Trimin1|348325|estExt_Genemark1.C_Ctg_220121 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348325
Unique NameTrimin1|348325|estExt_Genemark1.C_Ctg_220121
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length119
Homology
BLAST of jgi.p|Trimin1|348325 vs. uniprot
Match: A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)

HSP 1 Score: 216 bits (550), Expect = 7.250e-71
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
Query:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSSA 118
            MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSSA
Sbjct:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSSA 118          
BLAST of jgi.p|Trimin1|348325 vs. uniprot
Match: A0A836CJT3_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT3_9STRA)

HSP 1 Score: 216 bits (550), Expect = 5.470e-69
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
Query:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSSA 118
            MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSSA
Sbjct:  134 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSSA 251          
BLAST of jgi.p|Trimin1|348325 vs. uniprot
Match: D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 7.890e-61
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 0
Query:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117
            MAK PSKK+AKAPKKA D KK+  KRTESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKAGD-KKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116          
BLAST of jgi.p|Trimin1|348325 vs. uniprot
Match: A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.750e-60
Identity = 104/119 (87.39%), Postives = 111/119 (93.28%), Query Frame = 0
Query:    1 MAKIPSKKAAKAPKKAAD-GKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSSA 118
            MAK PSKK+AKAPKK  + GK +K KR ESY +YIYKVLKQVHP+TGISKRGMSIMNSFIND+FERIASEAGKL+RYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSSA
Sbjct:    1 MAKTPSKKSAKAPKKTGEKGKNRKVKRIESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSSA 119          
BLAST of jgi.p|Trimin1|348325 vs. uniprot
Match: A0A835YLA9_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLA9_9STRA)

HSP 1 Score: 187 bits (475), Expect = 3.770e-59
Identity = 99/111 (89.19%), Postives = 105/111 (94.59%), Query Frame = 0
Query:    6 SKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTS 116
            SKKAAKAPKKA +GKK++ KR ESY SYIYKVLKQVHPDTGISKRGMS+MNSFINDVFERIASEAG+LTRYN + TLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTS
Sbjct:   28 SKKAAKAPKKAVEGKKRRPKRVESYSSYIYKVLKQVHPDTGISKRGMSVMNSFINDVFERIASEAGRLTRYNNRQTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTS 138          
BLAST of jgi.p|Trimin1|348325 vs. uniprot
Match: A0A6U0X3U9_9STRA (Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A6U0X3U9_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.740e-58
Identity = 101/118 (85.59%), Postives = 110/118 (93.22%), Query Frame = 0
Query:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSSA 118
            MAK PSKK+AKAPKKA D K KK KRTESY SYIYKVLKQVHP+TGISK+GMSIMNSFIND+FER+A EAG+L RY+KK+TLSSREIQT+VRLMLPGELAKHAVSEGTKAVTKFTSSA
Sbjct:   15 MAKTPSKKSAKAPKKAGD-KVKKGKRTESYSSYIYKVLKQVHPETGISKKGMSIMNSFINDIFERLAGEAGRLARYSKKATLSSREIQTSVRLMLPGELAKHAVSEGTKAVTKFTSSA 131          
BLAST of jgi.p|Trimin1|348325 vs. uniprot
Match: B7FWR8_PHATC (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FWR8_PHATC)

HSP 1 Score: 184 bits (467), Expect = 3.080e-58
Identity = 101/117 (86.32%), Postives = 109/117 (93.16%), Query Frame = 0
Query:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117
            MAK PSK++AKAPKKAA G K K KRTE+Y SYIYKVLKQVHPDTGISK+GMSIMNSFIND+FERIA+EAGKL  YNKK+TLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:    1 MAKTPSKQSAKAPKKAATGTKSK-KRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 116          
BLAST of jgi.p|Trimin1|348325 vs. uniprot
Match: A0A7R9ZTA9_9STRA (Histone H2B n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZTA9_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.290e-56
Identity = 97/115 (84.35%), Postives = 106/115 (92.17%), Query Frame = 0
Query:    3 KIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117
            K PSK++AKAPKKA+ G  K  KRTE+Y SYIYKVLKQVHPDTGISK+GMSIMNSFIND+FERIA+EAGKL  YNKK+TLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:   64 KTPSKQSAKAPKKASTGSSKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 178          
BLAST of jgi.p|Trimin1|348325 vs. uniprot
Match: H2B_OLILU (Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=H2B_OLILU)

HSP 1 Score: 180 bits (456), Expect = 1.370e-56
Identity = 98/116 (84.48%), Postives = 104/116 (89.66%), Query Frame = 0
Query:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTS 116
            MAK PSKKAAKAPKKA     K+ KR E+Y SYIYKVLKQVHPDTGISKRGMSIMNSFIND+FER+A EA +L RYNK+STLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTS
Sbjct:    1 MAKTPSKKAAKAPKKAGS---KRNKRVETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTS 113          
BLAST of jgi.p|Trimin1|348325 vs. uniprot
Match: W7TEP7_9STRA (Histone h2b n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEP7_9STRA)

HSP 1 Score: 179 bits (455), Expect = 2.140e-56
Identity = 98/117 (83.76%), Postives = 106/117 (90.60%), Query Frame = 0
Query:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117
            MAK PSKK+AKAPKKA  G KKK  R ESYGSYIYKVLKQVHPDTGISKRG+SI+NSFI D+F+R+A+EAGKL RY KKSTLSSREIQTAVRL LPGELAKHAVSEGTKAVTK+TSS
Sbjct:    1 MAKTPSKKSAKAPKKAGKGTKKKT-RVESYGSYIYKVLKQVHPDTGISKRGVSILNSFIGDIFDRLATEAGKLARYTKKSTLSSREIQTAVRLTLPGELAKHAVSEGTKAVTKYTSS 116          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348325 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJ22_9STRA7.250e-71100.00Histone H2B n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A836CJT3_9STRA5.470e-69100.00Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R... [more]
D7FWI8_ECTSI7.890e-6188.89Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A485K2U0_9STRA1.750e-6087.39Histone H2B n=29 Tax=Stramenopiles TaxID=33634 Rep... [more]
A0A835YLA9_9STRA3.770e-5989.19Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A6U0X3U9_9STRA1.740e-5885.59Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 R... [more]
B7FWR8_PHATC3.080e-5886.32Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A7R9ZTA9_9STRA1.290e-5684.35Histone H2B n=1 Tax=Craspedostauros australis TaxI... [more]
H2B_OLILU1.370e-5684.48Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=830... [more]
W7TEP7_9STRA2.140e-5683.76Histone h2b n=4 Tax=Monodopsidaceae TaxID=425072 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 49..69
score: 69.52
coord: 88..101
score: 90.61
coord: 101..114
score: 92.65
coord: 71..88
score: 64.5
coord: 30..48
score: 83.41
IPR000558Histone H2BSMARTSM00427h2b3coord: 20..116
e-value: 1.7E-71
score: 253.5
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 5..117
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 85..107
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 9..93
e-value: 7.6E-19
score: 68.4
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..118
e-value: 1.2E-57
score: 195.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 7..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR23428:SF252HISTONE H2Bcoord: 5..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:1060970..1061326 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348325mRNA_6433Tribonema minus UTEX_B_3156 mRNAContig_22 1060670..1061633 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348325|estExt_Genemark1.C_Ctg_220121 ID=Trimin1|348325|estExt_Genemark1.C_Ctg_220121|Name=jgi.p|Trimin1|348325|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=119bp
MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKR
GMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELA
KHAVSEGTKAVTKFTSSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000558Histone_H2B
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold