Trimin1|348025|estExt_Genemark1.C_Ctg_180072 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348025
Unique NameTrimin1|348025|estExt_Genemark1.C_Ctg_180072
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1244
Homology
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BLAST of jgi.p|Trimin1|348025 vs. uniprot
Match: A0A835ZBQ0_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBQ0_9STRA)

HSP 1 Score: 2168 bits (5617), Expect = 0.000e+0
Identity = 1243/1243 (100.00%), Postives = 1243/1243 (100.00%), Query Frame = 0 
Query:    1 MSDSEAIAVGKALRAVDERSLEAWLHWVRQGGTAVCSDIWREAWDSFRPRTNADLTFGPNDPAHNEVVFLRDAGSGSAANEAQALAVQVPVVELGADGLPAVQSETGDVAAARTVAAALRESDVLRLGKCRVTGDAVVGSGGARAPPLWLRVAVVSVREECVVLARRCGEWGAPLAECDSAHGGLLEVPLARLAGAVVLRERGDSRSAAAAPPLPPPDFRTAAAAGCTVVAFALPLPSAEWGLAWLRAAAAEDCRLGGADSLAARAEGGALSAAAALQAEAARERXXXRDRALRDRADARVREARALLPRLSPARALRRDAWAAVGRALFAAEGGRRGRGALRAEWARWTEAAAAAVEAGQQFSAEGQRAXXXXXXQQRAGLPARPXXXXXXXXXXXXGGAAGAVAAADDCRAAWLRFRPRTSLDAPALVNLRAWVQSSRRPRPRAAPWRSGAGSSSVCDTFSDCMRANASDAAAAKLAEFSGAHLKGDSNRLAGGAPTATLSSALRGDALARAKQMVKELPERTRTVLQFLEPSSEPLQVPAVSMVRTPLSGPPAGPPSGFLMGEGLFPLPPGKGIGGXXXXXXXXGDRRGQKGLTLVPRDVVAEVRPGDWLLVTSGTGGYKGVWRQVVGLSVLQPAVMVRARGSRAYGAQSDGSPWQLPRRRTEAARGSAAXXXXXXXXXXXXXXXXXDARRARSGSDAWRPLRVGLEELWGAWVFRDDEPCASQDFNTDAPGARWSEPPPPRTGCVGLAFQLPVPDAAGAVDELRRWARSDAAEPEHTPRTTASGGDGISASRVPSDSKIQHNSAQHRDANSYLPSNTRRSXXXXXXXXXXXXXXXXXRALLLPAPMLRALERGVARLLVAWSGAGEARVELLSTEPPRADAGSSAAAAAAPLRSAWRAVYAGAAGACEVTGLRQCSTYTLRVRAAGRRVALLRACTLAAAPPRAPLLARWLPRGGGGAHERVAVIEMGCDCAAAAGRWVLRRRRLPMLSADLAADQQTALATARQWSAIGGDTSADAGPEASVNAAGGRVFEVYRGRKGEAAVGGLEGYRGGWSPALPVTVPQQLRARQSHPPSRAQHTSGRSGSAAEADGDAQAVVRALGPRLSAAQQRRVTAAFARVLRSGGASSSGSDCSAGSRLRSSSSSTERGSGSGXXXXXXXXXXXXXXXXGASGKRDARQNSRKGRLPRGWRRVHDGAGGAAFYVNDGAGVAQWTRPQAWQEEAVALDLGDAAAAMRFEHD 1243
            MSDSEAIAVGKALRAVDERSLEAWLHWVRQGGTAVCSDIWREAWDSFRPRTNADLTFGPNDPAHNEVVFLRDAGSGSAANEAQALAVQVPVVELGADGLPAVQSETGDVAAARTVAAALRESDVLRLGKCRVTGDAVVGSGGARAPPLWLRVAVVSVREECVVLARRCGEWGAPLAECDSAHGGLLEVPLARLAGAVVLRERGDSRSAAAAPPLPPPDFRTAAAAGCTVVAFALPLPSAEWGLAWLRAAAAEDCRLGGADSLAARAEGGALSAAAALQAEAARERXXXRDRALRDRADARVREARALLPRLSPARALRRDAWAAVGRALFAAEGGRRGRGALRAEWARWTEAAAAAVEAGQQFSAEGQRAXXXXXXQQRAGLPARPXXXXXXXXXXXXGGAAGAVAAADDCRAAWLRFRPRTSLDAPALVNLRAWVQSSRRPRPRAAPWRSGAGSSSVCDTFSDCMRANASDAAAAKLAEFSGAHLKGDSNRLAGGAPTATLSSALRGDALARAKQMVKELPERTRTVLQFLEPSSEPLQVPAVSMVRTPLSGPPAGPPSGFLMGEGLFPLPPGKGIGGXXXXXXXXGDRRGQKGLTLVPRDVVAEVRPGDWLLVTSGTGGYKGVWRQVVGLSVLQPAVMVRARGSRAYGAQSDGSPWQLPRRRTEAARGSAAXXXXXXXXXXXXXXXXXDARRARSGSDAWRPLRVGLEELWGAWVFRDDEPCASQDFNTDAPGARWSEPPPPRTGCVGLAFQLPVPDAAGAVDELRRWARSDAAEPEHTPRTTASGGDGISASRVPSDSKIQHNSAQHRDANSYLPSNTRRSXXXXXXXXXXXXXXXXXRALLLPAPMLRALERGVARLLVAWSGAGEARVELLSTEPPRADAGSSAAAAAAPLRSAWRAVYAGAAGACEVTGLRQCSTYTLRVRAAGRRVALLRACTLAAAPPRAPLLARWLPRGGGGAHERVAVIEMGCDCAAAAGRWVLRRRRLPMLSADLAADQQTALATARQWSAIGGDTSADAGPEASVNAAGGRVFEVYRGRKGEAAVGGLEGYRGGWSPALPVTVPQQLRARQSHPPSRAQHTSGRSGSAAEADGDAQAVVRALGPRLSAAQQRRVTAAFARVLRSGGASSSGSDCSAGSRLRSSSSSTERGSGSGXXXXXXXXXXXXXXXXGASGKRDARQNSRKGRLPRGWRRVHDGAGGAAFYVNDGAGVAQWTRPQAWQEEAVALDLGDAAAAMRFEHD
Sbjct:    1 MSDSEAIAVGKALRAVDERSLEAWLHWVRQGGTAVCSDIWREAWDSFRPRTNADLTFGPNDPAHNEVVFLRDAGSGSAANEAQALAVQVPVVELGADGLPAVQSETGDVAAARTVAAALRESDVLRLGKCRVTGDAVVGSGGARAPPLWLRVAVVSVREECVVLARRCGEWGAPLAECDSAHGGLLEVPLARLAGAVVLRERGDSRSAAAAPPLPPPDFRTAAAAGCTVVAFALPLPSAEWGLAWLRAAAAEDCRLGGADSLAARAEGGALSAAAALQAEAARERXXXRDRALRDRADARVREARALLPRLSPARALRRDAWAAVGRALFAAEGGRRGRGALRAEWARWTEAAAAAVEAGQQFSAEGQRAXXXXXXQQRAGLPARPXXXXXXXXXXXXGGAAGAVAAADDCRAAWLRFRPRTSLDAPALVNLRAWVQSSRRPRPRAAPWRSGAGSSSVCDTFSDCMRANASDAAAAKLAEFSGAHLKGDSNRLAGGAPTATLSSALRGDALARAKQMVKELPERTRTVLQFLEPSSEPLQVPAVSMVRTPLSGPPAGPPSGFLMGEGLFPLPPGKGIGGXXXXXXXXGDRRGQKGLTLVPRDVVAEVRPGDWLLVTSGTGGYKGVWRQVVGLSVLQPAVMVRARGSRAYGAQSDGSPWQLPRRRTEAARGSAAXXXXXXXXXXXXXXXXXDARRARSGSDAWRPLRVGLEELWGAWVFRDDEPCASQDFNTDAPGARWSEPPPPRTGCVGLAFQLPVPDAAGAVDELRRWARSDAAEPEHTPRTTASGGDGISASRVPSDSKIQHNSAQHRDANSYLPSNTRRSXXXXXXXXXXXXXXXXXRALLLPAPMLRALERGVARLLVAWSGAGEARVELLSTEPPRADAGSSAAAAAAPLRSAWRAVYAGAAGACEVTGLRQCSTYTLRVRAAGRRVALLRACTLAAAPPRAPLLARWLPRGGGGAHERVAVIEMGCDCAAAAGRWVLRRRRLPMLSADLAADQQTALATARQWSAIGGDTSADAGPEASVNAAGGRVFEVYRGRKGEAAVGGLEGYRGGWSPALPVTVPQQLRARQSHPPSRAQHTSGRSGSAAEADGDAQAVVRALGPRLSAAQQRRVTAAFARVLRSGGASSSGSDCSAGSRLRSSSSSTERGSGSGXXXXXXXXXXXXXXXXGASGKRDARQNSRKGRLPRGWRRVHDGAGGAAFYVNDGAGVAQWTRPQAWQEEAVALDLGDAAAAMRFEHD 1243
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348025 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZBQ0_9STRA0.000e+0100.00WW domain-containing protein n=1 Tax=Tribonema min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1067..1088
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1132..1162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1172..1186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 727..749
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1065..1098
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 765..779
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1132..1195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 786..822
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 764..822
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 1187..1221
score: 11.4081
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 1185..1221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:598783..610074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348025mRNA_1310Tribonema minus UTEX_B_3156 mRNAContig_18 598783..610074 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348025|estExt_Genemark1.C_Ctg_180072 ID=Trimin1|348025|estExt_Genemark1.C_Ctg_180072|Name=jgi.p|Trimin1|348025|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1244bp
MSDSEAIAVGKALRAVDERSLEAWLHWVRQGGTAVCSDIWREAWDSFRPR
TNADLTFGPNDPAHNEVVFLRDAGSGSAANEAQALAVQVPVVELGADGLP
AVQSETGDVAAARTVAAALRESDVLRLGKCRVTGDAVVGSGGARAPPLWL
RVAVVSVREECVVLARRCGEWGAPLAECDSAHGGLLEVPLARLAGAVVLR
ERGDSRSAAAAPPLPPPDFRTAAAAGCTVVAFALPLPSAEWGLAWLRAAA
AEDCRLGGADSLAARAEGGALSAAAALQAEAARERRRRRDRALRDRADAR
VREARALLPRLSPARALRRDAWAAVGRALFAAEGGRRGRGALRAEWARWT
EAAAAAVEAGQQFSAEGQRAAAAAAAQQRAGLPARPRAAAPAAQRQRCGG
AAGAVAAADDCRAAWLRFRPRTSLDAPALVNLRAWVQSSRRPRPRAAPWR
SGAGSSSVCDTFSDCMRANASDAAAAKLAEFSGAHLKGDSNRLAGGAPTA
TLSSALRGDALARAKQMVKELPERTRTVLQFLEPSSEPLQVPAVSMVRTP
LSGPPAGPPSGFLMGEGLFPLPPGKGIGGLFPLPPGKGDRRGQKGLTLVP
RDVVAEVRPGDWLLVTSGTGGYKGVWRQVVGLSVLQPAVMVRARGSRAYG
AQSDGSPWQLPRRRTEAARGSAAAAAASAAATAAASGAGADARRARSGSD
AWRPLRVGLEELWGAWVFRDDEPCASQDFNTDAPGARWSEPPPPRTGCVG
LAFQLPVPDAAGAVDELRRWARSDAAEPEHTPRTTASGGDGISASRVPSD
SKIQHNSAQHRDANSYLPSNTRRSAAATAAGDAAAAAAGGGRALLLPAPM
LRALERGVARLLVAWSGAGEARVELLSTEPPRADAGSSAAAAAAPLRSAW
RAVYAGAAGACEVTGLRQCSTYTLRVRAAGRRVALLRACTLAAAPPRAPL
LARWLPRGGGGAHERVAVIEMGCDCAAAAGRWVLRRRRLPMLSADLAADQ
QTALATARQWSAIGGDTSADAGPEASVNAAGGRVFEVYRGRKGEAAVGGL
EGYRGGWSPALPVTVPQQLRARQSHPPSRAQHTSGRSGSAAEADGDAQAV
VRALGPRLSAAQQRRVTAAFARVLRSGGASSSGSDCSAGSRLRSSSSSTE
RGSGSGGDGSGASGDTGDTAGDGASGKRDARQNSRKGRLPRGWRRVHDGA
GGAAFYVNDGAGVAQWTRPQAWQEEAVALDLGDAAAAMRFEHD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf