Trimin1|348261|estExt_Genemark1.C_Ctg_220001 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348261
Unique NameTrimin1|348261|estExt_Genemark1.C_Ctg_220001
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length282
Homology
BLAST of jgi.p|Trimin1|348261 vs. uniprot
Match: A0A835Z1K9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1K9_9STRA)

HSP 1 Score: 431 bits (1107), Expect = 1.910e-150
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
Query:    1 MSLTAPRPPMLSSANTTFVRLAAAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARADADSDADSYSVASYMRSSHAGGARXXXXXXXXXXXXXXXXXXXXXXXXXXSSADSNGATGTLTGAATPAAAAARGID 281
            MSLTAPRPPMLSSANTTFVRLAAAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARADADSDADSYSVASYMRSSHAGGARXXXXXXXXXXXXXXXXXXXXXXXXXXSSADSNGATGTLTGAATPAAAAARGID
Sbjct:    1 MSLTAPRPPMLSSANTTFVRLAAAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARADADSDADSYSVASYMRSSHAGGARXXXXXXXXXXXXXXXXXXXXXXXXXXSSADSNGATGTLTGAATPAAAAARGID 281          
BLAST of jgi.p|Trimin1|348261 vs. uniprot
Match: A0A835YZZ0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZZ0_9STRA)

HSP 1 Score: 334 bits (857), Expect = 3.950e-104
Identity = 197/222 (88.74%), Postives = 202/222 (90.99%), Query Frame = 0
Query:    6 PRPPMLSSANTTFVRLAAAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARADADSDADSYSVASYMRSSHAGGA 227
            PRPP L           AAQLPSPARSAMGAPAQALSGRAP SSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTY  AQAQLTQVHLEERTKAQALAA AQREHDRAQRE+AERRQQDMQR W+EEMD RAAL QGAMDAREHAPDAQ+RT+D+APSQ RADADSDADSYSVASYMRSSHAGGA
Sbjct:  344 PRPPAL----------LAAQLPSPARSAMGAPAQALSGRAPPSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYARAQAQLTQVHLEERTKAQALAAVAQREHDRAQREIAERRQQDMQRHWQEEMDARAALPQGAMDAREHAPDAQQRTLDQAPSQTRADADSDADSYSVASYMRSSHAGGA 555          
BLAST of jgi.p|Trimin1|348261 vs. uniprot
Match: A0A836CPY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPY3_9STRA)

HSP 1 Score: 314 bits (804), Expect = 3.050e-96
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
Query:   23 AAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARA 204
            AAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARA
Sbjct:  373 AAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARA 554          
BLAST of jgi.p|Trimin1|348261 vs. uniprot
Match: A0A835Z3T0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3T0_9STRA)

HSP 1 Score: 314 bits (804), Expect = 6.540e-95
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
Query:   23 AAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARA 204
            AAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARA
Sbjct:  413 AAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARA 594          
BLAST of jgi.p|Trimin1|348261 vs. uniprot
Match: A0A835YK66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK66_9STRA)

HSP 1 Score: 314 bits (804), Expect = 1.010e-94
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
Query:   23 AAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARA 204
            AAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARA
Sbjct:  413 AAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARA 594          
BLAST of jgi.p|Trimin1|348261 vs. uniprot
Match: A0A835YX93_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX93_9STRA)

HSP 1 Score: 314 bits (804), Expect = 1.040e-94
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
Query:   23 AAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARA 204
            AAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARA
Sbjct:  712 AAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARA 893          
BLAST of jgi.p|Trimin1|348261 vs. uniprot
Match: A0A835YT69_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT69_9STRA)

HSP 1 Score: 314 bits (804), Expect = 3.060e-94
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
Query:   23 AAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARA 204
            AAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARA
Sbjct:  372 AAQLPSPARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQARA 553          
BLAST of jgi.p|Trimin1|348261 vs. uniprot
Match: A0A836CJF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJF1_9STRA)

