Trimin1|348278|estExt_Genemark1.C_Ctg_220040 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348278
Unique NameTrimin1|348278|estExt_Genemark1.C_Ctg_220040
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length340
Homology
BLAST of jgi.p|Trimin1|348278 vs. uniprot
Match: A0A836CHD9_9STRA (CAAX protease self-immunity-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD9_9STRA)

HSP 1 Score: 640 bits (1651), Expect = 2.160e-231
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0
Query:    1 MAAQPKRDDHGGAPDPRTMALSGVNNGLVRTLVQGEVAVLAVAAVIATFLNINPVAGFAPSLEGISSAIAYAIPIFVGSVVLERSNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDVPALLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFVEVHFRATSRIGVAAAGVPPQPAAASQASGMAARVLQDKRVQDVIKRYGLPAPFVKNAIGVFGMLDLDKNGTLDRRELQLGVRTFGRFTNDEQLDAIYKRADLNQDGEISFDEFLKLLTDAVLQQQRLAAERK 339
            MAAQPKRDDHGGAPDPRTMALSGVNNGLVRTLVQGEVAVLAVAAVIATFLNINPVAGFAPSLEGISSAIAYAIPIFVGSVVLERSNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDVPALLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFVEVHFRATSRIGVAAAGVPPQPAAASQASGMAARVLQDKRVQDVIKRYGLPAPFVKNAIGVFGMLDLDKNGTLDRRELQLGVRTFGRFTNDEQLDAIYKRADLNQDGEISFDEFLKLLTDAVLQQQRLAAERK
Sbjct:    1 MAAQPKRDDHGGAPDPRTMALSGVNNGLVRTLVQGEVAVLAVAAVIATFLNINPVAGFAPSLEGISSAIAYAIPIFVGSVVLERSNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDVPALLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFVEVHFRATSRIGVAAAGVPPQPAAASQASGMAARVLQDKRVQDVIKRYGLPAPFVKNAIGVFGMLDLDKNGTLDRRELQLGVRTFGRFTNDEQLDAIYKRADLNQDGEISFDEFLKLLTDAVLQQQRLAAERK 339          
BLAST of jgi.p|Trimin1|348278 vs. uniprot
Match: D8LFE3_ECTSI (Abortive infection protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE3_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 7.660e-85
Identity = 146/305 (47.87%), Postives = 207/305 (67.87%), Query Frame = 0
Query:   21 LSGVNNGLVRTLVQGEVAVLAVAAVIATFLNINPVAGFAPSLEGISSAIAYAIPIFVGSVVLERSNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDVPALLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFVEVHFRATSRIGVAAAGVPPQPAAASQASGMAARVLQDKR-VQDVIKRYGLPAPFVKNAIGVFGMLDLDKNGTLDRRELQLGVRTFGRFTNDEQLDAIYKRADLNQDGEISFDEFLKLL 324
            L G N  L+R LVQGEVAV   AA +A    +NP AG   S   + +    A+PIF+ SV+LE+S +  F++ID+DT+L+VVQ+FGAKR+   +   + ++AA+AG  EE+LFRG+IQ GLS  IG +PAL+++S+LFGLAH+PVPGASS  EA YG  FG LY+ +GGNL  PI++H LYD+ TF+EVH RAT+++     G  PQ               Q+KR V  V+K++ L   FV  + G+F  LDLDKNG +D++ELQLG+RTFG+F + E+   I + ADL+++  ++FDE+++LL
Sbjct:   82 LQGPNLELMRILVQGEVAVGTAAAGLAFLTKVNPFAGTLFSWAALKAGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAANAGFFEEVLFRGVIQQGLSTLIGGIPALVISSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNLLVPIIAHVLYDMLTFLEVHQRATAQLETTLRGDLPQKE-------------QEKRNVATVVKKFNLSKKFVDMSYGIFQQLDLDKNGVIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLL 373          
BLAST of jgi.p|Trimin1|348278 vs. uniprot
Match: A0A7R9TU82_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TU82_9VIRI)

HSP 1 Score: 100 bits (249), Expect = 2.730e-20
Identity = 80/273 (29.30%), Postives = 122/273 (44.69%), Query Frame = 0
Query:   67 SAIAYAIPIFVGSVVLERSNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYI----------GDVPALLVASLLFGLAH----NPVPGASSL-VEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFVEVHFRATSRIGVAAAGVPPQPAAASQASGMAARVLQDKRVQDVIKRYGLPAPFVKNAIGVFGMLDLDKNGTLDRRELQLGVRTFGRFTNDEQLDAIYKRADLNQDGEISFDEFLKLL 324
            +A A A+ +      LE S+      I R+T++FV+ +FG +     +   A  +    G+ EEI FRG++   + N +          G V   LV+S  FGLAH        GA+ + +EA YG    + Y+ +G NL API++H +YD    V  H R   RI  A AG       A  A G    V ++          G     V      + ++D D+NG +D  EL++ +  FG      + D + +       G++SFD F KLL
Sbjct:   78 AAAAGAVVLVALGRALESSSNPTLANIARETEIFVLALFGERARPLAVGAVALPLVLFTGLTEEIAFRGVMFPSVVNAVPPAAGGAGVPGLVAGALVSSFFFGLAHWGGDRTTEGAALVALEASYGLVLAATYVLSGYNLLAPIIAHAVYDWEAIVFPHLRVCDRIAYARAG-------AGGAYGEEGIVTRE--ALRTAAAAGQSMADVMRVRAAYLLIDTDQNGAVDAEELRVALAAFGIKATAAESDKLARAWSTGGTGQLSFDSFYKLL 341          
BLAST of jgi.p|Trimin1|348278 vs. uniprot
Match: A0A7S0AJM5_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AJM5_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.410e-20
Identity = 67/188 (35.64%), Postives = 104/188 (55.32%), Query Frame = 0
Query:   32 LVQGEVAVLAVAAVIATFL---NINPVAGFAPSLEGISSAIAYAIPIFVGSVVLE--RSNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDVPALLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFVEVHFRAT 214
            LV G+ A++AVA + AT L   N    +GFA S + + S     IP+FV + VL+     +   +++ + TQ  V+ + G KR     L  A  + A+AGI EE+LFRG++Q  L+   GD  A++ +S++FGL H   P  ++L   +  F FG LY+ +  NL  PI+ H LYD+   +  H+  T
Sbjct:  162 LVAGQSALVAVAVLFATILGTSNYGLGSGFAISSQALQSGAIATIPLFVLAFVLDFVEKGVPALQDVTKATQRSVLALLGRKRKPLIALGTALALGAAAGIGEEMLFRGVLQEALAMQFGDSIAVISSSIVFGLLHAVTPLYAALAS-LASFFFGFLYLKSS-NLAVPIICHGLYDVGALLWAHWTVT 347          
BLAST of jgi.p|Trimin1|348278 vs. uniprot
Match: A0A7S3UQH1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQH1_HETAK)

HSP 1 Score: 96.7 bits (239), Expect = 3.730e-19
Identity = 59/197 (29.95%), Postives = 106/197 (53.81%), Query Frame = 0
Query:   14 PDPRTMALSGVNNGLVRTLVQGEVAVLAVAAVIATFLNINPVAGFAPSLEGISSAIAYAIPIFVGSVVLER--SNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDVPALLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFVE 208
            PDP        ++ L  T  Q    V+A+A  I + + ++ ++    S + +   +A ++P+   +  L+    + +   +I+  TQ   + +FG + +   +   + +++ +AG+ EE+LFRG++QNG+   +G    L VAS++FGL HN  P   +L+  IYGF FG +Y+ATG NL  P++ H  YDL   + 
Sbjct:  102 PDPAKYPDWNPSSILFATGAQSLFVVVAIA--IGSVIGVDALSSLNFSSDAVVKGLAVSVPMLALNFGLKFVFGSAEWLLKIESSTQTSAMILFGVQNNYVKVFVGSLLLSIAAGVGEEVLFRGLLQNGVGIKLGQSIGLAVASIIFGLLHNVTP-VYALIATIYGFYFGFIYLATG-NLAIPMIGHAFYDLVALIH 294          
BLAST of jgi.p|Trimin1|348278 vs. uniprot
Match: A0A7H4GRI0_9GAMM (CPBP family intramembrane metalloprotease n=1 Tax=Wenzhouxiangella sp. AB-CW3 TaxID=2771012 RepID=A0A7H4GRI0_9GAMM)

HSP 1 Score: 90.9 bits (224), Expect = 4.130e-18
Identity = 64/182 (35.16%), Postives = 94/182 (51.65%), Query Frame = 0
Query:   34 QGEVAVLAVAAVIATFLNINPVAGFAPSLEGISSAIAYAIPIFVGSVVLERSNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDVPALLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFVEVHFRATS 215
            QG + VLAVA  +     + P A    SL  ++ A+   +P+ +  + +   N    +EI       +  +F      S +L     +AA AGI EE+LFRG IQ+GL   +G +PALL+A++LFGL H  V  A  ++  + G   G +Y+ATG NL  PIL H LYD        F+ T+
Sbjct:   12 QGGLVVLAVA--LCLLFGLTPWASMEWSLPALALAVTLTVPLLLPLLFMRHLNWAWAREIHAVVNQLIKLLFRRAPRGSVVL-----VAALAGIGEELLFRGFIQDGLDLLLGPIPALLIAAVLFGLVH-AVTRAYFIIATLMGAYLGWIYLATG-NLLVPILIHALYDWIAIRYYLFKLTT 184          
BLAST of jgi.p|Trimin1|348278 vs. uniprot
Match: A0A8J5XK67_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XK67_DIALT)

HSP 1 Score: 90.1 bits (222), Expect = 7.200e-17
Identity = 60/165 (36.36%), Postives = 98/165 (59.39%), Query Frame = 0
Query:   70 AYAIPI-FVGSVVLER-SNIKLFKEIDRDTQLFVVQIFGAKRSLSN---ILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDV--PALLV-------ASLLFGLAHN----PVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFVEVHFRATSR 216
            A A+P+  + S+ LER   ++  +EI   +Q     +FGA+RSL +   +L A+ +++A+AG+AEE++FRG +Q GLS  +  V  PA L+        S+LFGL H+    P    ++ + ++Y   FG+L+ ATG N+  P+L+HF  DL +FV+ +F    R
Sbjct:  124 ALALPLQVITSLPLERIPGLRAIEEITTVSQFLCYLLFGARRSLGHMCKVLAASTLISAAAGVAEELVFRGTLQTGLSTLLAAVGAPAALLPYLSIGATSVLFGLLHSYSSSPAYAIAAFIASLY---FGALFAATG-NIVVPVLAHFTVDLVSFVQGYFEVVYR 284          
BLAST of jgi.p|Trimin1|348278 vs. uniprot
Match: A0A3M1L0Q2_9DELT (CPBP family intramembrane metalloprotease n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1L0Q2_9DELT)

HSP 1 Score: 86.7 bits (213), Expect = 1.440e-16
Identity = 66/174 (37.93%), Postives = 98/174 (56.32%), Query Frame = 0
Query:   29 VRTLVQGEVAVLAVAAVIATFLNINPVAGFAPSLEGISSAIAYAIPIFVGSVVLERSNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDVPALLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYD 202
            V   V+G + VLAVA  +AT     P +    +L G  +  A A+P+ V   +L R+       I  + +  ++ +F   R  S +  AA  +AA AG  EE+LFRG++Q GL++ +GD  AL+VAS+LF LAH P+    S+V  + G   G L++  G NL API++H LYD
Sbjct:   12 VSVAVEGGLGVLAVAVGVAT--GYPPWSTLTWNLSGALTGAAAAVPMLVFFALLWRTRRSPVASIRNELERRILPLF---RECSLVELAAVCIAAGAG--EELLFRGLVQGGLTSTLGDGGALVVASVLFALAH-PITTLYSIVAGLLGTYLGWLWLWCG-NLLAPIVAHSLYD 176          
BLAST of jgi.p|Trimin1|348278 vs. uniprot
Match: UPI00147533BC (CPBP family intramembrane metalloprotease n=1 Tax=Tautonia rosea TaxID=2728037 RepID=UPI00147533BC)

HSP 1 Score: 85.9 bits (211), Expect = 3.430e-16
Identity = 56/158 (35.44%), Postives = 85/158 (53.80%), Query Frame = 0
Query:   50 LNINPVAGFAPSLEGISSAIAYAIPIFVGSVVLERSNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDVPALLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFV 207
            L I+P     P+L+G    I  A+P+FV  VV +R +      I R  + F++      R         A++AA+AG+ EE LFRG++Q  L  ++G  PAL +AS++FGL H   P   +++  + G   G L + TG NL  PI++H LYDL   +
Sbjct:   26 LGIDPWRTLEPNLKGWVIGIGSAVPMFVLLVVCDRDDFPAMIRIRRLLEQFLLPPLRGCRWWEL-----ALIAAAAGLGEETLFRGLLQEALLGWLGVWPALAIASIIFGLLHALTP-TYAILATVIGAYLGMLSLMTG-NLLVPIVAHGLYDLIALI 176          
BLAST of jgi.p|Trimin1|348278 vs. uniprot
Match: A0A5Q4G8J5_9GAMM (CPBP family intramembrane metalloprotease n=1 Tax=Wenzhouxiangellaceae bacterium TaxID=2448046 RepID=A0A5Q4G8J5_9GAMM)

HSP 1 Score: 82.8 bits (203), Expect = 6.230e-15
Identity = 57/138 (41.30%), Postives = 78/138 (56.52%), Query Frame = 0
Query:   73 IPIFVGSVVLERSNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDVPALLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYD-LATFVEV 209
            +P+ +G V L     K  +E+ R  +  VV +F   R    +L     +A +AGI EE+LFRG+IQ GL ++IG    LL ASLLFGL H  +  A  L+  + G   G LY+ TG NL   IL HFLYD +A ++ V
Sbjct:   67 LPLVLGLVALGWVRAKWIEELQRFMREVVVPMFAGARWWMLML-----VALAAGIGEELLFRGVIQAGLGDWIGPGFGLLAASLLFGLVH-AMSRAYFLLATLAGLYLGLLYLWTG-NLLVVILVHFLYDWIALYIYV 197          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348278 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CHD9_9STRA2.160e-231100.00CAAX protease self-immunity-domain-containing prot... [more]
D8LFE3_ECTSI7.660e-8547.87Abortive infection protein n=2 Tax=Ectocarpus TaxI... [more]
A0A7R9TU82_9VIRI2.730e-2029.30Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7S0AJM5_9STRA3.410e-2035.64Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S3UQH1_HETAK3.730e-1929.95Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7H4GRI0_9GAMM4.130e-1835.16CPBP family intramembrane metalloprotease n=1 Tax=... [more]
A0A8J5XK67_DIALT7.200e-1736.36Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A3M1L0Q2_9DELT1.440e-1637.93CPBP family intramembrane metalloprotease n=1 Tax=... [more]
UPI00147533BC3.430e-1635.44CPBP family intramembrane metalloprotease n=1 Tax=... [more]
A0A5Q4G8J5_9GAMM6.230e-1541.30CPBP family intramembrane metalloprotease n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 263..291
e-value: 7.5
score: 10.7
coord: 299..327
e-value: 0.038
score: 23.1
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 267..324
e-value: 2.9E-10
score: 40.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 259..294
score: 8.962221
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 295..330
score: 13.564962
IPR002048EF-hand domainCDDcd00051EFhcoord: 267..325
e-value: 6.35685E-16
score: 69.4989
NoneNo IPR availableGENE3D1.10.238.10coord: 220..337
e-value: 4.1E-17
score: 64.7
NoneNo IPR availablePANTHERPTHR40041CAAX AMINO TERMINAL PROTEASE FAMILY PROTEINcoord: 113..212
IPR003675Type II CAAX prenyl endopeptidase Rce1-likePFAMPF02517Rce1-likecoord: 113..203
e-value: 4.4E-17
score: 62.2
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 308..320
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 272..284
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 261..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:326217..336725 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348278mRNA_6351Tribonema minus UTEX_B_3156 mRNAContig_22 326064..337605 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348278|estExt_Genemark1.C_Ctg_220040 ID=Trimin1|348278|estExt_Genemark1.C_Ctg_220040|Name=jgi.p|Trimin1|348278|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=340bp
MAAQPKRDDHGGAPDPRTMALSGVNNGLVRTLVQGEVAVLAVAAVIATFL
NINPVAGFAPSLEGISSAIAYAIPIFVGSVVLERSNIKLFKEIDRDTQLF
VVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDVPA
LLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFL
YDLATFVEVHFRATSRIGVAAAGVPPQPAAASQASGMAARVLQDKRVQDV
IKRYGLPAPFVKNAIGVFGMLDLDKNGTLDRRELQLGVRTFGRFTNDEQL
DAIYKRADLNQDGEISFDEFLKLLTDAVLQQQRLAAERK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR003675Rce1-like
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair