Trimin1|348327|estExt_Genemark1.C_Ctg_220125 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348327
Unique NameTrimin1|348327|estExt_Genemark1.C_Ctg_220125
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length277
Homology
BLAST of jgi.p|Trimin1|348327 vs. uniprot
Match: A0A835Z1K3_9STRA (SAYSvFN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1K3_9STRA)

HSP 1 Score: 486 bits (1252), Expect = 1.070e-172
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0
Query:    1 MPTPSSWWEVVKAVAFELRPFPMPTRGDVAAYSRSALSNAAALASAARAALAVTLRASTLVSVSGYLRLGAWLGAWWLCARAEFGVVFLILSAIAAMFVNLGEEGERGEFSAYSVFNAGCRAILGTLDAQQLERELMHQDVRGGXXXXXXXXXXXXXXGDEDGFVMVDMPGQRRGEGESLERSASRGAFVAGRAETRNPCAPCRLACCGAPQRLQAALARRLFGIKAALRVRRSDANGARPRRRGKKARRNYEQRRQLRADAEVAAALGDELSDED 276
            MPTPSSWWEVVKAVAFELRPFPMPTRGDVAAYSRSALSNAAALASAARAALAVTLRASTLVSVSGYLRLGAWLGAWWLCARAEFGVVFLILSAIAAMFVNLGEEGERGEFSAYSVFNAGCRAILGTLDAQQLERELMHQDVRGGXXXXXXXXXXXXXXGDEDGFVMVDMPGQRRGEGESLERSASRGAFVAGRAETRNPCAPCRLACCGAPQRLQAALARRLFGIKAALRVRRSDANGARPRRRGKKARRNYEQRRQLRADAEVAAALGDELSDED
Sbjct:    1 MPTPSSWWEVVKAVAFELRPFPMPTRGDVAAYSRSALSNAAALASAARAALAVTLRASTLVSVSGYLRLGAWLGAWWLCARAEFGVVFLILSAIAAMFVNLGEEGERGEFSAYSVFNAGCRAILGTLDAQQLERELMHQDVRGGXXXXXXXXXXXXXXGDEDGFVMVDMPGQRRGEGESLERSASRGAFVAGRAETRNPCAPCRLACCGAPQRLQAALARRLFGIKAALRVRRSDANGARPRRRGKKARRNYEQRRQLRADAEVAAALGDELSDED 276          
BLAST of jgi.p|Trimin1|348327 vs. uniprot
Match: A0A6H5L1U7_9PHAE (SAYSvFN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1U7_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 1.450e-27
Identity = 66/135 (48.89%), Postives = 87/135 (64.44%), Query Frame = 0
Query:    7 WWEVVKAVAFELRPFPMPTRGDVAAYSRSALSNAAALASAARAALAVTLRASTLVSVSGYLRLGAWLGAWWLCARAEFGVVFLILSAIAAMFVNLGEEGERGEFSAYSVFNAGCRAILGTLDAQQLERELMHQDV 141
            WW +VKA+AFEL+PF +P   DV A + +  +N   L           L A   V+ S  L L AWL  W L    EFG V+ I+S++A +F+NLGE GE  E+SAYSVFNAGCRA+LGT++A+Q ERE+M Q+V
Sbjct:   16 WWSLVKAIAFELKPFSLPGVEDVKAAAVAVRTNVRQLTDELVRVTPEALGAVKAVNPSRALGLMAWLCGWALFIWLEFGAVYFIISSMAMIFMNLGERGE-SEWSAYSVFNAGCRALLGTINAEQFEREIMRQNV 149          
BLAST of jgi.p|Trimin1|348327 vs. uniprot
Match: D7FWA2_ECTSI (SAYSvFN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWA2_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 1.280e-26
Identity = 64/135 (47.41%), Postives = 87/135 (64.44%), Query Frame = 0
Query:    7 WWEVVKAVAFELRPFPMPTRGDVAAYSRSALSNAAALASAARAALAVTLRASTLVSVSGYLRLGAWLGAWWLCARAEFGVVFLILSAIAAMFVNLGEEGERGEFSAYSVFNAGCRAILGTLDAQQLERELMHQDV 141
            WW VVKA+AFEL+PF +P+  DV A + +  +N   +           + A   V+    L L AWL  W L    EFG V+ I+S++A +F+NLGE GE  E+SAYSVFNAGCRA+LGT++A+Q ERE+M Q+V
Sbjct:   16 WWSVVKAIAFELKPFSLPSVEDVKAAAVAVRTNVRQVVDELVRVTPEAVGAVKAVNPLRALGLLAWLCGWALFIWLEFGAVYFIISSMAMIFMNLGERGE-SEWSAYSVFNAGCRALLGTINAEQFEREIMRQNV 149          
BLAST of jgi.p|Trimin1|348327 vs. uniprot
Match: UPI0012D47383 (uncharacterized protein LOC116347611 n=1 Tax=Contarinia nasturtii TaxID=265458 RepID=UPI0012D47383)

HSP 1 Score: 68.9 bits (167), Expect = 1.390e-10
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 0
Query:   72 WLGAWWLCARAEFGVVFLILSAIAAMFVNLGEEGER-GEFSAYSVFNAGCRAILGTLDAQQLERELMH 138
            W   W +    +FG+V+L+ SA+  ++ N   E +R GE SAYSVFNA C +I GTL A+QLERE+++
Sbjct:  102 WATCWMIAIELKFGIVYLLFSALFGIYFNTRTEPKRKGEISAYSVFNANCESIKGTLKAEQLEREMIY 169          
BLAST of jgi.p|Trimin1|348327 vs. uniprot
Match: A0A8I6RNH3_CIMLE (SAYSvFN domain-containing protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RNH3_CIMLE)

HSP 1 Score: 66.6 bits (161), Expect = 1.160e-9
Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 0
Query:   67 LRLGAWLGAWWLCARAEFGVVFLILSAIAAMFVNLGE-EGERGEFSAYSVFNAGCRAILGTLDAQQLERELM 137
            LRL  W   ++L  + EFG VFL +SA+  ++ N    + +RGE SAYS+FN  C+ I GTL A+QL+RE++
Sbjct:   89 LRLSLWGSLYYLAIKVEFGTVFLAISALIFIYYNTRTGQKKRGEVSAYSIFNKNCQPIDGTLQAEQLQREML 160          
BLAST of jgi.p|Trimin1|348327 vs. uniprot
Match: UPI0010F69E25 (SAYSvFN domain-containing protein 1 n=2 Tax=Osmia TaxID=124287 RepID=UPI0010F69E25)

HSP 1 Score: 64.7 bits (156), Expect = 3.900e-9
Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 0
Query:   58 STLVSVSGYLRLGAWLGAWWLCARAEFGVVFLILSAIAAMFVNLGEEGER-GEFSAYSVFNAGCRAILGTLDAQQLERELMH 138
            S L +V+  L    W   + +    EFG V+ +LS +  +++N G + ++ GE SAYSVFN  C+AI GTLDA Q ERE+ +
Sbjct:   80 SVLTTVTYLLYFLLWATLYIIAIEFEFGAVYFVLSTLVFIWLNTGSKPKKPGELSAYSVFNPDCKAIEGTLDASQFEREIRY 161          
BLAST of jgi.p|Trimin1|348327 vs. uniprot
Match: UPI0008F9BB31 (uncharacterized protein LOC109042707 n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9BB31)

HSP 1 Score: 64.7 bits (156), Expect = 3.980e-9
Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 0
Query:   72 WLGAWWLCARAEFGVVFLILSAIAAMFVNLGEEGER-GEFSAYSVFNAGCRAILGTLDAQQLERELMH 138
            W   + L   AEFG VF+ILS    ++ N     ++ GE SAYSVFN  C AI G+LDA+QLERE+++
Sbjct:   98 WCSLFGLAVFAEFGAVFVILSGFVIIWANTRTSPKKPGEISAYSVFNPNCEAIQGSLDAKQLEREMLY 165          
BLAST of jgi.p|Trimin1|348327 vs. uniprot
Match: A0A091QL28_9GRUI (SAYSvFN domain-containing protein 1 (Fragment) n=1 Tax=Mesitornis unicolor TaxID=54374 RepID=A0A091QL28_9GRUI)

HSP 1 Score: 62.0 bits (149), Expect = 6.580e-9
Identity = 33/69 (47.83%), Postives = 43/69 (62.32%), Query Frame = 0
Query:   78 LCARAEFGVVFLILSAIAAMFVNLG--EEGERGEFSAYSVFNAGCRAILGTLDAQQLERELMHQDVRGG 144
            L A  E G+ + +LS +  M+       E +RGE SAYSVFN GC  I GTL A+QLEREL+++   GG
Sbjct:   21 LFAELELGLPYFVLSLLYWMYAGTRGPAERQRGELSAYSVFNPGCGPIPGTLTAEQLERELLYRPAAGG 89          
BLAST of jgi.p|Trimin1|348327 vs. uniprot
Match: UPI00071980C3 (SAYSvFN domain-containing protein 1 n=2 Tax=Laurasiatheria TaxID=314145 RepID=UPI00071980C3)

HSP 1 Score: 63.9 bits (154), Expect = 1.270e-8
Identity = 36/79 (45.57%), Postives = 47/79 (59.49%), Query Frame = 0
Query:   67 LRLGAWLGAWWLCARAEFGVVFLILSAIAAMFVNLG--EEGERGEFSAYSVFNAGCRAILGTLDAQQLERELMHQDVRG 143
            L++  WL    L    EFG+ + +LS    M+V     EE + GE SAYSVFN GC+AI GTL A+Q EREL  + + G
Sbjct:  119 LKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGCKAIQGTLTAEQFERELQFRPLEG 197          
BLAST of jgi.p|Trimin1|348327 vs. uniprot
Match: UPI0009A3E511 (SAYSvFN domain-containing protein 1 n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3E511)

HSP 1 Score: 61.6 bits (148), Expect = 1.840e-8
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 0
Query:   72 WLGAWWLCARAEFGVVFLILSAIAAMFVNLGEEGE--RGEFSAYSVFNAGCRAILGTLDAQQLERELMHQDVRG 143
            WL    L    EFG+ F +LS    ++V   +  +  RGE SAYSVFN GC+AI G+L A+Q EREL ++ + G
Sbjct:   45 WLVLLGLFIELEFGLAFFVLSMFYWIYVGTRDPSKKKRGEVSAYSVFNPGCKAIEGSLTAEQFERELQYRPLAG 118          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348327 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z1K3_9STRA1.070e-172100.00SAYSvFN domain-containing protein n=1 Tax=Tribonem... [more]
A0A6H5L1U7_9PHAE1.450e-2748.89SAYSvFN domain-containing protein n=1 Tax=Ectocarp... [more]
D7FWA2_ECTSI1.280e-2647.41SAYSvFN domain-containing protein n=1 Tax=Ectocarp... [more]
UPI0012D473831.390e-1047.06uncharacterized protein LOC116347611 n=1 Tax=Conta... [more]
A0A8I6RNH3_CIMLE1.160e-945.83SAYSvFN domain-containing protein n=1 Tax=Cimex le... [more]
UPI0010F69E253.900e-941.46SAYSvFN domain-containing protein 1 n=2 Tax=Osmia ... [more]
UPI0008F9BB313.980e-948.53uncharacterized protein LOC109042707 n=1 Tax=Bemis... [more]
A0A091QL28_9GRUI6.580e-947.83SAYSvFN domain-containing protein 1 (Fragment) n=1... [more]
UPI00071980C31.270e-845.57SAYSvFN domain-containing protein 1 n=2 Tax=Lauras... [more]
UPI0009A3E5111.840e-844.59SAYSvFN domain-containing protein 1 n=1 Tax=Rhinco... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019387Uncharacterised domain SAYSvFNPFAMPF10260SAYSvFNcoord: 71..136
e-value: 2.8E-23
score: 81.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..186
IPR039159SAYSvFN domain-containing protein 1PANTHERPTHR13527UNCHARACTERIZEDcoord: 54..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:1101211..1104069 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348327mRNA_6437Tribonema minus UTEX_B_3156 mRNAContig_22 1101211..1104279 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348327|estExt_Genemark1.C_Ctg_220125 ID=Trimin1|348327|estExt_Genemark1.C_Ctg_220125|Name=jgi.p|Trimin1|348327|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=277bp
MPTPSSWWEVVKAVAFELRPFPMPTRGDVAAYSRSALSNAAALASAARAA
LAVTLRASTLVSVSGYLRLGAWLGAWWLCARAEFGVVFLILSAIAAMFVN
LGEEGERGEFSAYSVFNAGCRAILGTLDAQQLERELMHQDVRGGGGAGGG
GGDRSDDDGDEDGFVMVDMPGQRRGEGESLERSASRGAFVAGRAETRNPC
APCRLACCGAPQRLQAALARRLFGIKAALRVRRSDANGARPRRRGKKARR
NYEQRRQLRADAEVAAALGDELSDED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019387Uncharacterised_SAYSvFN
IPR039159SAYSD1