Trimin1|348285|estExt_Genemark1.C_Ctg_220053 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348285
Unique NameTrimin1|348285|estExt_Genemark1.C_Ctg_220053
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length179
Homology
BLAST of jgi.p|Trimin1|348285 vs. uniprot
Match: A0A835Z5B1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B1_9STRA)

HSP 1 Score: 362 bits (928), Expect = 1.470e-126
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
Query:    1 MVANLLLCGMEVDRVTSAVKQLRSVDCGALPPEACGAHVEHFWGHETAPGRLVAIQRMAQVAGLAWLDDATHLCLHPEHGPWVSFRAVVLVDVPGPPGPPPAMRCPAAEGDLARAAAAMSEALGKMGSYATTSREAADAFLEARLSYSLGSASVYPPDMIEYHYHNDLGFLETAPSAK 178
            MVANLLLCGMEVDRVTSAVKQLRSVDCGALPPEACGAHVEHFWGHETAPGRLVAIQRMAQVAGLAWLDDATHLCLHPEHGPWVSFRAVVLVDVPGPPGPPPAMRCPAAEGDLARAAAAMSEALGKMGSYATTSREAADAFLEARLSYSLGSASVYPPDMIEYHYHNDLGFLETAPSAK
Sbjct:    1 MVANLLLCGMEVDRVTSAVKQLRSVDCGALPPEACGAHVEHFWGHETAPGRLVAIQRMAQVAGLAWLDDATHLCLHPEHGPWVSFRAVVLVDVPGPPGPPPAMRCPAAEGDLARAAAAMSEALGKMGSYATTSREAADAFLEARLSYSLGSASVYPPDMIEYHYHNDLGFLETAPSAK 178          
BLAST of jgi.p|Trimin1|348285 vs. uniprot
Match: A0A836CM74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM74_9STRA)

HSP 1 Score: 147 bits (371), Expect = 8.190e-38
Identity = 93/170 (54.71%), Postives = 111/170 (65.29%), Query Frame = 0
Query:   10 MEVDRVTSAVKQLRSVDCGALPPEACGAHVEHFWGHETAPGRLVAIQRMAQVAGLAWLDDATHLCLHPEHGPWVSFRAVVLVDVPGPPGPPPAMRCPAA-EGDLARAAAAMSEALGKMGSYA-----------------TTSREAADAFLEARLSYSLGSASVYPPDMIE 161
            MEV  V++AV++LR+ D  ALP EA  A V+ +W HETA GRLVAIQRMA V+GLAWL D THLCLHPE GPW++ RAVVLVDVPGP GPP         E ++ARAAAAM  AL  +  YA                  TSREA +AFL AR ++ LG+A  YP D+IE
Sbjct:  552 MEV--VSAAVRELRASD--ALPAEARAAEVKLYWAHETARGRLVAIQRMAHVSGLAWLHDKTHLCLHPEVGPWLALRAVVLVDVPGPSGPPXXXXXXXXXEAEVARAAAAMDAAL-VVTYYAYPCCRCCVAPDVIKRSGATSREAREAFLAARAAFDLGAAYRYPADVIE 716          
BLAST of jgi.p|Trimin1|348285 vs. uniprot
Match: A0A388KSQ2_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KSQ2_CHABU)

HSP 1 Score: 91.3 bits (225), Expect = 3.820e-18
Identity = 65/184 (35.33%), Postives = 93/184 (50.54%), Query Frame = 0
Query:    5 LLLCGMEVDRVTSAVKQLRSVDCGALPPEACGAHVEHFWGHETAPGRLVAIQRMAQVAGLAWLDDATHLCLHPEHGPWVSFRAVVLVDVPGPPGPPPAMRCPAAEGDLARAAAAMSEALGKMGSYAT-----------TSREAADA-----FLEARLSYSLGSASVYPPDMIEYHYHNDLGFLE 172
            L +CG   DR+T  +   RS        E      E FWGH+T PGRL+AIQRMA +AG+A+LD  +HLCLHP+ GPW S RAV++ D+  P   P  ++ P     + +   A++ AL K+ + AT           TSR+         ++E R          Y  D I+YHY ++   L+
Sbjct:  475 LCVCGR--DRLTEELAIQRS--------EKRSGKCEIFWGHDTRPGRLIAIQRMAHIAGVAFLDQVSHLCLHPQFGPWFSLRAVLVFDLEPPTIRPRELKNPLTPAVIHKVQDALNVAL-KLAAGATHDDCGGGQRKATSRKVHGTGKWRRWVEVRDQIHPDHPMRYSEDQIDYHYTSNRDLLK 647          
BLAST of jgi.p|Trimin1|348285 vs. uniprot
Match: A0A7S0IIY4_MICPS (Hypothetical protein n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0IIY4_MICPS)

HSP 1 Score: 84.7 bits (208), Expect = 1.420e-16
Identity = 54/132 (40.91%), Postives = 72/132 (54.55%), Query Frame = 0
Query:   42 FWGHETAPGRLVAIQRMAQVAGLAWLDDATHLCLHPEHGPWVSFRAVVLVDVPGPPG--------PPPAMRCPAAEGDLARAAAAMSEALGKMGSYATTSREAADAFLEARLSYSLGSASVYPPDMIEYHYH 165
            F+ HET PGRLVA+QRMA VAG+A LD+ +HL +HP  GPW++FRAVV++D    PG        P P  R P+A    AR   A   AL    +    S      ++  R +   G  + YP D + YHY+
Sbjct:  127 FYAHETKPGRLVAVQRMAHVAGVAHLDERSHLSIHPTLGPWLAFRAVVVLDDAHGPGDGQKPRPPPNPLARDPSAR---ARVDEAFDAALDGYEAPGGPSEGQWRLWVAVRDAVEPGHPARYPEDQVAYHYN 255          
BLAST of jgi.p|Trimin1|348285 vs. uniprot
Match: A0A7R9TZK5_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TZK5_9VIRI)

HSP 1 Score: 82.8 bits (203), Expect = 1.860e-16
Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = 0
Query:   42 FWGHETAPGRLVAIQRMAQVAGLAWLDDATHLCLHPEHGPWVSFRAVVLVDV-PGPPG-----PPPAMRCPAAEGDLARAAAAMSEALGKMGSYATTSREAADAFLEARLSYSLGSASVYPPDMIEYHYHNDLGFLETAPSAK 178
            ++ HETA GRLVA+QR+A V+G   LD+A+HLC+HP+HG W + RA+VL+D  P   G     PP  M  P A   +ARA+ A   ++ K  ++      +   +L  R + S G  + YP   I Y Y  D   L+   +AK
Sbjct:   45 YFAHETASGRLVAMQRLASVSGAYHLDEASHLCVHPKHGQWCALRALVLLDADPAEVGVDAASPPEQMALPEA---VARASGANRASVLK-NAFDAAMAGSDGGWLALREAVSPGHPARYPDGAIAYFYRRDSAALQRCINAK 183          
BLAST of jgi.p|Trimin1|348285 vs. uniprot
Match: F2U8E4_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U8E4_SALR5)

HSP 1 Score: 82.0 bits (201), Expect = 1.530e-15
Identity = 51/138 (36.96%), Postives = 79/138 (57.25%), Query Frame = 0
Query:   43 WGHETAPGRLVAIQRMAQVAGLAWLDDATHLCLHPEHGPWVSFRAVVLVDVPGPPGP----PPAMRCPAAEGDLARAAAAMSEALGKMGSYATTSREAADAF---LEARLSYSLGSASVYPPDMIEYHYHNDLGFLET 173
            + ++  PGR+++ QR+A  +GLA+L  A HLC+HPE+GPW+S R VV++D P   G      P   C +AE        AM+EA  K  + A + R  A+A+   L  R + ++G+   Y    + YHY +DLG +E+
Sbjct:  132 FSYDLTPGRVLSFQRLAHESGLAYLHPACHLCVHPEYGPWISLRVVVVLDAPPLQGQHDKEAPMNPCSSAE------ETAMTEA--KAVALAASERHDAEAWKLWLAMRDACTVGAQHRYTEPQVAYHYTHDLGIIES 261          
BLAST of jgi.p|Trimin1|348285 vs. uniprot
Match: A0A1Y2HGY6_9FUNG (Cyanocobalamin reductase (cyanide-eliminating) n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HGY6_9FUNG)

HSP 1 Score: 80.9 bits (198), Expect = 2.050e-15
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 0
Query:   32 PEACGAHVEHFWGHETAPGRLVAIQRMAQVAGLAWLDDATHLCLHPEHGPWVSFRAVVLVDVPGP 96
            P A    V H+W  E  PGR+VAIQRM QVAG+A+LD A HL +H E+GPW++ R  +++D+PGP
Sbjct:  112 PAAAQHDVRHYW--EMTPGRMVAIQRMCQVAGVAYLDQACHLNVHTEYGPWLALRYAIVIDLPGP 174          
BLAST of jgi.p|Trimin1|348285 vs. uniprot
Match: A0A539E112_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E112_9ACTN)

HSP 1 Score: 79.7 bits (195), Expect = 4.610e-15
Identity = 56/144 (38.89%), Postives = 78/144 (54.17%), Query Frame = 0
Query:   35 CGAHVEHFWGHETAPGRLVAIQRMAQVAGLAWLDDATHLCLHPEHGPWVSFRAVVLVDVPGPPGPPPAMRCPAAEGDLARAAAAM-SEALGKMGSYATTS-REAADAFLEARLSYSLGSASVYPPDMIEYHYHNDLGFLETAPS 176
            C   ++  + HE+ P R +AIQR+A VAGLAWL  + HLC+HP  GPW++ RA +++D+P PP   P     AA  D A A A + +EAL       + S R +   +L  R +  +G    Y  D IEYHY      + T PS
Sbjct:   89 CTELIDVRYAHESPP-RRIAIQRLAHVAGLAWLSPS-HLCIHPTFGPWIALRAAIVLDMPAPPARQPL----AAPCDCASACAPLLAEALAAAERVDSASVRSSWRRWLAMRDACPVGRRHRYDDDQIEYHY------IGTTPS 220          
BLAST of jgi.p|Trimin1|348285 vs. uniprot
Match: A0A1Y5IE75_OSTTA (Uncharacterized protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IE75_OSTTA)

HSP 1 Score: 79.3 bits (194), Expect = 4.810e-15
Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 0
Query:   42 FWGHETAPGRLVAIQRMAQVAGLAWLDDATHLCLHPEHGPWVSFRAVVLVDVPGPPGP--PPAMRCPAAEGDLARAAAAMSEALGKMGSYATTSREAADAFLEARLSYSLGSA---SVYPPDMIEYHY 164
            +W  +  PG++VAIQR+A  A +A+ DDATH  LHP HGPW +FRA V+ D     G   P ++ CP + G L RA  A   A+ + G+ A    E    +L AR++   G       Y  D I +HY
Sbjct:   64 YWATDLEPGKVVAIQRLAATANVAYFDDATHQSLHPTHGPWCAFRAAVVFDDVRTEGEIEPGSLACPVSAGALRRAKEAFDVAVERYGN-AANKDEMHKLWLAARIAMEDGEKFRECRYYDDQILWHY 190          
BLAST of jgi.p|Trimin1|348285 vs. uniprot
Match: A0A090M1D4_OSTTA (Unnamed product n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M1D4_OSTTA)

HSP 1 Score: 79.3 bits (194), Expect = 1.240e-14
Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 0
Query:   42 FWGHETAPGRLVAIQRMAQVAGLAWLDDATHLCLHPEHGPWVSFRAVVLVDVPGPPGP--PPAMRCPAAEGDLARAAAAMSEALGKMGSYATTSREAADAFLEARLSYSLGSA---SVYPPDMIEYHY 164
            +W  +  PG++VAIQR+A  A +A+ DDATH  LHP HGPW +FRA V+ D     G   P ++ CP + G L RA  A   A+ + G+ A    E    +L AR++   G       Y  D I +HY
Sbjct:  122 YWATDLEPGKVVAIQRLAATANVAYFDDATHQSLHPTHGPWCAFRAAVVFDDVRTEGEIEPGSLACPVSAGALRRAKEAFDVAVERYGN-AANKDEMHKLWLAARIAMEDGEKFRECRYYDDQILWHY 248          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348285 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5B1_9STRA1.470e-126100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CM74_9STRA8.190e-3854.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A388KSQ2_CHABU3.820e-1835.33Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A7S0IIY4_MICPS1.420e-1640.91Hypothetical protein n=2 Tax=Micromonas TaxID=3883... [more]
A0A7R9TZK5_9VIRI1.860e-1638.46Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
F2U8E4_SALR51.530e-1536.96Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A1Y2HGY6_9FUNG2.050e-1553.85Cyanocobalamin reductase (cyanide-eliminating) n=1... [more]
A0A539E112_9ACTN4.610e-1538.89Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A1Y5IE75_OSTTA4.810e-1539.06Uncharacterized protein n=1 Tax=Ostreococcus tauri... [more]
A0A090M1D4_OSTTA1.240e-1439.06Unnamed product n=1 Tax=Ostreococcus tauri TaxID=7... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:414145..417141 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348285mRNA_6365Tribonema minus UTEX_B_3156 mRNAContig_22 414145..417286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348285|estExt_Genemark1.C_Ctg_220053 ID=Trimin1|348285|estExt_Genemark1.C_Ctg_220053|Name=jgi.p|Trimin1|348285|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=179bp
MVANLLLCGMEVDRVTSAVKQLRSVDCGALPPEACGAHVEHFWGHETAPG
RLVAIQRMAQVAGLAWLDDATHLCLHPEHGPWVSFRAVVLVDVPGPPGPP
PAMRCPAAEGDLARAAAAMSEALGKMGSYATTSREAADAFLEARLSYSLG
SASVYPPDMIEYHYHNDLGFLETAPSAK*
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