Trimin1|348347|estExt_Genemark1.C_Ctg_230022 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348347
Unique NameTrimin1|348347|estExt_Genemark1.C_Ctg_230022
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length234
Homology
BLAST of jgi.p|Trimin1|348347 vs. uniprot
Match: A0A835Z275_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z275_9STRA)

HSP 1 Score: 400 bits (1029), Expect = 3.870e-140
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
Query:    1 MSDMSARRLRHEAMALQKNPVENIQALPLETNILEWHYVITGTKGTPFEGGYYHGLLRFPAEYPLKPPSILMYTPNGRFATNRRLCLSNSDFHPESWNPVWGVSTILMGLYSFMLDTAPTLGSVTTSAAAKRKFAEESLAFNVRDKNFCALFPELADLHVALELQKQLEPRAAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAEEPGGLTVFVCLIVIMGVLAVILRLG 233
            MSDMSARRLRHEAMALQKNPVENIQALPLETNILEWHYVITGTKGTPFEGGYYHGLLRFPAEYPLKPPSILMYTPNGRFATNRRLCLSNSDFHPESWNPVWGVSTILMGLYSFMLDTAPTLGSVTTSAAAKRKFAEESLAFNVRDKNFCALFPELADLHVALELQKQLEPRAAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAEEPGGLTVFVCLIVIMGVLAVILRLG
Sbjct:    1 MSDMSARRLRHEAMALQKNPVENIQALPLETNILEWHYVITGTKGTPFEGGYYHGLLRFPAEYPLKPPSILMYTPNGRFATNRRLCLSNSDFHPESWNPVWGVSTILMGLYSFMLDTAPTLGSVTTSAAAKRKFAEESLAFNVRDKNFCALFPELADLHVALELQKQLEPRAAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAEEPGGLTVFVCLIVIMGVLAVILRLG 233          
BLAST of jgi.p|Trimin1|348347 vs. uniprot
Match: A0A6H5JE14_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE14_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 9.690e-77
Identity = 108/158 (68.35%), Postives = 134/158 (84.81%), Query Frame = 0
Query:    2 SDMSARRLRHEAMALQKNPVENIQALPLETNILEWHYVITGTKGTPFEGGYYHGLLRFPAEYPLKPPSILMYTPNGRFATNRRLCLSNSDFHPESWNPVWGVSTILMGLYSFMLDTAPTLGSVTTSAAAKRKFAEESLAFNVRDKNFCALFPELADLH 159
            SDM+ +RLR E MA+++NP++NI A+P++ NILEWHYVITGTKG+P+EGG+YHG L+FP EYP+KPPS++M TPNGRFA +RRLCLS SDFHPESWNPVW VSTILMGLYSFMLD A TLGS+T+S A K++FA ESL  N ++  F  LFP+L +LH
Sbjct:    3 SDMATKRLRKELMAIKRNPIDNIVAMPMDNNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPMKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNPVWSVSTILMGLYSFMLDNAATLGSITSSTAQKKRFATESLEVNCKNPAFRKLFPDLVELH 160          
BLAST of jgi.p|Trimin1|348347 vs. uniprot
Match: A0A7R9W6X2_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6X2_9STRA)

HSP 1 Score: 239 bits (611), Expect = 1.260e-76
Identity = 117/172 (68.02%), Postives = 135/172 (78.49%), Query Frame = 0
Query:    2 SDMSARRLRHEAMALQKNPVEN--IQALPLETNILEWHYVITGTKGTPFEGGYYHGLLRFPAEYPLKPPSILMYTPNGRFATNRRLCLSNSDFHPESWNPVWGVSTILMGLYSFMLDTAPTLGSVTTSAAAKRKFAEESLAFNVRDKNFCALFPELADLHVALELQKQLEPR 171
            +DM  RRL  E  +LQKNP+ N  I A P E+NILEWHYVI G+KGTP+EGG+YHG L FP EYPLKPPS++M TP+GRF  NRRLCLS SDFHPESWNP+W VSTIL GLYSFM++TAPTLGS+ TS A KRK A +SL FNVRD NFC LFP+ ADLH     +K+LE R
Sbjct:    3 NDMCTRRLTRELQSLQKNPLLNPRIVATPHESNILEWHYVIEGSKGTPYEGGHYHGKLVFPKEYPLKPPSVIMLTPSGRFKPNRRLCLSMSDFHPESWNPMWSVSTILTGLYSFMVETAPTLGSIETSEAQKRKLARQSLDFNVRDSNFCTLFPDYADLH-----KKRLEER 169          
BLAST of jgi.p|Trimin1|348347 vs. uniprot
Match: A0A7S2H9E8_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2H9E8_9STRA)

HSP 1 Score: 233 bits (595), Expect = 2.680e-74
Identity = 110/160 (68.75%), Postives = 128/160 (80.00%), Query Frame = 0
Query:    2 SDMSARRLRHEAMALQKNPVEN--IQALPLETNILEWHYVITGTKGTPFEGGYYHGLLRFPAEYPLKPPSILMYTPNGRFATNRRLCLSNSDFHPESWNPVWGVSTILMGLYSFMLDTAPTLGSVTTSAAAKRKFAEESLAFNVRDKNFCALFPELADLH 159
            +DM  RRL  E  +LQKNP+ +  I A+P E NILEWHYVI G  GTP+EGG+YHG L FP EYPLKPPS++M TP+GRF  NRRLCLS SDFHPESWNP+W VSTIL GLYSFM++TAPTLGS+ TS A KRKFA +SL FNVRD+ FC LFP+L +LH
Sbjct:    3 NDMCVRRLTRELQSLQKNPLHSPRIVAMPNEENILEWHYVIEGNTGTPYEGGHYHGKLIFPKEYPLKPPSVIMLTPSGRFKPNRRLCLSMSDFHPESWNPMWSVSTILTGLYSFMVETAPTLGSIETSTAQKRKFARQSLDFNVRDQMFCKLFPDLVELH 162          
BLAST of jgi.p|Trimin1|348347 vs. uniprot
Match: A0A8K1FI92_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI92_PYTOL)

HSP 1 Score: 227 bits (578), Expect = 1.550e-72
Identity = 106/158 (67.09%), Postives = 123/158 (77.85%), Query Frame = 0
Query:    2 SDMSARRLRHEAMALQKNPVENIQALPLETNILEWHYVITGTKGTPFEGGYYHGLLRFPAEYPLKPPSILMYTPNGRFATNRRLCLSNSDFHPESWNPVWGVSTILMGLYSFMLDTAPTLGSVTTSAAAKRKFAEESLAFNVRDKNFCALFPELADLH 159
            S M+  RLR E +ALQK PVENI+A PLE NILEWHYVITGT  TP+EGGYYHG LRFP EYP+KPPS+LM TPNGRF  NRR+CLS SDFHPE+WNP+W V +IL GLYSFML+   T G + TS   KR+FA+ SLA N +DK F  LFP+L +LH
Sbjct:    3 SSMATSRLRKEYIALQKKPVENIRAAPLEKNILEWHYVITGTADTPYEGGYYHGKLRFPPEYPMKPPSVLMLTPNGRFEVNRRICLSMSDFHPETWNPLWSVGSILTGLYSFMLENEITTGGIETSDDEKREFAQASLATNCQDKTFQTLFPDLVELH 160          
BLAST of jgi.p|Trimin1|348347 vs. uniprot
Match: A0A8K1FJB7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJB7_PYTOL)

HSP 1 Score: 228 bits (581), Expect = 2.920e-72
Identity = 105/158 (66.46%), Postives = 126/158 (79.75%), Query Frame = 0
Query:    2 SDMSARRLRHEAMALQKNPVENIQALPLETNILEWHYVITGTKGTPFEGGYYHGLLRFPAEYPLKPPSILMYTPNGRFATNRRLCLSNSDFHPESWNPVWGVSTILMGLYSFMLDTAPTLGSVTTSAAAKRKFAEESLAFNVRDKNFCALFPELADLH 159
            S M+ +RLR E +A+Q+ PVENIQALPLE+NILEWHYVI GT GTP+EGGYYHG L+FP EYP+KPPS++M TPNGRF TN+RLCLS SDFHPE+WNP+W VS+IL GLYSFM++   T GS+ T+ A KRK A ESL  N  +  F  LFPEL +LH
Sbjct:    3 SAMATKRLRKEYLAIQRKPVENIQALPLESNILEWHYVIQGTSGTPYEGGYYHGCLKFPPEYPMKPPSVMMMTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMIENQSTYGSIKTTDAQKRKHAAESLEVNCNNALFRKLFPELVELH 160          
BLAST of jgi.p|Trimin1|348347 vs. uniprot
Match: A0A7S2A1W1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A1W1_TRICV)

HSP 1 Score: 228 bits (580), Expect = 5.920e-72
Identity = 114/172 (66.28%), Postives = 131/172 (76.16%), Query Frame = 0
Query:    2 SDMSARRLRHEAMALQKNPVEN--IQALPLETNILEWHYVITGTKGTPFEGGYYHGLLRFPAEYPLKPPSILMYTPNGRFATNRRLCLSNSDFHPESWNPVWGVSTILMGLYSFMLDTAPTLGSVTTSAAAKRKFAEESLAFNVRDKNFCALFPELADLHVALELQKQLEPR 171
            SDM  RRL  E  ALQKNP+ N  I A+P ETNILEWHYV+ GT   P+EGG+YHG L FP EYPLKPPS++M TP+GRF  NRRLCLS SDFHPESWNP+W VSTIL GLYSFM++TAPTLGS+ TS   KRK A +SL FNVRD NFC LFP+  +LH     +K+LE R
Sbjct:    3 SDMCTRRLTRELRALQKNPLMNPRIVAVPNETNILEWHYVLEGTG--PYEGGHYHGKLIFPKEYPLKPPSVIMLTPSGRFKPNRRLCLSMSDFHPESWNPMWSVSTILTGLYSFMVETAPTLGSIETSDGQKRKLARQSLDFNVRDSNFCKLFPDYVELH-----KKRLEER 167          
BLAST of jgi.p|Trimin1|348347 vs. uniprot
Match: A0A3F2RXI9_9STRA (UBC core domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXI9_9STRA)

HSP 1 Score: 227 bits (579), Expect = 7.870e-72
Identity = 105/167 (62.87%), Postives = 133/167 (79.64%), Query Frame = 0
Query:    2 SDMSARRLRHEAMALQKNPVENIQALPLETNILEWHYVITGTKGTPFEGGYYHGLLRFPAEYPLKPPSILMYTPNGRFATNRRLCLSNSDFHPESWNPVWGVSTILMGLYSFMLDTAPTLGSVTTSAAAKRKFAEESLAFNVRDKNFCALFPELADLHVALELQKQL 168
            S M+ +RLR E +A+Q+ PV+ IQA+P+ETNILEWHYVITGTKGTP+EGGYYHG L+FP EYP+KPPS++M TPNGRF TN+RLCLS SDFHPE+WNP+W VS+IL GLYSFML+T  TLGS++T+ A KRK+A  SL  N  +  F  LFP+L  L    + +++L
Sbjct:    3 SVMATKRLRKEYLAMQRKPVDYIQAVPVETNILEWHYVITGTKGTPYEGGYYHGKLKFPPEYPMKPPSVMMTTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLETQATLGSISTTDAQKRKYAAASLEANCTNATFRKLFPDLVTLQEQRDKEQEL 169          
BLAST of jgi.p|Trimin1|348347 vs. uniprot
Match: K3WBL8_GLOUD (UBC core domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBL8_GLOUD)

HSP 1 Score: 224 bits (572), Expect = 1.540e-71
Identity = 104/158 (65.82%), Postives = 122/158 (77.22%), Query Frame = 0
Query:    2 SDMSARRLRHEAMALQKNPVENIQALPLETNILEWHYVITGTKGTPFEGGYYHGLLRFPAEYPLKPPSILMYTPNGRFATNRRLCLSNSDFHPESWNPVWGVSTILMGLYSFMLDTAPTLGSVTTSAAAKRKFAEESLAFNVRDKNFCALFPELADLH 159
            S M+  RLR E + LQ+ PV+NIQA P E NILEWHYVITGT  +P+EGGYYHG LRFP EYP+KPP++LM TPNGRF  NRR+CLS SDFHPE+WNPVW V +IL GLYSFML+   T GS+ T+   KRKFA ESLA N  +K+FC LFP L +LH
Sbjct:    3 SAMATNRLRKEYVNLQRKPVDNIQAAPQEKNILEWHYVITGTPDSPYEGGYYHGKLRFPPEYPMKPPAVLMLTPNGRFEVNRRICLSMSDFHPETWNPVWAVGSILTGLYSFMLEDQITTGSIETTDEEKRKFAAESLAVNCTNKDFCTLFPHLVELH 160          
BLAST of jgi.p|Trimin1|348347 vs. uniprot
Match: H3GEL5_PHYRM (UBC core domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GEL5_PHYRM)

HSP 1 Score: 224 bits (572), Expect = 2.450e-71
Identity = 103/160 (64.38%), Postives = 128/160 (80.00%), Query Frame = 0
Query:    2 SDMSARRLRHEAMALQKNPVENIQALPLETNILEWHYVITGTKGTPFEGGYYHGLLRFPAEYPLKPPSILMYTPNGRFATNRRLCLSNSDFHPESWNPVWGVSTILMGLYSFMLDTAPTLGSVTTSAAAKRKFAEESLAFNVRDKNFCALFPELADLHVA 161
            S M+ +RLR E +ALQKNPVENI+A PLE NILEWHYVI+GT+GTP+EGG+YHG L+FP+EYP+KPP+++M TPNGRF TNRR+CLS SDFHPE+WNP+W V +IL GLYSFML+   T GS+ T+   KR +A  SL +N +DKNF  LF EL +L  A
Sbjct:    3 SAMATKRLRKEYLALQKNPVENIRAAPLEKNILEWHYVISGTEGTPYEGGFYHGKLKFPSEYPMKPPAVIMCTPNGRFETNRRICLSMSDFHPETWNPLWAVGSILTGLYSFMLEDKITTGSIETTEEDKRTYATVSLEYNCKDKNFRGLFTELVELQNA 162          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348347 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z275_9STRA3.870e-140100.00Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A6H5JE14_9PHAE9.690e-7768.35UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A7R9W6X2_9STRA1.260e-7668.02Hypothetical protein n=2 Tax=Pseudictyota dubia Ta... [more]
A0A7S2H9E8_9STRA2.680e-7468.75Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID... [more]
A0A8K1FI92_PYTOL1.550e-7267.09Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A8K1FJB7_PYTOL2.920e-7266.46Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2A1W1_TRICV5.920e-7266.28Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A3F2RXI9_9STRA7.870e-7262.87UBC core domain-containing protein n=3 Tax=Phytoph... [more]
K3WBL8_GLOUD1.540e-7165.82UBC core domain-containing protein n=1 Tax=Globisp... [more]
H3GEL5_PHYRM2.450e-7164.38UBC core domain-containing protein n=1 Tax=Phytoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 7..161
e-value: 2.9E-28
score: 109.9
NoneNo IPR availablePANTHERPTHR24067:SF257UBIQUITIN CONJUGATING ENZYMEcoord: 3..159
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 3..159
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..176
e-value: 6.0E-52
score: 177.7
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 5..143
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 8..122
e-value: 4.7E-18
score: 65.2
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 4..154
score: 37.590351
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 7..119
e-value: 5.22515E-41
score: 135.022

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:259214..260375 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348347mRNA_4871Tribonema minus UTEX_B_3156 mRNAContig_23 259135..260504 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348347|estExt_Genemark1.C_Ctg_230022 ID=Trimin1|348347|estExt_Genemark1.C_Ctg_230022|Name=jgi.p|Trimin1|348347|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=234bp
MSDMSARRLRHEAMALQKNPVENIQALPLETNILEWHYVITGTKGTPFEG
GYYHGLLRFPAEYPLKPPSILMYTPNGRFATNRRLCLSNSDFHPESWNPV
WGVSTILMGLYSFMLDTAPTLGSVTTSAAAKRKFAEESLAFNVRDKNFCA
LFPELADLHVALELQKQLEPRAAKKAAANGSGGGGGGAAAGGGGAGATAA
TAAAPRAEEPGGLTVFVCLIVIMGVLAVILRLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2