---NLCAITILLQILTLSKIPDVLSKRAEIALGTAFVTTLLNLFVLEPKSTKVMFKRYELEDMPGGKDSEGYKELASTFGKLHGMSSLSNLIGLCAAVAHGFYIA 262          
BLAST of jgi.p|Trimin1|348497 vs. uniprot
Match: A0A7S3L6U9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6U9_9STRA)

HSP 1 Score: 146 bits (368), Expect = 6.140e-38
Identity = 94/196 (47.96%), Postives = 118/196 (60.20%), Query Frame = 0
Query:   99 SSRQASAKWMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPADAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELENRGEAKGA-EYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLA 293
            +S + S +W +  +HN    R  AL+ A+ LA   S  +  A   A +H+LSF    GS  YTTF+AGI MFKNLPRQTFGKLQ+KLFP YF L S   L  L+TL  L  +  + +  A+ LA   V  L N F+LEP ST  M+ RYELE++   K   EY  L  +FGK HGMSSL NL AL G  A+A +LA
Sbjct:   58 ASAEESTEWTKKRLHNTAAFRSLALLGALALAGFSSPTALPAKASASLHLLSFATWFGSVAYTTFVAGITMFKNLPRQTFGKLQAKLFPKYFALGSFTLLLQLITLPSLPVTIKMASTKALSLA--FVMTLVNQFLLEPMSTSNMMRRYELEDQDGGKDTDEYKTLKASFGKFHGMSSLTNLIALCGGVAHAVYLA 251          
BLAST of jgi.p|Trimin1|348497 vs. uniprot
Match: A0A8J9RLF5_9CHLO (Probable transmembrane protein 205 at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RLF5_9CHLO)

HSP 1 Score: 144 bits (362), Expect = 7.780e-37
Identity = 89/196 (45.41%), Postives = 121/196 (61.73%), Query Frame = 0
Query:   99 SSRQASAKWMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPADAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELEN-RGEAKGAEYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLA 293
            +S + S   ++P+  N N VR+A + AA+ +AAR S          F+H+L++G+ +GS ++TTFIAGI MFKNLPRQTFGKLQ+KLFP YF +     +  L TL      GG+     + L  ALVC+L N   +EP +T +M  RY LEN +GE   A+  +L + FGK HG+SSLLNL ALG    + W LA
Sbjct:   76 ASEELSGPMLEPSAFNKNWVRLAWVSAALIVAAR-STEFLPVKAAGFIHLLAWGVWLGSNVWTTFIAGITMFKNLPRQTFGKLQAKLFPQYFAVAIAAGVLQLGTL-AFGVPGGIAQTQLITLGTALVCSLANWLYVEPVATNLMFERYNLENVQGEKDAAKIKQLYKQFGKFHGISSLLNLVALGAVVGHGWWLA 269          
BLAST of jgi.p|Trimin1|348497 vs. uniprot
Match: I0YK71_COCSC (DUF4149 domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YK71_COCSC)

HSP 1 Score: 141 bits (355), Expect = 3.050e-36
Identity = 86/198 (43.43%), Postives = 122/198 (61.62%), Query Frame = 0
Query:   97 DPSSRQASAKWMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPADAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELENR-GEAKGAEYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLA 293
            +PS  + S   ++P+  N N VR+A + AA+ +AAR S       +  F+H++++G+ +GS ++TTFIAGI MFKNLPRQTFGKLQ+KLFP YF +     +  + TL      GG+    ++ L  A V +L N   +EP +T +M  RY LEN  GE   A+  +L + FGK HG+SSLLNL ALG   ++ W LA
Sbjct:   36 NPSGEELSGPMLEPSAFNKNWVRLAWVSAALVVAAR-STEFLPVNVAVFIHLMAWGLWLGSNIWTTFIAGITMFKNLPRQTFGKLQAKLFPQYFAVAIAAGVLQIGTL-AFGVPGGIARTQSITLGVAFVTSLANWLYVEPVATNLMFERYNLENAPGEKDSAKIKQLYKQFGKFHGISSLLNLVALGAVISHGWWLA 231          
BLAST of jgi.p|Trimin1|348497 vs. uniprot
Match: A0A7S2I6I8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I6I8_9STRA)

HSP 1 Score: 142 bits (357), Expect = 6.660e-36
Identity = 95/210 (45.24%), Postives = 123/210 (58.57%), Query Frame = 0
Query:   88 KGVAGLSAWDPSSRQASAKWMQPAVHNANPVRVAALIAAVGLAARG---SLASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPADAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELENRGEAKGAE-YDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLA 293
            K V  L  WDP++      W    +HN    R +A++A +G+A+     S    SA   A +H+L+F    GS  YTTFI GI MFKNLPR+TFGKLQSKLFP YF L ++  L  ++TL+ L +   V   A V L  +LV  + NLF LEP ST +M  RY LE     K  + Y +L+  FGK HGMSSL NL AL GA A+ ++LA
Sbjct:   90 KVVPDLPDWDPTN------WTPKRLHNTAFFRFSAMLATIGVASYAIGSSPVKVSAKASATIHILAFATWFGSMAYTTFIGGITMFKNLPRKTFGKLQSKLFPIYFNLCAITILLQILTLNFLPTV--VTKKATVALGVSLVMTVLNLFYLEPTSTKIMFERYALEETSGGKDTDKYKKLAANFGKFHGMSSLTNLIALCGAIAHGFYLA 291          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348497 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZR0_9STRA6.040e-176100.00DUF4149 domain-containing protein n=1 Tax=Tribonem... [more]
D8LRR6_ECTSI2.130e-5049.76DUF4149 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A0G4F9E7_VITBC8.980e-4648.79DUF4149 domain-containing protein n=1 Tax=Vitrella... [more]
A0A7S3RBJ6_9SPIT6.410e-4551.08Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A1Z5KI85_FISSO4.750e-3847.24DUF4149 domain-containing protein n=2 Tax=Fistulif... [more]
A0A7S2ULJ3_9STRA5.690e-3847.34Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3L6U9_9STRA6.140e-3847.96Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A8J9RLF5_9CHLO7.780e-3745.41Probable transmembrane protein 205 at C-terminar h... [more]
I0YK71_COCSC3.050e-3643.43DUF4149 domain-containing protein n=1 Tax=Coccomyx... [more]
A0A7S2I6I8_9STRA6.660e-3645.24Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000104Antifreeze protein, type IPRINTSPR00308ANTIFREEZEIcoord: 333..342
score: 68.75
coord: 317..328
score: 58.33
coord: 303..317
score: 72.5
IPR025423Domain of unknown function DUF4149PFAMPF13664DUF4149coord: 149..247
e-value: 1.0E-24
score: 86.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..84
NoneNo IPR availablePANTHERPTHR23241LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATEDcoord: 41..293

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_25contigContig_25:588380..592496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348497mRNA_6669Tribonema minus UTEX_B_3156 mRNAContig_25 588189..592512 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348497|estExt_Genemark1.C_Ctg_250077 ID=Trimin1|348497|estExt_Genemark1.C_Ctg_250077|Name=jgi.p|Trimin1|348497|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=373bp
MKPLAAFALLLVADVPSLAFVVRTPVGESLKQQHIATAFPANRSSTATTV
LASTQNAEDAAAAAPAAPPATAAPPATTAAAAPPSGPKGVAGLSAWDPSS
RQASAKWMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPAFVHVLS
FGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAM
LVTLHGLSSSGGVPADAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELE
NRGEAKGAEYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLARVRDAAA
AAAAAVAAAAAAATAAIAAAAAAAAAAAAAAAEAAASAAAAAAAGVAEAV
AAAAAAAAAAAQPMPQSFLTQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000104Antifreeze_1
IPR025423DUF4149