Trimin1|348449|estExt_Genemark1.C_Ctg_240098 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348449
Unique NameTrimin1|348449|estExt_Genemark1.C_Ctg_240098
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length588
Homology
BLAST of jgi.p|Trimin1|348449 vs. uniprot
Match: A0A836CGS2_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGS2_9STRA)

HSP 1 Score: 906 bits (2341), Expect = 0.000e+0
Identity = 586/587 (99.83%), Postives = 586/587 (99.83%), Query Frame = 0
Query:    1 MKIVGGTLEGFLYGFDHPDDEATAPDTLSMAYGYKVHAGCVKSLAIAEKGTLAGKMLVTGGTDERIRIYDLGQRTEKGELQQHSGTVTCLAFHDSTHLLSGSEDKTICIWRVHDWALLHVLGGHKGAVTDLSIHPSGRMALSVSTDRTLRLWNLVEGRAAYIKRLPGGGDMVRWSPQGTHFAVVVGKQLILYEAAASEPACTRSCPLKINAMAWLNDTTVAAAADDHVIRVYSATGDVLAELPAEAACGGRVRDMAYTPTLTLALGLGDSGGAAAHDPEETAAAEVAVGASALGTEQRGRLVTVTSTGTVQVWELKLDGGSCSATVVAHTRVLGEPRFTCLVACDTASAXXXXXXXXXXXXXXXXXXXXXXXXVLSENDSAQPTDSVGRQDADQGERHKKKXXXXXGTPSKPEGRGAAEPSPQGEAGGARSAGKGKSGPQKPPSRSHKXXXXXXXXLAHEGTRASGKKQARAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVGTPKKQQVGFSEVTPGGKSPVKAKVKXXXXXXXXXXXXXQKHKQTLDQAAKSRAKQRK 587
            MKIVGGTLEGFLYGFDHPDDEATAPDTLSMAYGYKVHAGCVKSLAIAEKGTLAGKMLVTGGTDERIRIYDLGQRTEKGELQQHSGTVTCLAFHDSTHLLSGSEDKTICIWRVHDWALLHVLGGHKGAVTDLSIHPSGRMALSVSTDRTLRLWNLVEGRAAYIKRLPGGGDMVRWSPQGTHFAVVVGKQLILYEAAASEPACTRSCPLKINAMAWLNDTTVAAAADDHVIRVYSATGDVLAELPAEAACGGRVRDMAYTPTLTLALGLGDSGGAAAHDPEETAAAEVAVGASALGTEQRGRLVTVTSTGTVQVWELKLDGGSCSATVVAHTRVLGEPRFTCLVACDTASAXXXXXXXXXXXXXXXXXXXXXXXXVLSENDSAQPTDSVGRQDADQGERHKKKXXXXXGTPSKPEGRGAAEPSPQGEAGGARSAGKGKSGPQKPPSRSHKXXXXXXXXLAHEGTRASGKKQARAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVGTPKKQQVGFSEVTPGGKSPVKAKVK XXXXXXXXXXXXQKHKQTLDQAAKSRAKQRK
Sbjct:    1 MKIVGGTLEGFLYGFDHPDDEATAPDTLSMAYGYKVHAGCVKSLAIAEKGTLAGKMLVTGGTDERIRIYDLGQRTEKGELQQHSGTVTCLAFHDSTHLLSGSEDKTICIWRVHDWALLHVLGGHKGAVTDLSIHPSGRMALSVSTDRTLRLWNLVEGRAAYIKRLPGGGDMVRWSPQGTHFAVVVGKQLILYEAAASEPACTRSCPLKINAMAWLNDTTVAAAADDHVIRVYSATGDVLAELPAEAACGGRVRDMAYTPTLTLALGLGDSGGAAAHDPEETAAAEVAVGASALGTEQRGRLVTVTSTGTVQVWELKLDGGSCSATVVAHTRVLGEPRFTCLVACDTASAXXXXXXXXXXXXXXXXXXXXXXXXVLSENDSAQPTDSVGRQDADQGERHKKKXXXXXGTPSKPEGRGAAEPSPQGEAGGARSAGKGKSGPQKPPSRSHKXXXXXXXXLAHEGTRASGKKQARAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVGTPKKQQVGFSEVTPGGKSPVKAKVKLXXXXXXXXXXXXQKHKQTLDQAAKSRAKQRK 587          
BLAST of jgi.p|Trimin1|348449 vs. uniprot
Match: D7G200_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G200_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 1.890e-92
Identity = 175/397 (44.08%), Postives = 219/397 (55.16%), Query Frame = 0
Query:    1 MKIVGGTLEGFLYGFDHPDDEATA-------------------------------------PDTLSMAYGYKVHAGCVKSLAIAEKGTLAGKMLVTGGTDERIRIYDLGQRTEKGELQQHSGTVTCLAFHDSTHLLSGSEDKTICIWRVHDWALLHVLGGHKGAVTDLSIHPSGRMALSVSTDRTLRLWNLVEGRAAYIKRLPGGGDMVRWSPQGTHFAVVVGKQLILYEAAASEPACTRSCPLKINAMAWLND------TTVAAAADDHVIRVYSATGD-VLAELPAEAACG-GRVRDMAYTPTLTLALGLGDSGGAAAHDPEETAAAEVAVGASALGTEQRGRLVTVTSTGTVQVWELKL--------DGGSCSATVVAHTRVLGEPRFTCLVAC 344
            M+IV GT EGF YG++  + E+ A                                     P  LS+ +GY VH GC+KS+AIA  G+ AG++LVTGG DER+RIYDL  RTE GELQQH+GT+TC+ F+ STHLL+GSED T+CIWRVHDWALLHVLGGHK AVT LSIHPSGRMALSVS DRTLRLWNL+EGR AYIKRL G G++V+WSP G  + VVVG  + +Y AA SE         ++N+  +           VA  ADD  IR +   G  +L ++     C  GR+RDM +             G  A          + A           G L TVTSTG V VW +           G   +  +++   + GEPRFTC+ AC
Sbjct:    1 MRIVAGTYEGFCYGWESNNTESAAVGAESLSGTTTTDTKGVKNXXXXXXXXXXXXXXXXTPPQPLSLVFGYNVHVGCMKSVAIATSGSRAGQLLVTGGADERVRIYDLRDRTELGELQQHNGTITCMEFYKSTHLLTGSEDHTVCIWRVHDWALLHVLGGHKAAVTSLSIHPSGRMALSVSRDRTLRLWNLLEGRCAYIKRLQGEGELVKWSPAGDSYLVVVGSTVSVYSAATSEAVGECRHDARVNSACFTGGKGGKGAVAVATCADDKTIRFFRTEGGTLLGKVDVSDVCPTGRIRDMCHV------------GADAXXXXXXXXXXDRACSGG-------GSLATVTSTGGVHVWGVPTLEGVGAEGSGAELTVPLLSTHSLKGEPRFTCVTAC 378          
BLAST of jgi.p|Trimin1|348449 vs. uniprot
Match: A0A7R9U2R5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2R5_9STRA)

HSP 1 Score: 234 bits (597), Expect = 4.860e-68
Identity = 117/263 (44.49%), Postives = 166/263 (63.12%), Query Frame = 0
Query:    3 IVGGTLEGFLYGFDHPDDEAT-----APDT---LSMAYGYKVHAGCVKSLAIAEKGTLAGKMLVTGGTDERIRIYDLGQRTEKGELQQHSGTVTCLAFHDSTHLLSGSEDKTICIWRVHDWALLHVLGGHKGAVTDLSIHPSGRMALSVSTDRTLRLWNLVEGRAAYIKRLPGGGDMVRWSPQGTHFAVVVGKQLILYEAAASEPACTRSCPLKINAMAWLNDT-TVAAAADDHVIRVYSAT-GDVLAELPAEAACGGRVRDM 255
            +V GT  G L G      E +     APD    L +++ Y+ H GC+KSLA+       G +LV+GGTDERIRIYDL  + E GELQQH+G VTCLAF  STHLLSGS D TICIWRVHDW  L +LG H G V DL++HPSGR+ALSV+ DRT+RLW+L++GR A+ +R+ G  + V+W  +G+ +A+++G+ + ++ AA +   C      + NA  +L    T+  A DD ++R +  + G ++ +L        R+RD+
Sbjct:    7 VVAGTYYGDLIGLSTEKPEGSEAKESAPDQPSPLQLSFAYRAHIGCIKSLALCTTQKRGGALLVSGGTDERIRIYDLALKAEVGELQQHNGAVTCLAFVGSTHLLSGSTDSTICIWRVHDWNCLQILGDHSGEVLDLAVHPSGRVALSVAKDRTIRLWDLIKGRCAFTRRVRGIAEQVQWDEEGSMYAILIGRDVQVHNAADNSVVCKLEHEKRTNAFKFLPGIGTILTAGDDRLLRFFRVSDGSLVRQLDLSTVFPFRIRDL 269          
BLAST of jgi.p|Trimin1|348449 vs. uniprot
Match: A0A7R9Y9Y4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9Y4_9STRA)

HSP 1 Score: 231 bits (588), Expect = 5.890e-68
Identity = 112/239 (46.86%), Postives = 155/239 (64.85%), Query Frame = 0
Query:    3 IVGGTLEGFLYGFDHPDDEAT-----APDT---LSMAYGYKVHAGCVKSLAIAEKGTLAGKMLVTGGTDERIRIYDLGQRTEKGELQQHSGTVTCLAFHDSTHLLSGSEDKTICIWRVHDWALLHVLGGHKGAVTDLSIHPSGRMALSVSTDRTLRLWNLVEGRAAYIKRLPGGGDMVRWSPQGTHFAVVVGKQLILYEAAASEPACTRSCPLKINAMAWLNDT-TVAAAADDHVIRVY 232
            +V GT  G L G      E +     APD    L +++ Y+ H GC+KSLA+       G +LV+GGTDERIRIYDL  + E GELQQH+G VTCLAF  STHLLSGS D TICIWRVHDW  L +LG H G V DL++HPSGR+ALSV+ DRT+RLW+L++GR A+ +R+ G  + V+W  +G+ +A+++G+ + ++ AA +   C      + NA  +L    T+  A DD ++R +
Sbjct:    7 VVAGTYYGDLIGLSTEKPEGSEAKESAPDQPSPLQLSFAYRAHIGCIKSLALCTTQKRGGALLVSGGTDERIRIYDLALKAEVGELQQHNGAVTCLAFVGSTHLLSGSTDSTICIWRVHDWNCLQILGDHSGEVLDLAVHPSGRVALSVAKDRTIRLWDLIKGRCAFTRRVRGIAEQVQWDEEGSMYAILIGRDVQVHNAADNSVVCKLEHEKRTNAFKFLPGIGTILTAGDDRLLRFF 245          
BLAST of jgi.p|Trimin1|348449 vs. uniprot
Match: A0A8K1FGB7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGB7_PYTOL)

HSP 1 Score: 227 bits (578), Expect = 7.210e-65
Identity = 130/356 (36.52%), Postives = 191/356 (53.65%), Query Frame = 0
Query:    1 MKIVGGTLEGFLYGFDHPDDEATAPDTLSMAYGYKVHAGCVKSLAIAEKGTLAGKMLVTGGTDERIRIYDLGQRTEKGELQQHSGTVTCLAFHDSTHLLSGSEDKTICIWRVHDWALLHVLGGHKGAVTDLSIHPSGRMALSVSTDRTLRLWNLVEGRAAYIKRLPGGGDMVRWSPQGTHFAVVVGKQLILYEAAASEPACTRSCPLKINAMAWLNDTTVAAAADDHVIRVYSATGDVLAELPAEAACGGRVRDMAYTPTLTLALGLGDSGGAAAHDPEETAAAEVAVGASALGTEQRGRLVTVTSTGTVQVWEL--------KLDGGSCSATVVAHTRVLGEPRFTCLVACDTAS 348
            ++IV GT EG LYG++ P   A  P  + + +GY  HA C+KS+++       GK L++GG DE I+IY++ +R E G L +H G VTCL F   +H+LSGS D +ICIWR  DW  LH+LGGHK  +T +++HPSG++A SV+ DRTLR+WNLV+GR AYI+RL      V  S  G+ +A+  G  + ++ +A +E         K++A  +  D  V    +D  I V+ ATG ++A++   A    R+R M                             EV     A G E+   +V  +S+G VQVW+L          +  +   T +  T +L +PR TCL AC  +S
Sbjct:    2 IRIVAGTYEGLLYGWELPVT-AKKPTKMKLTFGYSAHAECIKSVSLMT--AKEGKTLISGGNDEMIKIYNVNKRVEVGTLMEHKGAVTCLEFFGQSHMLSGSADNSICIWRTSDWNCLHILGGHKAEITSMAVHPSGKLAFSVARDRTLRMWNLVKGRIAYIRRLEKEASSVVMSQSGSRYALSFGSDVSVFSSANAEVVGMLEHSDKVHAAVFATDEYVVCGGEDKCIYVWKATGSLVAKVT-HADIISRIRCM-----------------------------EVVY---ARGAEELPWIVVASSSGAVQVWDLADFTFDDESPEEANKDVTPLVSTTLLSKPRVTCLSACVASS 321          
BLAST of jgi.p|Trimin1|348449 vs. uniprot
Match: A0A5D6YCQ0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCQ0_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.550e-63
Identity = 130/358 (36.31%), Postives = 189/358 (52.79%), Query Frame = 0
Query:    1 MKIVGGTLEGFLYGFDHPDDEATAPDT------LSMAYGYKVHAGCVKSLAIAEKGTLAGKMLVTGGTDERIRIYDLGQRTEKGELQQHSGTVTCLAFHDSTHLLSGSEDKTICIWRVHDWALLHVLGGHKGAVTDLSIHPSGRMALSVSTDRTLRLWNLVEGRAAYIKRLPGGGDMVRWSPQGTHFAVVVGKQLILYEAAASEPACTRSCPLKINAMAWLNDTTVAAAADDHVIRVYSATGDVLAELPAEAACGGRVRDMAYTPTLTLALGLGDSGGAAAHDPEETAAAEVAVGASALGTEQRGRLVTVTSTGTVQVWELK------LDGGSCSATV--VAHTRVLGEPRFTCLVAC 344
            ++IV GT EG LYG++ P D   APD       L + +GY  H  C+KS+A+       GK L++GG DE I+IY++ +R E G L +  G +T L F   +HLLSGS D +ICIWR  DW  LH+LGGHKG +  +++HPSG++  SV+ DRTLR+WNLV+GR AYI+RL    ++V  S +G+ +A+  G  L ++ +A +E         ++   A+  D  V  A DD  I V+ ATG+++A++   A    R+R +                                      G +    +V  TS GTVQ+W+L       L   + +A V  V  T +L +PR TCL AC
Sbjct:    2 LRIVAGTYEGLLYGWEFPTDALGAPDAKSPSPKLKLIFGYSAHTECIKSVALM--AAKHGKTLLSGGNDELIKIYNVDKRVEVGSLMEQHGAITSLEFFGQSHLLSGSADHSICIWRTSDWNCLHILGGHKGEINSIAVHPSGKLCFSVARDRTLRMWNLVKGRIAYIRRLEKEANLVLLSQKGSRYALCFGADLSVFSSANAELVGALEHKQRVQCAAFATDDYVVCAGDDKHIYVWQATGNLVAKVT-HADITARIRCLQVLYVN--------------------------------GEDALPWVVLATSNGTVQIWDLAAFTFDALAPAAANAGVAPVTSTTLLSKPRLTCLSAC 324          
BLAST of jgi.p|Trimin1|348449 vs. uniprot
Match: K3X853_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X853_GLOUD)

HSP 1 Score: 222 bits (566), Expect = 4.650e-63
Identity = 129/355 (36.34%), Postives = 185/355 (52.11%), Query Frame = 0
Query:    1 MKIVGGTLEGFLYGFDHPDD---EATAPDTLSMAYGYKVHAGCVKSLAIAEKGTLAGKMLVTGGTDERIRIYDLGQRTEKGELQQHSGTVTCLAFHDSTHLLSGSEDKTICIWRVHDWALLHVLGGHKGAVTDLSIHPSGRMALSVSTDRTLRLWNLVEGRAAYIKRLPGGGDMVRWSPQGTHFAVVVGKQLILYEAAASEPACTRSCPLKINAMAWLNDTTVAAAADDHVIRVYSATGDVLAELPAEAACGGRVRDMAYTPTLTLALGLGDSGGAAAHDPEETAAAEVAVGASALGTEQRGRLVTVTSTGTVQVWEL---KLDG-----GSCSATVVAHTRVLGEPRFTCLVAC 344
            ++IV GT EG LYG++ P     +A +P  L + +GY  H  C+KS+A+       GK L++GG DE I+IY++ +R E G L +  G +T L F   +HLLSGS D +ICIWR  DW  LH+LGGHKG +  +++HPSG++  SV+ DRTLR+WNLV+GR AYI+RL    ++V  S +GT +A+  G  L ++ +A +E   T     +I    +  D  V    DD  I V+  +G ++A++                                   PE TA           G +Q   +V  TS G VQ+W+L   K D       + S   VA T +L +PR TCL AC
Sbjct:    2 LRIVAGTYEGLLYGWEFPTKASLKAPSPK-LKLIFGYSAHTECIKSVALM--AAKHGKTLLSGGNDEMIKIYNVDKRVEVGSLMEQHGAITSLEFFGQSHLLSGSADNSICIWRTSDWNCLHILGGHKGEINSIAVHPSGKLCFSVARDRTLRMWNLVKGRIAYIRRLEREANLVMLSQKGTRYALCFGTDLSVFSSANAELVGTLEHKQRIQCAVFATDDYVVCGGDDKYIYVWKTSGSLVAKVT---------------------------------HPEITARIRCMQVLYVNGEDQLPWIVIATSNGAVQIWDLATLKFDALAPEESNKSVVPVASTLLLSKPRLTCLTAC 320          
BLAST of jgi.p|Trimin1|348449 vs. uniprot
Match: A0A024US37_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024US37_9STRA)

HSP 1 Score: 222 bits (566), Expect = 6.230e-63
Identity = 107/245 (43.67%), Postives = 157/245 (64.08%), Query Frame = 0
Query:    1 MKIVGGTLEGFLYGFDHPDDEATA--PDT-LSMAYGYKVHAGCVKSLAIAEKGTLAGKMLVTGGTDERIRIYDLGQRTEKGELQQHSGTVTCLAFHDSTHLLSGSEDKTICIWRVHDWALLHVLGGHKGAVTDLSIHPSGRMALSVSTDRTLRLWNLVEGRAAYIKRLPGGGDMVRWSPQGTHFAVVVGKQLILYEAAASEPACTRSCPLKINAMAWLNDTTVAAAADDHVIRVYSATGDVLAEL 242
            ++IV GT EG LYG++    + T   P T L M YGY  H  C+K+LA+  +    GK L+TGG DE I+IY++ ++ E G L QH G +TCL ++  +H+LSGS D TICIWR  DW  +H+LGGHKGA+  +++HPSG++A SVS D+TLR+WNLV+GR+AYI+RL      V  SP G  + +V+GK + ++ +A +E         K++  A+  +  VA   DD +  +Y A G +LA++
Sbjct:    6 LQIVAGTYEGMLYGWEASTKDLTGKKPRTALKMIYGYPAHTECIKALAMMMEHD--GKTLLTGGNDEMIKIYNVKKKVEVGILMQHKGAITCLEYYGKSHVLSGSADNTICIWRTSDWNCIHILGGHKGAINSIAVHPSGKLAFSVSRDKTLRMWNLVKGRSAYIRRLDQEATCVFLSPDGNRYGLVMGKDVSIFGSANAELVGALEHKKKVHTAAFATNDLVALGTDDGIFYLYRAQGQLLAKI 248          
BLAST of jgi.p|Trimin1|348449 vs. uniprot
Match: A0A024GIW4_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GIW4_9STRA)

HSP 1 Score: 221 bits (563), Expect = 1.000e-62
Identity = 130/357 (36.41%), Postives = 191/357 (53.50%), Query Frame = 0
Query:    1 MKIVGGTLEGFLYGFDH-PDDEATAPD----TLSMAYGYKVHAGCVKSLAIAEKGTLAGKMLVTGGTDERIRIYDLGQRTEKGELQQHSGTVTCLAFHDSTHLLSGSEDKTICIWRVHDWALLHVLGGHKGAVTDLSIHPSGRMALSVSTDRTLRLWNLVEGRAAYIKRLPGGGDMVRWSPQGTHFAVVVGKQLILYEAAASEPACTRSCPLKINAMAWLNDTTVAAAADDHVIRVYSATGDVLAELPAEAACGGRVRDMAYTPTLTLALGLGDSGGAAAHDPEETAAAEVAVGASALGTEQRGRLVTVTSTGTVQVWEL---KLDGGSC-----SATVVAHTRVLGEPRFTCLVAC 344
            ++I  GT +G LYG+D  P  E    D    TL + +GY  H+ CVKS    +     GK+L++G +DE I+IYD+ +R E G L + SG++TCL F   TH+LS S DKT+CIWRV DW  LH+LGGHK  +  ++IHPSG++A SV+ D+TLR+WNLV GR AYI+RL    ++V+ S  G  + +  G  + ++  + +E   T   P +++A  +  D  V  A +D  + V++  G +LA++                P LT  +   D       D E ++   +              +V  TS GTVQ+W+L   +LD  S      S    A T++L  PR TCL AC
Sbjct:    2 LRIAAGTYDGILYGWDAIPMAEEKHSDATKWTLKLRFGYSAHSECVKSAVFMKSRN--GKILLSGSSDETIKIYDVDKRVEVGTLMEQSGSITCLEFFQQTHVLSASTDKTVCIWRVSDWNCLHILGGHKEEINSITIHPSGKLAFSVARDQTLRMWNLVNGRCAYIRRLEKEAEIVKISTLGKRYLLTFGSVVSIFSTSDAELVGTLKHPKRVHACVFATDDLVVCAGEDKHLYVWNVDGTLLAKVT--------------HPDLTARIRCID-----VIDQEVSSDLPI--------------IVLATSNGTVQIWDLNDLQLDSDSPFELNESVQPSATTKILNAPRITCLTAC 323          
BLAST of jgi.p|Trimin1|348449 vs. uniprot
Match: A0A067BPR0_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BPR0_SAPPC)

HSP 1 Score: 221 bits (563), Expect = 1.450e-62
Identity = 131/358 (36.59%), Postives = 189/358 (52.79%), Query Frame = 0
Query:    1 MKIVGGTLEGFLYGFDHPDDEATAPDT-LSMAYGYKVHAGCVKSLAIAEKGTLAGKMLVTGGTDERIRIYDLGQRTEKGELQQHSGTVTCLAFHDSTHLLSGSEDKTICIWRVHDWALLHVLGGHKGAVTDLSIHPSGRMALSVSTDRTLRLWNLVEGRAAYIKRLPGGGDMVRWSPQGTHFAVVVGKQLILYEAAASEPACTRSCPLKINAMAWLNDTTVAAAADDHVIRVYSATGDVLAELPAEAACGGRVRDMAYTPTLTLALGLGDSGGAAAHDPEETAAAEVAVGASALGTEQRGRLVTVTSTGTVQVWELK---LDGGSCSAT-----VVAHTRVLGEPRFTCLVACDTASA 349
            +++V GT EG LYG++   D+  A    L M YGY  H  C+KS+A+  +    GK L+TG TDE I+IY++ ++ E G L QH G VTCL ++  +H+LSGS D TICIWR  DW  +H+LGGHK  V  +++HPSG++A SV+ D+TLR+WNLV+GR+AYI+RL      V  S  G  + +V+G+ + L+ AA ++         K+N  A+     V    DD    ++ A+G V+AE+   A+   R+R M                      P+E+A   +               V  TS G VQVW+L    L+G    A       V  T++ G    T L AC T+ A
Sbjct:    6 LQVVAGTYEGMLYGWEASMDDLLAKKAKLKMIYGYPAHTECIKSIAMMMEHD--GKTLLTGSTDEMIKIYNVKRKVEVGILMQHKGAVTCLEYYGKSHVLSGSADNTICIWRTSDWNCVHILGGHKAPVNSIAVHPSGKLAFSVARDKTLRMWNLVKGRSAYIRRLDQEASEVFLSHDGNRYGLVMGRDVSLFGAANADLLAVLEHKKKVNTAAFATSDLVVCGLDDGSFYIHRASGGVVAEVK-HASLDARIRCMQIVAK-----------------PDESALPFI---------------VLATSKGVVQVWDLADFTLNGDDTVAANADVQPVVSTKMYGSALVTALSACKTSHA 328          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348449 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CGS2_9STRA0.000e+099.83WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
D7G200_ECTSI1.890e-9244.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7R9U2R5_9STRA4.860e-6844.49Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9Y9Y4_9STRA5.890e-6846.86Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A8K1FGB7_PYTOL7.210e-6536.52Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6YCQ0_9STRA1.550e-6336.31Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3X853_GLOUD4.650e-6336.34Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A024US37_9STRA6.230e-6343.67Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A024GIW4_9STRA1.000e-6236.41Uncharacterized protein n=2 Tax=Albugo candida Tax... [more]
A0A067BPR0_SAPPC1.450e-6236.59Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 27..70
e-value: 1.8
score: 15.3
coord: 198..233
e-value: 1.8
score: 15.4
coord: 235..314
e-value: 290.0
score: 1.4
coord: 114..153
e-value: 6.1E-9
score: 45.7
coord: 73..111
e-value: 3.2E-8
score: 43.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 116..153
e-value: 5.9E-7
score: 30.1
coord: 78..110
e-value: 3.8E-6
score: 27.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 121..162
score: 14.652308
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 80..120
score: 11.778342
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..163
e-value: 1.8E-35
score: 124.9
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 164..382
e-value: 3.1E-10
score: 41.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 569..587
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 469..500
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..460
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 376..587
NoneNo IPR availablePANTHERPTHR44675PAK1 INTERACTING PROTEIN 1coord: 1..402
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 80..112
score: 9.783781
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 121..154
score: 11.65559
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 140..154
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 34..340

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_24contigContig_24:958210..966845 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348449mRNA_7549Tribonema minus UTEX_B_3156 mRNAContig_24 958210..966902 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348449|estExt_Genemark1.C_Ctg_240098 ID=Trimin1|348449|estExt_Genemark1.C_Ctg_240098|Name=jgi.p|Trimin1|348449|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=588bp
MKIVGGTLEGFLYGFDHPDDEATAPDTLSMAYGYKVHAGCVKSLAIAEKG
TLAGKMLVTGGTDERIRIYDLGQRTEKGELQQHSGTVTCLAFHDSTHLLS
GSEDKTICIWRVHDWALLHVLGGHKGAVTDLSIHPSGRMALSVSTDRTLR
LWNLVEGRAAYIKRLPGGGDMVRWSPQGTHFAVVVGKQLILYEAAASEPA
CTRSCPLKINAMAWLNDTTVAAAADDHVIRVYSATGDVLAELPAEAACGG
RVRDMAYTPTLTLALGLGDSGGAAAHDPEETAAAEVAVGASALGTEQRGR
LVTVTSTGTVQVWELKLDGGSCSATVVAHTRVLGEPRFTCLVACDTASAA
AAAASKKGKKRKRALSSTAAAAAVLSENDSAQPTDSVGRQDADQGERHKK
KKKGKKGTPSKPEGRGAAEPSPQGEAGGARSAGKGKSGPQKPPSRSHKQQ
QQQQQELAHEGTRASGKKQARAAKQTPQKKNSPAQPPSQQQQQKQRSAEK
APVASSKKAKKAAKTAVSQPAAAAAASAVGTPKKQQVGFSEVTPGGKSPV
KAKVKLAKGTPAPKAAMKQKHKQTLDQAAKSRAKQRK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf