Trimin1|348334|estExt_Genemark1.C_Ctg_220139 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348334
Unique NameTrimin1|348334|estExt_Genemark1.C_Ctg_220139
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length784
Homology
BLAST of jgi.p|Trimin1|348334 vs. uniprot
Match: A0A835Z2T4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2T4_9STRA)

HSP 1 Score: 1015 bits (2624), Expect = 0.000e+0
Identity = 783/783 (100.00%), Postives = 783/783 (100.00%), Query Frame = 0
Query:    1 MPNRAGKERSRSLEEEPLDSADEGPLLLRKGFSVKVLKTENTTARFPYLIGCQGVIQDVPQHPNTWYKVQVDNRIYTLRPSALELVDEGGEAGDEPGDTTAVAPNADTEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRPMRDAAREKDPLAAPKDRPQRPRSSAXXXXXXXXXAADRERSPGSTGXXXXXXXXXDREXXXXXXXXXXGAGGEVAQHTLESAMEAVKAGVDVPLTAIDTELWPGCFVKILAGKLKGKVGKVLRSGNGWVNLMTQLGEKATRAGDLLLALEQPAKRTGHASGSDDXXXESFADRQEAELDAGPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRRSRATPVDDADTEEAAFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKEPRLPQRDARREDRRAAQLRRGXXXXXXXXXXXXXXXXMERDDAPAGLPNRGRDRAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYREVARRQWDVQIQRGRERPNLTHWRDQIDASAREPDQDPEAVDLNFDLMPLRCCVCYVEKPDGDRFCWNSECLASPIFEEFVKPIPGVPSASLVKEDHKDASKGFGGGDKSVGVKKDPDAMDTDEGAPRAQRSGSLTTKGEEGDEEKKLPYENTFKRTTLVDDALAYVLHAPVKWLEAKRRKGTPFESFSLASPALYRWQCWASLEDDPAVSDVDYESGELL 783
            MPNRAGKERSRSLEEEPLDSADEGPLLLRKGFSVKVLKTENTTARFPYLIGCQGVIQDVPQHPNTWYKVQVDNRIYTLRPSALELVDEGGEAGDEPGDTTAVAPNADTEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRPMRDAAREKDPLAAPKDRPQRPRSSAXXXXXXXXXAADRERSPGSTGXXXXXXXXXDREXXXXXXXXXXGAGGEVAQHTLESAMEAVKAGVDVPLTAIDTELWPGCFVKILAGKLKGKVGKVLRSGNGWVNLMTQLGEKATRAGDLLLALEQPAKRTGHASGSDDXXXESFADRQEAELDAGPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRRSRATPVDDADTEEAAFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKEPRLPQRDARREDRRAAQLRRGXXXXXXXXXXXXXXXXMERDDAPAGLPNRGRDRAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYREVARRQWDVQIQRGRERPNLTHWRDQIDASAREPDQDPEAVDLNFDLMPLRCCVCYVEKPDGDRFCWNSECLASPIFEEFVKPIPGVPSASLVKEDHKDASKGFGGGDKSVGVKKDPDAMDTDEGAPRAQRSGSLTTKGEEGDEEKKLPYENTFKRTTLVDDALAYVLHAPVKWLEAKRRKGTPFESFSLASPALYRWQCWASLEDDPAVSDVDYESGELL
Sbjct:    1 MPNRAGKERSRSLEEEPLDSADEGPLLLRKGFSVKVLKTENTTARFPYLIGCQGVIQDVPQHPNTWYKVQVDNRIYTLRPSALELVDEGGEAGDEPGDTTAVAPNADTEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRPMRDAAREKDPLAAPKDRPQRPRSSAXXXXXXXXXAADRERSPGSTGXXXXXXXXXDREXXXXXXXXXXGAGGEVAQHTLESAMEAVKAGVDVPLTAIDTELWPGCFVKILAGKLKGKVGKVLRSGNGWVNLMTQLGEKATRAGDLLLALEQPAKRTGHASGSDDXXXESFADRQEAELDAGPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRRSRATPVDDADTEEAAFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKEPRLPQRDARREDRRAAQLRRGXXXXXXXXXXXXXXXXMERDDAPAGLPNRGRDRAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYREVARRQWDVQIQRGRERPNLTHWRDQIDASAREPDQDPEAVDLNFDLMPLRCCVCYVEKPDGDRFCWNSECLASPIFEEFVKPIPGVPSASLVKEDHKDASKGFGGGDKSVGVKKDPDAMDTDEGAPRAQRSGSLTTKGEEGDEEKKLPYENTFKRTTLVDDALAYVLHAPVKWLEAKRRKGTPFESFSLASPALYRWQCWASLEDDPAVSDVDYESGELL 783          
BLAST of jgi.p|Trimin1|348334 vs. uniprot
Match: D8LBE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBE8_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 1.600e-29
Identity = 77/215 (35.81%), Postives = 101/215 (46.98%), Query Frame = 0
Query:  563 EVARRQWDVQIQRGRERPNLTHWRDQIDASAREPDQDPEAVDLNFDLMPLRCCVCYVEKPDGDRFCWNSECLASPIFEEFVKPIPGVPSASLVKEDHKDASKGFGGGDKSVGVKKDPDAMDTDEGAPRAQRSGSLTTKGEEGDEEKKLPYENTFKRTTLVDDALAYVLHAPVKWLEAKRRKGTPFESFSLASPALYRWQCWASLEDDPAVSDVDY 777
            EV +  W  Q+Q+ +ERPNL HWRD++ A  ++  +D E   L+ +LM +RC VCY EK DGD+FCWN +C  SP+F  +                        G  D+ +               P  Q +G                Y NTF R TL+D AL   L APVKWLE KR++           PALYRWQCWASL  +P   D  +
Sbjct:  422 EVIKSSWVHQMQKAKERPNLVHWRDELVAITKDSSEDFEDATLSVELMRVRCDVCYHEKSDGDKFCWNEKCWMSPVFSGYCHT---------------------GANDEVIAP------------TPVQQSAG----------------YINTFGRETLIDPALTSALQAPVKWLETKRKRKLEAHEVFSEDPALYRWQCWASLSKNPNSKDPTF 587          
BLAST of jgi.p|Trimin1|348334 vs. uniprot
Match: A0A7S4E8A6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E8A6_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 5.650e-11
Identity = 74/281 (26.33%), Postives = 98/281 (34.88%), Query Frame = 0
Query:   28 LRKGFSVKVLKTENTTARFPYLIGCQGVIQDVPQHPNTWYKVQ-VDNRIYTLRPSALELVDEGGEAGDEPGDTTAVAPNADTEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRPMRDAAREKDPLAAPKDRPQRPRSSAXXXXXXXXXAADRERSPGSTGXXXXXXXXXDREXXXXXXXXXXGAGGEVAQHTLESAMEAVKAGVDVPLTAIDTELWPGCFVKILAGKLKGKVGKVLRSGNGWVNLMTQLGEKATRAGDLLLALEQPAKR 307
            L++G  V + +TEN   R P+LIG  G I++VPQHPNTW+KVQ  D R+ T RPSAL  V  G +                                                              R  + + +P   P+ R  R  SS                    TG                                                 A+D E W G  V++  G+L G+VG++LRSGNGWV L T  GE A RA +L L  E+ A+R
Sbjct:   96 LKRGTQVAIHRTENVQQRAPHLIGRIGTIKEVPQHPNTWFKVQFADRRVCTFRPSALRRVASGAQRS------------------------------------------------------------RKGSDDDEPQQKPRGRGARLLSSVL------------------TGR------------------------------------------------AVDAERWVGTHVRVRVGRLGGQVGRILRSGNGWVQLRTARGEIAKRAYELELVDEKDAER 250          
BLAST of jgi.p|Trimin1|348334 vs. uniprot
Match: A0A7R9UGB2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGB2_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.640e-10
Identity = 35/60 (58.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query:   28 LRKGFSVKVLKTENTTARFPYLIGCQGVIQDVPQHPNTWYKVQVDN-RIYTLRPSALELV 86
            L+KG  V++L+TEN   R P+LIG +GVI +VPQHPNTW+KV+  + + YT RPSAL+LV
Sbjct:   28 LQKGGQVQILRTENVQQRAPHLIGLKGVIVEVPQHPNTWFKVRFSHGKTYTFRPSALKLV 87          
BLAST of jgi.p|Trimin1|348334 vs. uniprot
Match: A0A6U4F2P5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4F2P5_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.960e-9
Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 0
Query:   28 LRKGFSVKVLKTENTTARFPYLIGCQGVIQDVPQHPNTWYKVQV-DNRIYTLRPSALELVDEGG 90
            L+KG SV +++TEN   R  +LIG QGVI  VPQHPNTW+KV+  D + +T RPSAL L +  G
Sbjct:   14 LQKGLSVVIVRTENVQQRASHLIGLQGVIVAVPQHPNTWFKVRFKDGKTHTFRPSALRLTEGSG 77          
BLAST of jgi.p|Trimin1|348334 vs. uniprot
Match: A0A484EC74_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EC74_BRELC)

HSP 1 Score: 69.7 bits (169), Expect = 1.680e-8
Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 0
Query:   28 LRKGFSVKVLKTENTTARFPYLIGCQGVIQDVPQHPNTWYKVQV--DNRIYTLRPSALELVDEGGEAG 93
            L KG  V++LKT +   R P+     GV+ +VPQHPNTW+KV++   + +Y  RPSALE++DEG ++G
Sbjct:  132 LEKGTLVRILKTPDVDQRVPHTAFKMGVVDEVPQHPNTWFKVRILDGDVVYKYRPSALEVLDEGDDSG 199          
BLAST of jgi.p|Trimin1|348334 vs. uniprot
Match: A0A3M6VT65_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VT65_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 8.580e-8
Identity = 30/68 (44.12%), Postives = 47/68 (69.12%), Query Frame = 0
Query:   28 LRKGFSVKVLKTENTTARFPYLIGCQGVIQDVPQHPNTWYKVQVDNR--IYTLRPSALELVDEGGEAG 93
            L +G  V++LKT +   R P+ +   GV+++VP HPNTWYKV++ +   +Y  RPSALE++++G E G
Sbjct:   93 LEQGTLVRILKTPDVEQRVPHTMNKIGVVEEVPHHPNTWYKVRIRDGDVVYKYRPSALEVLEDGDEVG 160          
BLAST of jgi.p|Trimin1|348334 vs. uniprot
Match: M4BF76_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BF76_HYAAE)

HSP 1 Score: 67.0 bits (162), Expect = 1.060e-7
Identity = 37/97 (38.14%), Postives = 55/97 (56.70%), Query Frame = 0
Query:   14 EEEPLDSADEGPL-----------------LLRKGFSVKVLKTENTTARFPYLIGCQGVIQDVPQHPNTWYKVQVDNR--IYTLRPSALELVDEGGE 91
            EE P+D ADE  L                  L++G  V +LKT +   R P+     GV+++VPQHPNTW+KV++ +   +Y  RPSALE++++G E
Sbjct:   70 EEPPVDEADEAELDAIDSAYRISVTSRDLHTLQQGTLVSILKTPDVEQRVPHTAHKVGVVEEVPQHPNTWFKVRIRDGDVVYKYRPSALEVLEDGDE 166          
BLAST of jgi.p|Trimin1|348334 vs. uniprot
Match: A0A225X1C8_9STRA (EF-hand domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X1C8_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.630e-7
Identity = 37/95 (38.95%), Postives = 53/95 (55.79%), Query Frame = 0
Query:   17 PLDSADEGPL-----------------LLRKGFSVKVLKTENTTARFPYLIGCQGVIQDVPQHPNTWYKVQVDNR--IYTLRPSALELVDEGGEA 92
            P+D ADE  L                  L KG  V+VL T +   R P+ I   GV+++VP HPNTW+KV++ +   +Y  RPSALE++++G EA
Sbjct:   59 PIDEADEAELDALDAAYRISPTARELHTLEKGTLVRVLTTPDVEQRVPHTIQKVGVVEEVPMHPNTWFKVRIRDGDVVYKYRPSALEVLEDGDEA 153          
BLAST of jgi.p|Trimin1|348334 vs. uniprot
Match: W2NQR0_PHYPR (Uncharacterized protein (Fragment) n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NQR0_PHYPR)

HSP 1 Score: 64.7 bits (156), Expect = 5.510e-7
Identity = 34/92 (36.96%), Postives = 52/92 (56.52%), Query Frame = 0
Query:   17 PLDSADEGPL-----------------LLRKGFSVKVLKTENTTARFPYLIGCQGVIQDVPQHPNTWYKVQVDNR--IYTLRPSALELVDEG 89
            P+D ADE  L                  L KG  V++LKT +   R P+ +   GV+++VP HPNTW+KV++ +   +Y  RPSALE++++G
Sbjct:   75 PVDEADEAELDAIDAAYRISPTARELHTLEKGTLVRILKTPDVEQRVPHTLHKVGVVEEVPMHPNTWFKVRIRDGDVVYKYRPSALEVLEDG 166          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348334 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z2T4_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LBE8_ECTSI1.600e-2935.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4E8A6_9STRA5.650e-1126.33Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7R9UGB2_9STRA1.640e-1058.33Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U4F2P5_9STRA1.960e-954.69Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A484EC74_BRELC1.680e-847.06Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A3M6VT65_9STRA8.580e-844.12Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
M4BF76_HYAAE1.060e-738.14Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A225X1C8_9STRA1.630e-738.95EF-hand domain-containing protein n=1 Tax=Phytopht... [more]
W2NQR0_PHYPR5.510e-736.96Uncharacterized protein (Fragment) n=8 Tax=Phytoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 544..567
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 654..687
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 421..491
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..556
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 654..712
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
IPR041988Ribosomal protein L26/L24, KOW domainCDDcd06089KOW_RPL26coord: 259..275
e-value: 0.00378366
score: 34.4126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:1229025..1239907 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348334mRNA_6451Tribonema minus UTEX_B_3156 mRNAContig_22 1229025..1239907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348334|estExt_Genemark1.C_Ctg_220139 ID=Trimin1|348334|estExt_Genemark1.C_Ctg_220139|Name=jgi.p|Trimin1|348334|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=784bp
MPNRAGKERSRSLEEEPLDSADEGPLLLRKGFSVKVLKTENTTARFPYLI
GCQGVIQDVPQHPNTWYKVQVDNRIYTLRPSALELVDEGGEAGDEPGDTT
AVAPNADTEQAGAAGARDADKMAISPSNNARRRSQAHGDDAPSSAEDPAK
RPMRDAAREKDPLAAPKDRPQRPRSSASGSGGGGGSAADRERSPGSTGGA
SSMGDRDDRERGGGGSGGGDGAGGEVAQHTLESAMEAVKAGVDVPLTAID
TELWPGCFVKILAGKLKGKVGKVLRSGNGWVNLMTQLGEKATRAGDLLLA
LEQPAKRTGHASGSDDDDDESFADRQEAELDAGPGGGGGSGGTSGGAGGG
GGGGGGRIGRGGGGESSRHHPRRRSRATPVDDADTEEAAFEGGGGATKAE
ARALGGAGHKVSPKRGSTAAAAWDADERDKRDKGADGAARSKEPRLPQRD
ARREDRRAAQLRRGHDDDGGGGGGEERGGGMERDDAPAGLPNRGRDRAAA
ARAARAAAAAARSSQPTPMEEDADDAAATAALASMPSGGSGLGAAAAAAA
AARAEREREQYREVARRQWDVQIQRGRERPNLTHWRDQIDASAREPDQDP
EAVDLNFDLMPLRCCVCYVEKPDGDRFCWNSECLASPIFEEFVKPIPGVP
SASLVKEDHKDASKGFGGGDKSVGVKKDPDAMDTDEGAPRAQRSGSLTTK
GEEGDEEKKLPYENTFKRTTLVDDALAYVLHAPVKWLEAKRRKGTPFESF
SLASPALYRWQCWASLEDDPAVSDVDYESGELL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041988KOW_RPL26/RPL24