HSP 1 Score: 211 bits (537), Expect = 2.100e-58
Identity = 140/210 (66.67%), Postives = 160/210 (76.19%), Query Frame = 0
Query:   24 AQLPS--PARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPSQ---ARADADSDADSYSVASYMRSSHAGGAR 228
            A LPS  PARS   APAQ LSGRA SSS+AAT PA+AP PQPDRYRSM+A PEP    CG   +  S+RS  LD+LKPDARAQLDGAARQA+Q   Y + Q  + Q  LEE+T+A+A+AAAAQREHDRAQ+ELAERRQQ   RRW+EEMD RAAL QGAMDARE    AQ+R +++A SQ   ARADAD DADSYS  S+ RSSHAGGAR
Sbjct:  759 AALPSAAPARSVASAPAQDLSGRASSSSIAATSPAYAPTPQPDRYRSMVASPEPP---CGGGFDSPSRRSSLLDMLKPDARAQLDGAARQANQPHVYAITQTLIAQARLEEQTRAEAVAAAAQREHDRAQQELAERRQQ---RRWQEEMDARAALWQGAMDARERTLHAQQRALEQAQSQLSRARADADYDADSYSAPSHTRSSHAGGAR 962          
BLAST of jgi.p|Trimin1|348261 vs. uniprot
Match: A0A836C8T7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8T7_9STRA)

HSP 1 Score: 207 bits (528), Expect = 3.480e-57
Identity = 135/203 (66.50%), Postives = 153/203 (75.37%), Query Frame = 0
Query:   29 PARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPS---QARADADSDADSYSVASYMRSSHAGGAR 228
            PARS   APAQ LSGRA SSS+AAT+P HA   QPDRY SM+A PEP   LCG +    S+RS  LD+LKPDARAQLDGAARQASQ   Y + Q  LTQ  LEE+T+A+ALAAAAQREHDRAQ++LAERRQQD+Q RW EEMD RAALRQGAMDARE   DAQ+R +++A S   +   DAD DADSYS     RSSHAGGAR
Sbjct:  334 PARSVASAPAQDLSGRASSSSIAATIPVHAHTSQPDRYPSMVAAPEP---LCGGDFASASRRSSLLDMLKPDARAQLDGAARQASQPHVYAITQTLLTQARLEEQTRAEALAAAAQREHDRAQQQLAERRQQDIQHRWEEEMDARAALRQGAMDARERDLDAQQRALEQAQSXLSRXXXDADYDADSYSAPG--RSSHAGGAR 531          
BLAST of jgi.p|Trimin1|348261 vs. uniprot
Match: A0A836CR21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR21_9STRA)

HSP 1 Score: 205 bits (521), Expect = 3.040e-56
Identity = 133/203 (65.52%), Postives = 153/203 (75.37%), Query Frame = 0
Query:   29 PARSAMGAPAQALSGRAPSSSLAATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPDARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRAQRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPS---QARADADSDADSYSVASYMRSSHAGGAR 228
            P+RS   APAQ LSGRA SSS+AAT+P HA   QPDRY SM+A PEP   LCG +    S+RS  LD+LKPDARAQLDGAARQASQ   Y + Q  LTQ  LEE+T+A+ALAAAAQREHDRAQ++LAERRQQD+Q RW EE+D RAALRQGAMDARE   DAQ+R +++A S   +   DAD DADSYS     RSSHAGGAR
Sbjct:  800 PSRSVASAPAQDLSGRASSSSIAATIPVHAHTSQPDRYPSMVAAPEP---LCGGDFASASRRSSLLDMLKPDARAQLDGAARQASQPHVYAITQTLLTQARLEEQTRAEALAAAAQREHDRAQQQLAERRQQDIQHRWEEEIDARAALRQGAMDARERDLDAQQRALEQAQSXLSRXXXDADYDADSYSAPG--RSSHAGGAR 997          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348261 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A835Z1K9_9STRA1.910e-150100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZZ0_9STRA3.950e-10488.74Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CPY3_9STRA3.050e-96100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z3T0_9STRA6.540e-95100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YK66_9STRA1.010e-94100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YX93_9STRA1.040e-94100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YT69_9STRA3.060e-94100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CJF1_9STRA2.100e-5866.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C8T7_9STRA3.480e-5766.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CR21_9STRA3.040e-5665.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 133..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:188..1217 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348261mRNA_6313Tribonema minus UTEX_B_3156 mRNAContig_22 17..1386 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348261|estExt_Genemark1.C_Ctg_220001 ID=Trimin1|348261|estExt_Genemark1.C_Ctg_220001|Name=jgi.p|Trimin1|348261|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=282bp
MSLTAPRPPMLSSANTTFVRLAAAQLPSPARSAMGAPAQALSGRAPSSSL
AATVPAHAPLPQPDRYRSMLAEPEPQVALCGAELNLVSQRSGALDVLKPD
ARAQLDGAARQASQSRTYVLAQAQLTQVHLEERTKAQALAAAAQREHDRA
QRELAERRQQDMQRRWREEMDVRAALRQGAMDAREHAPDAQERTMDEAPS
QARADADSDADSYSVASYMRSSHAGGARGGGGAAAAAAAAGAAAAEAAAA
AGGDSSADSNGATGTLTGAATPAAAAARGID*
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