Trimin1|348472|estExt_Genemark1.C_Ctg_250030 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|348472
Unique Name	Trimin1\|348472\|estExt_Genemark1.C_Ctg_250030
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	904

Homology

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BLAST of jgi.p|Trimin1|348472 vs. uniprot
Match: A0A835Z2B5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B5_9STRA)

HSP 1 Score: 984 bits (2543), Expect = 0.000e+0
Identity = 903/903 (100.00%), Postives = 903/903 (100.00%), Query Frame = 0

Query:    1 MQISARAELDGRGGEPALATATGGALRAAKLAKGSGVGSTRAARTAXXXXXXXXXXXXXXXSASERHSVTEKAAALLLRAPAFTDTVSAERGGLSRGDSAGADDHASGADDYASSSAGEQSPPXXXQPVRAARVTRSGTRRAPQATATRRSSGGARGAPAVAAQRVTSTGGLRLRPGAVSARYGSGGDSDAEGAPASVTEAAAAVLARAPVFSTGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGXXXXXXXXXXXXPAAFTRXXXXXXXRGAASAXXXXXXGSGALRAQAGGAHAGIRADAAVRTRGRPMSKTEAAAALLLRAPQLSAAVAADAPSPDADAADYASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARPASARVATGGVTPDRHAXXXXXXXXXXXXXTDDASDSYASDSSTFDAQAXXXXXXXXXXGAPGLAARXXXXXXXXRGRGARGGARGGRGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGVAAVPRRPAXXXXXXXXXXXXXXXXNGSSLSDAESRKHGALLSGQPRDKASLQASASDARGAGGAARGKXXXRRGGRGSTVTGGRGSAEGAEPPVRGGPGGAKAPAARPGARGNGVAPAEPVEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPSPELPRRARGPDDPTTAEALAEISRLDLESELLRASRDELHRALNAMLAEQRRRGWLPPGDAPQLVPPPPPLPRAAPHASIFGVQQLXXXXXXXXXXXXXXXXXVQPGAHGLEQQLARIHMDGGARMPALGAELLPQPPSAAAPSQLQLPLLPVLPPLGQXXXXXXXXXXXXXXXXXXXXXXAHGAARVGDGGLADMLLDSDDD 903
            MQISARAELDGRGGEPALATATGGALRAAKLAKGSGVGSTRAARTAXXXXXXXXXXXXXXXSASERHSVTEKAAALLLRAPAFTDTVSAERGGLSRGDSAGADDHASGADDYASSSAGEQSPPXXXQPVRAARVTRSGTRRAPQATATRRSSGGARGAPAVAAQRVTSTGGLRLRPGAVSARYGSGGDSDAEGAPASVTEAAAAVLARAPVFSTGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGXXXXXXXXXXXXPAAFTRXXXXXXXRGAASAXXXXXXGSGALRAQAGGAHAGIRADAAVRTRGRPMSKTEAAAALLLRAPQLSAAVAADAPSPDADAADYASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARPASARVATGGVTPDRHAXXXXXXXXXXXXXTDDASDSYASDSSTFDAQAXXXXXXXXXXGAPGLAARXXXXXXXXRGRGARGGARGGRGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGVAAVPRRPAXXXXXXXXXXXXXXXXNGSSLSDAESRKHGALLSGQPRDKASLQASASDARGAGGAARGKXXXRRGGRGSTVTGGRGSAEGAEPPVRGGPGGAKAPAARPGARGNGVAPAEPVEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPSPELPRRARGPDDPTTAEALAEISRLDLESELLRASRDELHRALNAMLAEQRRRGWLPPGDAPQLVPPPPPLPRAAPHASIFGVQQLXXXXXXXXXXXXXXXXXVQPGAHGLEQQLARIHMDGGARMPALGAELLPQPPSAAAPSQLQLPLLPVLPPLGQXXXXXXXXXXXXXXXXXXXXXXAHGAARVGDGGLADMLLDSDDD
Sbjct:    1 MQISARAELDGRGGEPALATATGGALRAAKLAKGSGVGSTRAARTAXXXXXXXXXXXXXXXSASERHSVTEKAAALLLRAPAFTDTVSAERGGLSRGDSAGADDHASGADDYASSSAGEQSPPXXXQPVRAARVTRSGTRRAPQATATRRSSGGARGAPAVAAQRVTSTGGLRLRPGAVSARYGSGGDSDAEGAPASVTEAAAAVLARAPVFSTGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGXXXXXXXXXXXXPAAFTRXXXXXXXRGAASAXXXXXXGSGALRAQAGGAHAGIRADAAVRTRGRPMSKTEAAAALLLRAPQLSAAVAADAPSPDADAADYASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARPASARVATGGVTPDRHAXXXXXXXXXXXXXTDDASDSYASDSSTFDAQAXXXXXXXXXXGAPGLAARXXXXXXXXRGRGARGGARGGRGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGVAAVPRRPAXXXXXXXXXXXXXXXXNGSSLSDAESRKHGALLSGQPRDKASLQASASDARGAGGAARGKXXXRRGGRGSTVTGGRGSAEGAEPPVRGGPGGAKAPAARPGARGNGVAPAEPVEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPSPELPRRARGPDDPTTAEALAEISRLDLESELLRASRDELHRALNAMLAEQRRRGWLPPGDAPQLVPPPPPLPRAAPHASIFGVQQLXXXXXXXXXXXXXXXXXVQPGAHGLEQQLARIHMDGGARMPALGAELLPQPPSAAAPSQLQLPLLPVLPPLGQXXXXXXXXXXXXXXXXXXXXXXAHGAARVGDGGLADMLLDSDDD 903

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348472 vs. uniprot

BLAST of jgi.p|Trimin1|348472 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z2B5_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 790..804
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 410..433
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 688..703
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..303
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 747..903
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 760..775
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 332..722

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_25	contig	Contig_25:317750..321067 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348472	mRNA_6629	Tribonema minus UTEX_B_3156	mRNA	Contig_25 317750..321067 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|348472|estExt_Genemark1.C_Ctg_250030 ID=Trimin1|348472|estExt_Genemark1.C_Ctg_250030|Name=jgi.p|Trimin1|348472|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=904bp
MQISARAELDGRGGEPALATATGGALRAAKLAKGSGVGSTRAARTAAARR
AAGSGAPSSGGSASERHSVTEKAAALLLRAPAFTDTVSAERGGLSRGDSA
GADDHASGADDYASSSAGEQSPPPPPQPVRAARVTRSGTRRAPQATATRR
SSGGARGAPAVAAQRVTSTGGLRLRPGAVSARYGSGGDSDAEGAPASVTE
AAAAVLARAPVFSTGGSDAAARAAALDGGAVAHEYASSSSGGEDTRQRAG
TARAAGGGTRRAPAAFTRSGSGGGRRGAASAAGRRAAGSGALRAQAGGAH
AGIRADAAVRTRGRPMSKTEAAAALLLRAPQLSAAVAADAPSPDADAADY
ASSSSGGDGAAVPQRRAASTLGGGGGGARRLRSSARPASARVATGGVTPD
RHAASAAAAALSSSEDTDDASDSYASDSSTFDAQAGAAAAAAAARGAPGL
AARGRGSRGRGRGRGARGGARGGRGASAAAGKGRAGRGGASPAQRGGGKR
PATPGGSEDGVAAVPRRPARRSAETGGGGAARGGGNGSSLSDAESRKHGA
LLSGQPRDKASLQASASDARGAGGAARGKGGGRRGGRGSTVTGGRGSAEG
AEPPVRGGPGGAKAPAARPGARGNGVAPAEPVEAAAAAAAAAGDGQLLRS
SHAARRAARRRPAAATASSATAAAAAAAAAEAAAAVAEAAPPPPPPRPPS
PELPRRARGPDDPTTAEALAEISRLDLESELLRASRDELHRALNAMLAEQ
RRRGWLPPGDAPQLVPPPPPLPRAAPHASIFGVQQLPPRAPQQQVPPPPQ
APLVQPGAHGLEQQLARIHMDGGARMPALGAELLPQPPSAAAPSQLQLPL
LPVLPPLGQQQQQQHPPFEQPGAAAAAAGGAAHGAARVGDGGLADMLLDS
DDD*