Trimin1|347993|estExt_Genemark1.C_Ctg_180014 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347993
Unique NameTrimin1|347993|estExt_Genemark1.C_Ctg_180014
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length772
Homology
BLAST of jgi.p|Trimin1|347993 vs. uniprot
Match: A0A836CJ66_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ66_9STRA)

HSP 1 Score: 1371 bits (3549), Expect = 0.000e+0
Identity = 771/771 (100.00%), Postives = 771/771 (100.00%), Query Frame = 0
Query:    1 MDRRKRTSLEAMVDAKNEELRRMLLDKKAMLAEEHKVRERLSRDHANTIHQISNIETAIRRLRADHLASVEAQQAASRAELSVLEQEVAAMNKQRLALERYVVTFDIVDQEHATLKARLRSLKESEGKEAQENAAELEGLKSSVFQLRTRLDEVFRKTLAAVQGQTKDSAMVEVLQEAREAHDHAAQLAKTLKARTATVARVLQAHAQSRRALMQVRVDRDITADTVKAQADRISALDAAVAAQEADVTRRERELQVALTRQAQLATESADLQRLGGEVTAAQRACAAARDRAVKARHRALRAARAGGGGVSSSGMQRSLSLPALRRSGIDTVDTESDRDYKAAEERFLVFRAQLLEIIQNTEQFRSRLKESIAVASKLSQNFLKVSQGEGDSGVALDELLFVDLDKYVLSDLKIQHESYNDINKLVKERYELKVELQHYSDKVQELNDNPKVAAERKVRNEEKYATANTRLREQTDALLRRFAESEVRRRRVLEEDLPRIMDLKRLAYAALATNAEKAAQGLVLAPMRSGSRGSSSAFGSKDLPGSARGSYDNTVTGQGAESARMSDVPLGGTSSQRTSVNTDHGASSHALTAKPAAAALLDSPPSHLYKRASGSMESVQPGGNAGGVVGQSSHSGSAAAAASEDVVSTRTALEQNMGATAVPVSQEVFHEASYEQEQEPVTAAATPEANAADANASRTEPEVVDGGLGPGYMRVRALYDFEAAEEGDLNFKANDIIVTDASRWSADGWVTGTCNGQTGQFPSNYTERID 771
            MDRRKRTSLEAMVDAKNEELRRMLLDKKAMLAEEHKVRERLSRDHANTIHQISNIETAIRRLRADHLASVEAQQAASRAELSVLEQEVAAMNKQRLALERYVVTFDIVDQEHATLKARLRSLKESEGKEAQENAAELEGLKSSVFQLRTRLDEVFRKTLAAVQGQTKDSAMVEVLQEAREAHDHAAQLAKTLKARTATVARVLQAHAQSRRALMQVRVDRDITADTVKAQADRISALDAAVAAQEADVTRRERELQVALTRQAQLATESADLQRLGGEVTAAQRACAAARDRAVKARHRALRAARAGGGGVSSSGMQRSLSLPALRRSGIDTVDTESDRDYKAAEERFLVFRAQLLEIIQNTEQFRSRLKESIAVASKLSQNFLKVSQGEGDSGVALDELLFVDLDKYVLSDLKIQHESYNDINKLVKERYELKVELQHYSDKVQELNDNPKVAAERKVRNEEKYATANTRLREQTDALLRRFAESEVRRRRVLEEDLPRIMDLKRLAYAALATNAEKAAQGLVLAPMRSGSRGSSSAFGSKDLPGSARGSYDNTVTGQGAESARMSDVPLGGTSSQRTSVNTDHGASSHALTAKPAAAALLDSPPSHLYKRASGSMESVQPGGNAGGVVGQSSHSGSAAAAASEDVVSTRTALEQNMGATAVPVSQEVFHEASYEQEQEPVTAAATPEANAADANASRTEPEVVDGGLGPGYMRVRALYDFEAAEEGDLNFKANDIIVTDASRWSADGWVTGTCNGQTGQFPSNYTERID
