Trimin1|348212|estExt_Genemark1.C_Ctg_210011 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348212
Unique NameTrimin1|348212|estExt_Genemark1.C_Ctg_210011
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length182
Homology
BLAST of jgi.p|Trimin1|348212 vs. uniprot
Match: A0A836CJB9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJB9_9STRA)

HSP 1 Score: 366 bits (940), Expect = 2.730e-128
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
Query:    1 MSGSYQNIDSQKGTPSFQQSYFPTPDFPSVQAVVAGVVEGQGDDERLMETYSLARSIKVLSMIDAILLTFNAVFFWGPLFFIVMLALAWGPACGYYSAKHYHIHSARGYLVYYVIKVLTDVGRLFVAGFWSIIPLAIDSYIGRCVYVYCKRLTEASPSELEGLQSSPNPAWESAQGYFYVF 181
            MSGSYQNIDSQKGTPSFQQSYFPTPDFPSVQAVVAGVVEGQGDDERLMETYSLARSIKVLSMIDAILLTFNAVFFWGPLFFIVMLALAWGPACGYYSAKHYHIHSARGYLVYYVIKVLTDVGRLFVAGFWSIIPLAIDSYIGRCVYVYCKRLTEASPSELEGLQSSPNPAWESAQGYFYVF
Sbjct:    1 MSGSYQNIDSQKGTPSFQQSYFPTPDFPSVQAVVAGVVEGQGDDERLMETYSLARSIKVLSMIDAILLTFNAVFFWGPLFFIVMLALAWGPACGYYSAKHYHIHSARGYLVYYVIKVLTDVGRLFVAGFWSIIPLAIDSYIGRCVYVYCKRLTEASPSELEGLQSSPNPAWESAQGYFYVF 181          
BLAST of jgi.p|Trimin1|348212 vs. uniprot
Match: A0A6V1TFA5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TFA5_HETAK)

HSP 1 Score: 99.0 bits (245), Expect = 2.600e-22
Identity = 52/141 (36.88%), Postives = 85/141 (60.28%), Query Frame = 0
Query:   42 GDDER-LMETYSLARSIKVLSMIDAILLTFNAVFFWGPLFFIVMLALAWGPACGYYSAKHYHIHSARGYLVYYVIKVLTDVGRLFVAGFWSIIPLAIDSYIGRCVYVYCKRLTEASPSELEGLQSSPNPAWESAQGYFYVF 181
            GD ER L+ETYSL R ++V+++ID ++L F+ + F  P+FF++M    WGP  GY  + ++       Y +YYV+K+  D+  +    +W +  L ID +I R VY+    L  A+P+ELE L++ P+  W  A+ +F +F
Sbjct:   96 GDHERRLLETYSLGRGVRVIALIDGMILLFDCLLF--PVFFVLM----WGPLAGYLGSSYFRFSFVTCYFLYYVLKMAADIIFILYGAWWFLAVLVIDLWIARWVYMLAALLWVANPAELEALRA-PSHMWSRARQFFIIF 229          
BLAST of jgi.p|Trimin1|348212 vs. uniprot
Match: D8LQC7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC7_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.320e-6
Identity = 39/133 (29.32%), Postives = 69/133 (51.88%), Query Frame = 0
Query:   45 ERLMETYSLARSIKVLSMIDAILLTFNAVFFWGPLFFIVMLALAWGPACGYYSAKHYHIHSARGYLVYYVIKVLTDVGRLFVAGF-WSIIPLAI--DSYIGRCVYVYCKRLTEASPSELEGLQSSPNPAWESA 174
            E LM  +  +R ++VL+++DAI++        G   F  ++ + WGP  GY  A ++ + +A  +L YY +++  D+G +   G  W ++ + +  D      VY +   L   S +E+E L+  PN AW SA
Sbjct:   89 ESLMACHRYSRVVRVLAILDAIIVLC------GASAFTPLILMIWGPIAGY-LASNFRLRAAFTFLFYYGLRISWDIGWILSGGIKWVVVWVFLFTDVAASGLVYFFVVLLCRCSTAEVEHLRD-PNTAWASA 213          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348212 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CJB9_9STRA2.730e-128100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1TFA5_HETAK2.600e-2236.88Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LQC7_ECTSI1.320e-629.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_21contigContig_21:104832..108673 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348212mRNA_7128Tribonema minus UTEX_B_3156 mRNAContig_21 104769..108673 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348212|estExt_Genemark1.C_Ctg_210011 ID=Trimin1|348212|estExt_Genemark1.C_Ctg_210011|Name=jgi.p|Trimin1|348212|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=182bp
MSGSYQNIDSQKGTPSFQQSYFPTPDFPSVQAVVAGVVEGQGDDERLMET
YSLARSIKVLSMIDAILLTFNAVFFWGPLFFIVMLALAWGPACGYYSAKH
YHIHSARGYLVYYVIKVLTDVGRLFVAGFWSIIPLAIDSYIGRCVYVYCK
RLTEASPSELEGLQSSPNPAWESAQGYFYVF*
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