Trimin1|348137|estExt_Genemark1.C_Ctg_200052 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348137
Unique NameTrimin1|348137|estExt_Genemark1.C_Ctg_200052
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length143
Homology
BLAST of jgi.p|Trimin1|348137 vs. uniprot
Match: A0A835Z9N6_9STRA (Prefoldin subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N6_9STRA)

HSP 1 Score: 250 bits (639), Expect = 1.150e-83
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query:    1 MLRREEEVDVEVRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLEA 142
            MLRREEEVDVEVRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLEA
Sbjct:    1 MLRREEEVDVEVRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLEA 142          
BLAST of jgi.p|Trimin1|348137 vs. uniprot
Match: A0A7S2V806_9STRA (Prefoldin subunit 4 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V806_9STRA)

HSP 1 Score: 135 bits (339), Expect = 3.550e-38
Identity = 75/141 (53.19%), Postives = 97/141 (68.79%), Query Frame = 0
Query:    1 MLRREEEVDVEVRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLE 141
            M+ ++++ DV VRWEDQQ+INEFGRLNTRL+EL+ + K  K  LD LDDA+TELMT DG  V L LG+ F+   E++ATEY +K+Q                E  Q  +D LS EE +IL+RQ ELK++LYARFG+SINLE
Sbjct:    3 MISKDQDDDVLVRWEDQQKINEFGRLNTRLHELQVELKLHKENLDKLDDASTELMTEDGSGVKLLLGEVFIECNEDYATEYLDKEQ----------------EKTQVLVDQLSEEEHTILERQKELKEVLYARFGSSINLE 127          
BLAST of jgi.p|Trimin1|348137 vs. uniprot
Match: A0A7S3YAJ8_HETAK (Prefoldin subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAJ8_HETAK)

HSP 1 Score: 133 bits (334), Expect = 1.920e-37
Identity = 73/134 (54.48%), Postives = 89/134 (66.42%), Query Frame = 0
Query:    9 DVEVRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLEA 142
            + EVR EDQ QINEFG+LN RLNE+R D KALK + D LDDA TELMTGDG  V + +G++F+   EE+ATEYCEK+Q                E +Q  LD    EE +IL+RQ ELK +LY RFG +INLEA
Sbjct:   10 EAEVRREDQLQINEFGQLNNRLNEIREDCKALKDKFDRLDDANTELMTGDGDDVKIFMGESFIQCSEEYATEYCEKEQ----------------EKLQGMLDTFKEEETAILERQKELKVVLYGRFGDAINLEA 127          
BLAST of jgi.p|Trimin1|348137 vs. uniprot
Match: D7FYJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ4_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 1.030e-35
Identity = 75/129 (58.14%), Postives = 88/129 (68.22%), Query Frame = 0
Query:   14 WEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLEA 142
            +EDQQ+INEFGRLNTRL E+R D   +K  LD LDDATTELMTG+G  V L LGD+F+  EEEFAT+YCE++Q                E  Q+KLD L  EE +IL RQ  LKK LYARFG+SI LEA
Sbjct:    8 YEDQQKINEFGRLNTRLLEIRDDKSHIKDILDKLDDATTELMTGEGDSVMLMLGDSFMECEEEFATDYCERQQ----------------EKRQSKLDDLVDEEKTILLRQGVLKKELYARFGSSIQLEA 120          
BLAST of jgi.p|Trimin1|348137 vs. uniprot
Match: A0A7S0B128_9STRA (Prefoldin subunit 4 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B128_9STRA)

HSP 1 Score: 127 bits (318), Expect = 6.530e-35
Identity = 75/141 (53.19%), Postives = 90/141 (63.83%), Query Frame = 0
Query:    1 MLRREEEVDVEVRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLE 141
            ML REEE + EVR EDQ+ IN+FGRLN RL E+RG+  A+K +L+ +DDA+TELM G G KV L LGDAF    EE ATE+CE +                 E  QA +D L  EE  IL+ Q +LKKILY RFG SINLE
Sbjct:    9 MLEREEESENEVRREDQENINKFGRLNARLYEVRGERDAIKKKLERIDDASTELMMGSGDKVMLMLGDAFFESSEEDATEFCEAE----------------VEKFQAVVDNLEEEESEILEEQEKLKKILYTRFGKSINLE 133          
BLAST of jgi.p|Trimin1|348137 vs. uniprot
Match: W7TPN2_9STRA (Prefoldin subunit 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPN2_9STRA)

HSP 1 Score: 127 bits (318), Expect = 8.770e-35
Identity = 73/137 (53.28%), Postives = 90/137 (65.69%), Query Frame = 0
Query:    5 EEEVDVEVRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLE 141
            +E  DVEVR EDQ+ INEFGRLN +  EL  D   LK +L+ LDDA TELM G GG V L LG+AF+ V E++ATE+CE+KQ                E +QAK++ L RE+  I  RQ ELKK+LY RFG+SINLE
Sbjct:   23 DEAPDVEVRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQ----------------EQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLE 143          
BLAST of jgi.p|Trimin1|348137 vs. uniprot
Match: A0A7S0SVI5_9STRA (Prefoldin subunit 4 n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SVI5_9STRA)

HSP 1 Score: 120 bits (300), Expect = 3.100e-32
Identity = 69/133 (51.88%), Postives = 87/133 (65.41%), Query Frame = 0
Query:    9 DVEVRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLE 141
            DVEVR+EDQ++INEFG+LN RL E+R + K  K +++ LDDATTEL     GKV L +G+ F+ V EEFA EYCEKK                   +Q++++ L  EE SI+ RQ ELKKILY RFG SINLE
Sbjct:   14 DVEVRYEDQEKINEFGKLNNRLLEIRAELKQSKTDIETLDDATTELAMVGKGKVMLLIGENFMEVTEEFAEEYCEKKTK----------------KLQSRIEQLENEELSIVSRQDELKKILYGRFGDSINLE 130          
BLAST of jgi.p|Trimin1|348137 vs. uniprot
Match: B5YND4_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YND4_THAPS)

HSP 1 Score: 117 bits (294), Expect = 2.750e-31
Identity = 70/141 (49.65%), Postives = 90/141 (63.83%), Query Frame = 0
Query:    1 MLRREEEVDVEVRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLE 141
            +L +EEE D EVR EDQ +INEFG+LN RL E+R +   LK  L+ +DDA+TELM G+G KV L+LG+A     E+ ATE+CE +                 E  QA LD L +EE  I+++QA LKK+LY RFG SINLE
Sbjct:    8 ILAKEEENDAEVRREDQDKINEFGQLNARLYEVRSEIARLKKLLEKIDDASTELMMGNGDKVMLRLGEAMFEATEDEATEFCEAEM----------------EKHQAVLDDLDKEEADIVEKQAALKKVLYGRFGNSINLE 132          
BLAST of jgi.p|Trimin1|348137 vs. uniprot
Match: G4ZPB8_PHYSP (Prefoldin subunit 4 n=8 Tax=Phytophthora TaxID=4783 RepID=G4ZPB8_PHYSP)

HSP 1 Score: 117 bits (293), Expect = 3.170e-31
Identity = 69/141 (48.94%), Postives = 87/141 (61.70%), Query Frame = 0
Query:    1 MLRREEEVDVEVRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLE 141
            ML +++EV+ +VR EDQ +INEFGR N  L+E+R   KALK +LD LDDA T+LM G+G  V L +G++FV   E+FA EY EK+   A AE                L  L  EE  +  RQA LKK+LY RFG SINLE
Sbjct:    1 MLAQQQEVEADVRKEDQLRINEFGRNNASLHEIREQKKALKDKLDTLDDANTDLMMGEGDNVQLFIGESFVEASEDFAQEYLEKRVEEANAE----------------LKKLQAEESKLEARQAALKKVLYGRFGQSINLE 125          
BLAST of jgi.p|Trimin1|348137 vs. uniprot
Match: A0A6V0ZXN8_9STRA (Prefoldin subunit 4 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V0ZXN8_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.530e-30
Identity = 72/142 (50.70%), Postives = 85/142 (59.86%), Query Frame = 0
Query:    1 MLRREEEVDVEVRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLEA 142
            +L +EEE D EVR EDQ  INEFGRLN RL+E++     LK  L+ +DDA+TELM GDG  V L LG A     E+ ATEYCE +                 E  Q  LD LS EE  I++RQ  LKK+LY RFG SINLEA
Sbjct:    8 ILSKEEENDNEVRREDQDAINEFGRLNARLDEVKRQVDNLKKTLEKIDDASTELMMGDGDAVMLSLGGAMFEATEDEATEYCEAE----------------VERQQKILDKLSEEEAGIVERQETLKKLLYGRFGKSINLEA 133          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348137 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z9N6_9STRA1.150e-83100.00Prefoldin subunit 4 n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2V806_9STRA3.550e-3853.19Prefoldin subunit 4 n=1 Tax=Fibrocapsa japonica Ta... [more]
A0A7S3YAJ8_HETAK1.920e-3754.48Prefoldin subunit 4 n=1 Tax=Heterosigma akashiwo T... [more]
D7FYJ4_ECTSI1.030e-3558.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0B128_9STRA6.530e-3553.19Prefoldin subunit 4 n=1 Tax=Minutocellus polymorph... [more]
W7TPN2_9STRA8.770e-3553.28Prefoldin subunit 4 n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S0SVI5_9STRA3.100e-3251.88Prefoldin subunit 4 n=2 Tax=Chromulina nebulosa Ta... [more]
B5YND4_THAPS2.750e-3149.65Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
G4ZPB8_PHYSP3.170e-3148.94Prefoldin subunit 4 n=8 Tax=Phytophthora TaxID=478... [more]
A0A6V0ZXN8_9STRA1.530e-3050.70Prefoldin subunit 4 n=1 Tax=Skeletonema marinoi Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..50
IPR016661Prefoldin, subunit 4PIRSFPIRSF016477Prefoldin_4coord: 87..142
e-value: 4.4E-10
score: 37.7
coord: 1..93
e-value: 1.3E-21
score: 74.9
IPR016661Prefoldin, subunit 4PANTHERPTHR21100PREFOLDIN SUBUNIT 4coord: 5..141
IPR002777Prefoldin beta-likePFAMPF01920Prefoldin_2coord: 17..88
e-value: 2.9E-7
score: 30.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_20contigContig_20:445685..448099 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348137mRNA_4089Tribonema minus UTEX_B_3156 mRNAContig_20 445639..448217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348137|estExt_Genemark1.C_Ctg_200052 ID=Trimin1|348137|estExt_Genemark1.C_Ctg_200052|Name=jgi.p|Trimin1|348137|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=143bp
MLRREEEVDVEVRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDA
TTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESATQYCEK
KQEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016661PFDN4
IPR002777PFD_beta-like