Trimin1|348378|estExt_Genemark1.C_Ctg_230073 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348378
Unique NameTrimin1|348378|estExt_Genemark1.C_Ctg_230073
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length817
Homology
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BLAST of jgi.p|Trimin1|348378 vs. uniprot
Match: A0A835Z2B3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B3_9STRA)

HSP 1 Score: 1069 bits (2764), Expect = 0.000e+0
Identity = 817/817 (100.00%), Postives = 817/817 (100.00%), Query Frame = 0 
Query:    1 MAEEARTRRCASRQAAESASTAQTNQELQQEAQLEVMRDDLGDTAHALQVVTGRCTELTKQLQASALEIQQLRQALVASEDKWHHAAGGACVKLEXXXXXXXXXXXXXATGGASRRHTVGASAADELEAAQAEAMEYDRVQRSLAAVGTDDGRPSPAGVQRAAALLEVQQCKHAAATAADMHQRAAVLAAAELKTARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEASDNARQRSLEEARQQHKEALAALRREADNKDAELQALREVLYTTQHELQQLQSAHETQLRAHAQQVAAFKQEAADLRAVLSNEASSHTTALATAEQRAQASAXXXXEQQFHEQLAAKNALQQQLLRARESARAEAQEAAHRLEVERARHRQERVQLHVTEQQLRSDLQAQREEAAQNAARLADAMHRLQTAEASTTAALAEVAAAHAHAASTEAAVLSQDEALETATSQVAQVLLERDRIKSALEAALAEHSERLMAAELHCRRAAISGSAALAAKNVELASLSNRLDAACTERDALQAQLRSTTRLHKLWHRSSASSDTSQLALRSSLDKGVEAAAQIASAAATEGSASPXXXXXXXXXQSLRRWSRKRQQVTEAHAGSGGAEQTTRWSMPLAVQQVQPCKDMGSPRHRRVSQRRSQIGDSGAASPSDTLEEEDLLSFGVPQLWGVNKAQDLQGQQELHALQRSLKETLRALGTAEQRA 817
            MAEEARTRRCASRQAAESASTAQTNQELQQEAQLEVMRDDLGDTAHALQVVTGRCTELTKQLQASALEIQQLRQALVASEDKWHHAAGGACVKLEXXXXXXXXXXXXXATGGASRRHTVGASAADELEAAQAEAMEYDRVQRSLAAVGTDDGRPSPAGVQRAAALLEVQQCKHAAATAADMHQRAAVLAAAELKTARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEASDNARQRSLEEARQQHKEALAALRREADNKDAELQALREVLYTTQHELQQLQSAHETQLRAHAQQVAAFKQEAADLRAVLSNEASSHTTALATAEQRAQASAXXXXEQQFHEQLAAKNALQQQLLRARESARAEAQEAAHRLEVERARHRQERVQLHVTEQQLRSDLQAQREEAAQNAARLADAMHRLQTAEASTTAALAEVAAAHAHAASTEAAVLSQDEALETATSQVAQVLLERDRIKSALEAALAEHSERLMAAELHCRRAAISGSAALAAKNVELASLSNRLDAACTERDALQAQLRSTTRLHKLWHRSSASSDTSQLALRSSLDKGVEAAAQIASAAATEGSASPXXXXXXXXXQSLRRWSRKRQQVTEAHAGSGGAEQTTRWSMPLAVQQVQPCKDMGSPRHRRVSQRRSQIGDSGAASPSDTLEEEDLLSFGVPQLWGVNKAQDLQGQQELHALQRSLKETLRALGTAEQRA
Sbjct:    1 MAEEARTRRCASRQAAESASTAQTNQELQQEAQLEVMRDDLGDTAHALQVVTGRCTELTKQLQASALEIQQLRQALVASEDKWHHAAGGACVKLEXXXXXXXXXXXXXATGGASRRHTVGASAADELEAAQAEAMEYDRVQRSLAAVGTDDGRPSPAGVQRAAALLEVQQCKHAAATAADMHQRAAVLAAAELKTARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEASDNARQRSLEEARQQHKEALAALRREADNKDAELQALREVLYTTQHELQQLQSAHETQLRAHAQQVAAFKQEAADLRAVLSNEASSHTTALATAEQRAQASAXXXXEQQFHEQLAAKNALQQQLLRARESARAEAQEAAHRLEVERARHRQERVQLHVTEQQLRSDLQAQREEAAQNAARLADAMHRLQTAEASTTAALAEVAAAHAHAASTEAAVLSQDEALETATSQVAQVLLERDRIKSALEAALAEHSERLMAAELHCRRAAISGSAALAAKNVELASLSNRLDAACTERDALQAQLRSTTRLHKLWHRSSASSDTSQLALRSSLDKGVEAAAQIASAAATEGSASPXXXXXXXXXQSLRRWSRKRQQVTEAHAGSGGAEQTTRWSMPLAVQQVQPCKDMGSPRHRRVSQRRSQIGDSGAASPSDTLEEEDLLSFGVPQLWGVNKAQDLQGQQELHALQRSLKETLRALGTAEQRA 817
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348378 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z2B3_9STRA0.000e+0100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 186..213
NoneNo IPR availableCOILSCoilCoilcoord: 617..637
NoneNo IPR availableCOILSCoilCoilcoord: 55..82
NoneNo IPR availableCOILSCoilCoilcoord: 289..309
NoneNo IPR availableCOILSCoilCoilcoord: 501..528
NoneNo IPR availableCOILSCoilCoilcoord: 796..816
NoneNo IPR availableCOILSCoilCoilcoord: 454..489
NoneNo IPR availableCOILSCoilCoilcoord: 321..391
NoneNo IPR availableCOILSCoilCoilcoord: 578..598
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 685..727
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 739..772
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:640712..644530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348378mRNA_4935Tribonema minus UTEX_B_3156 mRNAContig_23 640712..644531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348378|estExt_Genemark1.C_Ctg_230073 ID=Trimin1|348378|estExt_Genemark1.C_Ctg_230073|Name=jgi.p|Trimin1|348378|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=817bp
MAEEARTRRCASRQAAESASTAQTNQELQQEAQLEVMRDDLGDTAHALQV
VTGRCTELTKQLQASALEIQQLRQALVASEDKWHHAAGGACVKLESAMLE
VQQLRRATATGGASRRHTVGASAADELEAAQAEAMEYDRVQRSLAAVGTD
DGRPSPAGVQRAAALLEVQQCKHAAATAADMHQRAAVLAAAELKTARAEI
SQLQAASAAAAERLRQSSTRTASELAAAVMKAEQMKLALEAAKAHHALAA
EKSEANVQAALLRSSQLDMALADAHTSYQLTIAEAALKHEATAREAQNLR
GALKAAEENLDLRAGAGDAERARALRQVQQLQEQLEASDNARQRSLEEAR
QQHKEALAALRREADNKDAELQALREVLYTTQHELQQLQSAHETQLRAHA
QQVAAFKQEAADLRAVLSNEASSHTTALATAEQRAQASATAAAEQQFHEQ
LAAKNALQQQLLRARESARAEAQEAAHRLEVERARHRQERVQLHVTEQQL
RSDLQAQREEAAQNAARLADAMHRLQTAEASTTAALAEVAAAHAHAASTE
AAVLSQDEALETATSQVAQVLLERDRIKSALEAALAEHSERLMAAELHCR
RAAISGSAALAAKNVELASLSNRLDAACTERDALQAQLRSTTRLHKLWHR
SSASSDTSQLALRSSLDKGVEAAAQIASAAATEGSASPAVPSVPRSPQSL
RRWSRKRQQVTEAHAGSGGAEQTTRWSMPLAVQQVQPCKDMGSPRHRRVS
QRRSQIGDSGAASPSDTLEEEDLLSFGVPQLWGVNKAQDLQGQQELHALQ
RSLKETLRALGTAEQRA
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