Trimin1|348303|estExt_Genemark1.C_Ctg_220083 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348303
Unique NameTrimin1|348303|estExt_Genemark1.C_Ctg_220083
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length413
Homology
BLAST of jgi.p|Trimin1|348303 vs. uniprot
Match: A0A835Z8E5_9STRA (Yip1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8E5_9STRA)

HSP 1 Score: 768 bits (1983), Expect = 1.590e-279
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0
Query:    1 MNSSKGEEEKDKDAAVDSRVPSLEAIVVFFDLVHCEMSQHRDAYGLAATGSLSTDTPTLSPPQQPYSTAGTATPPWHGGHVDAAVVNXXXXXXXXXXXXXXXXXXXXXXXVTDSPAPPPHIGGXXXXRMGSPSTPQQAPQQAASVRGSLCGCFTVEYYKPYFNVDTGDVYKRWLGSMLFCRRQNGFVELMGENPDAYGPFWNATTLVFLVAVTTNLSSWLAFNGDQWYVFVRNRYRIPQYDFQKVVTCSAIVYGFGAVVPLLVWAAFRQLDVKLSLIHVLCTHGYGQAVFLPAALICAVPNGMFSTPSSWNQWIHFRDHMRLPHRISSDDTWRARRGCTALYAGVRDAAVVTLATCAVALGVAAVMSTLFLLRTLTPPVMEHNPTWAMIIVGVLVAEQVTFAMLLKFLFYYQ 412
            MNSSKGEEEKDKDAAVDSRVPSLEAIVVFFDLVHCEMSQHRDAYGLAATGSLSTDTPTLSPPQQPYSTAGTATPPWHGGHVDAAVVNXXXXXXXXXXXXXXXXXXXXXXXVTDSPAPPPHIGGXXXXRMGSPSTPQQAPQQAASVRGSLCGCFTVEYYKPYFNVDTGDVYKRWLGSMLFCRRQNGFVELMGENPDAYGPFWNATTLVFLVAVTTNLSSWLAFNGDQWYVFVRNRYRIPQYDFQKVVTCSAIVYGFGAVVPLLVWAAFRQLDVKLSLIHVLCTHGYGQAVFLPAALICAVPNGMFSTPSSWNQWIHFRDHMRLPHRISSDDTWRARRGCTALYAGVRDAAVVTLATCAVALGVAAVMSTLFLLRTLTPPVMEHNPTWAMIIVGVLVAEQVTFAMLLKFLFYYQ
Sbjct:    1 MNSSKGEEEKDKDAAVDSRVPSLEAIVVFFDLVHCEMSQHRDAYGLAATGSLSTDTPTLSPPQQPYSTAGTATPPWHGGHVDAAVVNXXXXXXXXXXXXXXXXXXXXXXXVTDSPAPPPHIGGXXXXRMGSPSTPQQAPQQAASVRGSLCGCFTVEYYKPYFNVDTGDVYKRWLGSMLFCRRQNGFVELMGENPDAYGPFWNATTLVFLVAVTTNLSSWLAFNGDQWYVFVRNRYRIPQYDFQKVVTCSAIVYGFGAVVPLLVWAAFRQLDVKLSLIHVLCTHGYGQAVFLPAALICAVPNGMFSTPSSWNQWIHFRDHMRLPHRISSDDTWRARRGCTALYAGVRDAAVVTLATCAVALGVAAVMSTLFLLRTLTPPVMEHNPTWAMIIVGVLVAEQVTFAMLLKFLFYYQ 412          
BLAST of jgi.p|Trimin1|348303 vs. uniprot
Match: A0A7S0SX75_9STRA (Protein YIPF (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SX75_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.740e-40
Identity = 67/161 (41.61%), Postives = 105/161 (65.22%), Query Frame = 0
Query:  149 LCGCFTVEYYKPYFNVDTGDVYKRWLGSMLFCRRQNGFVELMGENPDAYGPFWNATTLVFLVAVTTN----LSSWLAFNGDQWYVFVRNRYRIPQYDFQKVVTCSAIVYGFGAVVPLLVWAAFRQLDVKLSLIHVLCTHGYGQAVFLPAALICAVPNGMFS 305
             CGC ++ YY+P+F+VDT D+ KR   ++ +CRR+  F++++ + PDAYGPFW +TTLVF +AVT++    LSSW+A  G  W            YDFQ +++ S+++YGF + VP LVW   +Q D  + LI ++C +GY   +F+PA+L+C  P+ + S
Sbjct:   55 FCGCLSISYYQPFFDVDTTDIIKRLSLAVFYCRRETNFIDIISDKPDAYGPFWISTTLVFTLAVTSHIRGWLSSWMA--GTTWV-----------YDFQSIISASSLIYGFASFVPFLVWIILKQYDGNVKLITMICVYGYSLFMFIPASLLCLFPSEVVS 202          
BLAST of jgi.p|Trimin1|348303 vs. uniprot
Match: D7FY12_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY12_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 2.110e-39
Identity = 91/261 (34.87%), Postives = 131/261 (50.19%), Query Frame = 0
Query:  150 CGCFTVEYYKPYFNVDTGDVYKRWLGSMLFCRRQNGFVELMGENPDAYGPFWNATTLVFLVAVTTNLSSWLAFNGDQWYVFVRNRYRIPQYDFQKVVTCSAIVYGFGAVVPLLVWAAFRQLDVKLSLIHVLCTHGYGQAVFLPAALICAVPNGMFSTPSSWNQWIHFRDHMRLPHRISSDDTWRARRGCTALYAGVRDAAVVTLATCAVALGVAAVMSTLFLLRTLTPPVMEHNPTWAMIIVGVLVAEQVTFAMLLKFLFY 410
            CGC ++ +Y+ +F VDT DV +RWL S+L  RR+ GF++L+ +NPDAYGPFWN+T+L+FL+A TTNLS                      YD   +V  + IVYGF A  PL VW    Q+D+ + L+ + C +GY    +LPA L+CA+P                     +P+                          +TL    VAL  A  +S +FLLR LTP ++E N   A  ++  L   QV F +++KF F+
Sbjct:   59 CGCLSLAFYQQFFRVDTKDVTERWLHSILSWRRETGFLDLVADNPDAYGPFWNSTSLIFLIAFTTNLSE-------------------GGYDLNTLVVSTWIVYGFAACAPLAVWLVLNQMDLPVPLVKLGCMYGYSLGPYLPAILVCALP---------------------VPY--------------------------MTL----VALSAAGTLSVVFLLRALTPVLLERNVAMASPVMAGLGVLQVIFTLVIKFAFF 249          
BLAST of jgi.p|Trimin1|348303 vs. uniprot
Match: W7TJY7_9STRA (Protein YIPF n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJY7_9STRA)

HSP 1 Score: 147 bits (370), Expect = 7.150e-38
Identity = 65/158 (41.14%), Postives = 99/158 (62.66%), Query Frame = 0
Query:  147 GSLCGCFTVEYYKPYFNVDTGDVYKRWLGSMLFCRRQNGFVELMGENPDAYGPFWNATTLVFLVAVTTNLSSWLAFNGDQWYVFVRNRYRIPQYDFQKVVTCSAIVYGFGAVVPLLVWAAFRQLDVKLSLIHVLCTHGYGQAVFLPAALICAVPNGMF 304
            G LC C ++ YY+PYF+VDT  V  R   ++   ++++ F++L+G NPDAYGPFW AT+L+F++AV +N+SS+  F G +   +         YDF  VVTC+  +YGF A++PLL+WAA R + + L LI  +  +GY    F+P  L+  +P   F
Sbjct:   49 GGLCSCLSIRYYQPYFDVDTQHVVDRIKYALFPFKKESTFIQLLGPNPDAYGPFWVATSLIFVIAVVSNVSSYFQFVGTEGSAWT--------YDFAAVVTCATTIYGFAAIIPLLIWAALRYMQLPLPLIQTVAIYGYSLVAFVPCTLLNFIPAPAF 198          
BLAST of jgi.p|Trimin1|348303 vs. uniprot
Match: A0A7S2W6P0_9STRA (Protein YIPF n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6P0_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.560e-36
Identity = 70/166 (42.17%), Postives = 107/166 (64.46%), Query Frame = 0
Query:  136 QQAPQQAASVRGSLCGCFTVEYYKPYFNVDTGDVYKRWLGSMLFCRRQNGFVELMGENPDAYGPFWNATTLVFLVAVTTNLSSWLAFNGDQWYVFVRNRYRIPQYDFQKVVTCSAIVYGFGAVVPLLVWAAFRQ-LDVKLSLIHVLCTHGYGQAVFLPAALICAVP 300
            + A Q + +  G +CGCF+V YY+PYF+VDT  V +R L +  F + +  F+ L+ ++PDAYGPFW ATTL+F++AVT NL+S    N    Y           YDF+ V +C ++VYG+ A +P+ +WAAF+  L V+++L+++LC  GY   +F+P AL+  VP
Sbjct:   37 EAADQGSMAKPGGMCGCFSVAYYRPYFDVDTDRVKERLLSTFTFYKPEPTFLTLIKDSPDAYGPFWTATTLIFVIAVTANLTS----NAKTGY----------NYDFELVTSCMSLVYGYLAFLPVTMWAAFKYILGVQVALMNLLCLFGYSLFLFIPFALLALVP 188          
BLAST of jgi.p|Trimin1|348303 vs. uniprot
Match: F0W111_9STRA (Protein YIPF n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W111_9STRA)

HSP 1 Score: 139 bits (351), Expect = 4.580e-35
Identity = 63/163 (38.65%), Postives = 102/163 (62.58%), Query Frame = 0
Query:  140 QQAASVRGSLCGCFTVEYYKPYFNVDTGDVYKRWLGSMLFCRRQNGFVELMGENPDAYGPFWNATTLVFLVAVTTNLSSWLAFNGD--QWYVFVRNRYRIPQYDFQKVVTCSAIVYGFGAVVPLLVWAAFRQLDVKLSLIHVLCTHGYGQAVFLPAALICAVP 300
            +++A     +CGCFT+ +Y+PYF+VDT DV +R L ++L  ++   F E++G  PDAYGPFW +TTL+F++A  +N + +L + GD  +W            YDF ++ T   +V GF   VP+L W A R   V LSL +++C +GY   +++PA+++C +P
Sbjct:   48 KESAQSVNKICGCFTLAFYQPYFDVDTRDVQQRMLRAILPLKKNPHFTEIIGTCPDAYGPFWLSTTLIFMLASCSNGAGYLDYQGDKGEW-----------TYDFSRLATAYTLVAGFVLGVPILTWGAVRYFGVALSLTYLICLYGYSTTLYIPASILCMLP 199          
BLAST of jgi.p|Trimin1|348303 vs. uniprot
Match: A0A7S2UYF6_9STRA (Protein YIPF n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYF6_9STRA)

HSP 1 Score: 140 bits (353), Expect = 6.480e-35
Identity = 64/154 (41.56%), Postives = 93/154 (60.39%), Query Frame = 0
Query:  150 CGCFTVEYYKPYFNVDTGDVYKRWLGSMLFCRRQNGFVELMGENPDAYGPFWNATTLVFLVAVTTNLSSWLAFNGDQWYVFVRNRYRIPQYDFQKVVTCSAIVYGFGAVVPLLVWAAFRQLDVKLSLIHVLCTHGYGQAVFLPAALICAVPNGM 303
            CGC +V +Y+ Y +VDT DV  R   S+LFC+    F+EL+G+ PDAYGPFW ATTLVF ++V TN+  W     D           I +YD   VV+ ++I+Y +   +PLL + A +QL V +S I +   +GY   V++P AL+C +PN +
Sbjct:  101 CGCLSVRFYQKYVDVDTDDVVNRLKSSVLFCKPPQNFLELLGDRPDAYGPFWVATTLVFFMSVATNIFQWAHHTSDS----------IWEYDMNAVVSIASIIYAWLVFIPLLTYIACQQLGVSISFIQLFSVYGYSLFVYVPLALLCLIPNNL 244          
BLAST of jgi.p|Trimin1|348303 vs. uniprot
Match: K3WPR2_GLOUD (Protein YIPF n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPR2_GLOUD)

HSP 1 Score: 139 bits (349), Expect = 1.040e-34
Identity = 62/157 (39.49%), Postives = 100/157 (63.69%), Query Frame = 0
Query:  146 RGSLCGCFTVEYYKPYFNVDTGDVYKRWLGSMLFCRRQNGFVELMGENPDAYGPFWNATTLVFLVAVTTNLSSWLAFNGD--QWYVFVRNRYRIPQYDFQKVVTCSAIVYGFGAVVPLLVWAAFRQLDVKLSLIHVLCTHGYGQAVFLPAALICAVP 300
            RG +CGCFT+ YYKPYF+VDT DV +R   ++L  ++   F E++  +PDAYGPFW +TTLVF +A  +N++S++ F+GD  +W            YDF ++ +   +V  F   +P+L+W   + + V ++L  +LC +GY  A+F+PA+++C  P
Sbjct:   60 RGGMCGCFTLAYYKPYFDVDTADVQQRLTRALLPFKKNPTFAEMIAPSPDAYGPFWLSTTLVFCLASCSNVASYMDFDGDISEW-----------SYDFSRLASAYTLVETFLFGLPVLLWLLGKYMSVPMTLSFLLCLYGYSMAIFIPASIVCMAP 205          
BLAST of jgi.p|Trimin1|348303 vs. uniprot
Match: A0A7S1XRC2_9STRA (Protein YIPF (Fragment) n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRC2_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.400e-34
Identity = 72/183 (39.34%), Postives = 103/183 (56.28%), Query Frame = 0
Query:  139 PQQAASVRGSLCGCFTVEYYKPYFNVDTGDVYKRWLGSMLFCRRQNGFVELMGENPDAYGPFWNATTLVFLVAVTTNLSSWLAFNG-------DQWYVFVRNRYRIPQYDFQKVVTCSAIVYGFGAVVPLLVWAAFRQLDVKLSLIHVLCTHGYGQAVFLPAALICAVPNGMFSTPSSWNQWI 314
            P Q+A+  G +C C +V+YY+P F+VDT DV  R L S+L   +  GF++++ ++PD YGPFW +TTL+F +AV  NL SW  F         D W           +YDF+ VVTC  +VYG+    P+ +W   R L V++ L  V C +GY    F+PAAL+C VP       + W  W+
Sbjct:   46 PNQSAADPG-ICSCLSVKYYQPLFDVDTKDVVDRMLMSVL-PHKATGFLQMIKDSPDFYGPFWVSTTLLFTIAVVGNLLSWTKFQQLQGSSAEDSW-----------EYDFEMVVTCMCVVYGWAVGAPVALWFTLRYLLVQIKLATVGCAYGYSLVPFVPAALLCGVP-------ADWVSWL 208          
BLAST of jgi.p|Trimin1|348303 vs. uniprot
Match: A0A024FZC4_9STRA (Protein YIPF n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZC4_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.790e-33
Identity = 61/154 (39.61%), Postives = 95/154 (61.69%), Query Frame = 0
Query:  149 LCGCFTVEYYKPYFNVDTGDVYKRWLGSMLFCRRQNGFVELMGENPDAYGPFWNATTLVFLVAVTTNLSSWLAFNGD--QWYVFVRNRYRIPQYDFQKVVTCSAIVYGFGAVVPLLVWAAFRQLDVKLSLIHVLCTHGYGQAVFLPAALICAVP 300
            +CGCFT+ YY+PYF+VDT DV +R   ++L  ++   F E++G +PDAYGPFW +TTL+F++A  +N + +L F GD  +W            YDF ++ T   +V  F   VP+L W A R     LSL +++C +GY   +++PA+ +C +P
Sbjct:   57 ICGCFTLAYYQPYFDVDTSDVQQRISRAILPLKKNPHFTEIIGTSPDAYGPFWLSTTLIFMLASCSNGAGYLDFQGDKDEW-----------TYDFSRLATAYTLVVSFVLGVPVLTWGAVRYFGATLSLTYLVCLYGYSTTLYIPASFLCMLP 199          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348303 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8E5_9STRA1.590e-279100.00Yip1 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S0SX75_9STRA1.740e-4041.61Protein YIPF (Fragment) n=1 Tax=Chromulina nebulos... [more]
D7FY12_ECTSI2.110e-3934.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TJY7_9STRA7.150e-3841.14Protein YIPF n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A7S2W6P0_9STRA1.560e-3642.17Protein YIPF n=1 Tax=Rhizochromulina marina TaxID=... [more]
F0W111_9STRA4.580e-3538.65Protein YIPF n=1 Tax=Albugo laibachii Nc14 TaxID=8... [more]
A0A7S2UYF6_9STRA6.480e-3541.56Protein YIPF n=1 Tax=Fibrocapsa japonica TaxID=946... [more]
K3WPR2_GLOUD1.040e-3439.49Protein YIPF n=1 Tax=Globisporangium ultimum (stra... [more]
A0A7S1XRC2_9STRA1.400e-3439.34Protein YIPF (Fragment) n=3 Tax=Phaeomonas parva T... [more]
A0A024FZC4_9STRA1.790e-3339.61Protein YIPF n=1 Tax=Albugo candida TaxID=65357 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006977Yip1 domainPFAMPF04893Yip1coord: 184..390
e-value: 3.2E-7
score: 30.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..110
NoneNo IPR availablePANTHERPTHR12822:SF2PROTEIN YIPFcoord: 131..305
coord: 358..410
IPR039765Protein Yip5/YIPF1/YIPF2PANTHERPTHR12822UNCHARACTERIZEDcoord: 131..305
coord: 358..410

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:714154..725763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348303mRNA_6395Tribonema minus UTEX_B_3156 mRNAContig_22 714154..726040 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348303|estExt_Genemark1.C_Ctg_220083 ID=Trimin1|348303|estExt_Genemark1.C_Ctg_220083|Name=jgi.p|Trimin1|348303|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=413bp
MNSSKGEEEKDKDAAVDSRVPSLEAIVVFFDLVHCEMSQHRDAYGLAATG
SLSTDTPTLSPPQQPYSTAGTATPPWHGGHVDAAVVNTGTPTGSPPRQPY
STAGTSTPPWVTDSPAPPPHIGGGGGGRMGSPSTPQQAPQQAASVRGSLC
GCFTVEYYKPYFNVDTGDVYKRWLGSMLFCRRQNGFVELMGENPDAYGPF
WNATTLVFLVAVTTNLSSWLAFNGDQWYVFVRNRYRIPQYDFQKVVTCSA
IVYGFGAVVPLLVWAAFRQLDVKLSLIHVLCTHGYGQAVFLPAALICAVP
NGMFSTPSSWNQWIHFRDHMRLPHRISSDDTWRARRGCTALYAGVRDAAV
VTLATCAVALGVAAVMSTLFLLRTLTPPVMEHNPTWAMIIVGVLVAEQVT
FAMLLKFLFYYQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006977Yip1_dom
IPR039765Yip5/YIPF1/YIPF2