Sbjct:    1 MDRRKRTSLEAMVDAKNEELRRMLLDKKAMLAEEHKVRERLSRDHANTIHQISNIETAIRRLRADHLASVEAQQAASRAELSVLEQEVAAMNKQRLALERYVVTFDIVDQEHATLKARLRSLKESEGKEAQENAAELEGLKSSVFQLRTRLDEVFRKTLAAVQGQTKDSAMVEVLQEAREAHDHAAQLAKTLKARTATVARVLQAHAQSRRALMQVRVDRDITADTVKAQADRISALDAAVAAQEADVTRRERELQVALTRQAQLATESADLQRLGGEVTAAQRACAAARDRAVKARHRALRAARAGGGGVSSSGMQRSLSLPALRRSGIDTVDTESDRDYKAAEERFLVFRAQLLEIIQNTEQFRSRLKESIAVASKLSQNFLKVSQGEGDSGVALDELLFVDLDKYVLSDLKIQHESYNDINKLVKERYELKVELQHYSDKVQELNDNPKVAAERKVRNEEKYATANTRLREQTDALLRRFAESEVRRRRVLEEDLPRIMDLKRLAYAALATNAEKAAQGLVLAPMRSGSRGSSSAFGSKDLPGSARGSYDNTVTGQGAESARMSDVPLGGTSSQRTSVNTDHGASSHALTAKPAAAALLDSPPSHLYKRASGSMESVQPGGNAGGVVGQSSHSGSAAAAASEDVVSTRTALEQNMGATAVPVSQEVFHEASYEQEQEPVTAAATPEANAADANASRTEPEVVDGGLGPGYMRVRALYDFEAAEEGDLNFKANDIIVTDASRWSADGWVTGTCNGQTGQFPSNYTERID 771          
BLAST of jgi.p|Trimin1|347993 vs. uniprot
Match: A0A835Z3B5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3B5_9STRA)

HSP 1 Score: 212 bits (540), Expect = 1.300e-60
Identity = 117/195 (60.00%), Postives = 146/195 (74.87%), Query Frame = 0
Query:  358 IIQNTEQFRSRLKESIAVASKLSQNFLKVSQGE-------------------------GDSGVALDELLFVDLDKYVLSDLKIQHESYNDINKLVKERYELKVELQHYSDKVQELNDNPKVAAERKVRNEEKYATANTRLREQTDALLRRFAESEVRRRRVLEEDLPRIMDLKRLAYAALATNAEKAAQGLVLAP 527
            +I N E FR++LKES  +ASKL+ NF+++SQG+                          DS + ++++L++D+D+++LSDLK Q ESY+DINKLVKERYELKVELQHYSDKVQELN NPK   E+KVRN EKYATAN +LREQTDAL+RRFAE+E+RRRRVLEEDLPR+MDL R  Y A+A NA KAAQG+ LAP
Sbjct:    1 MITNAEHFRAKLKESAGLASKLAHNFMRMSQGDVGEGEPEEAWMTTAKRQSEVLKTTTADSALVVEQVLYIDMDQFLLSDLKAQLESYSDINKLVKERYELKVELQHYSDKVQELNFNPKATEEKKVRNAEKYATANNKLREQTDALMRRFAEAELRRRRVLEEDLPRLMDLHRSTYEAMAANALKAAQGITLAP 195          
BLAST of jgi.p|Trimin1|347993 vs. uniprot
Match: D8LEH1_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEH1_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 3.240e-38
Identity = 155/519 (29.87%), Postives = 242/519 (46.63%), Query Frame = 0
Query:  333 VDTESDRDYKAAEERFLVFRAQLLEIIQNTEQFRSRLKESIAVASKLSQNFLKVSQGEG------------------------DSGVALDELLFVDLDKYVLSDLKIQHESYNDINKLVKERYELKVELQHYSDKVQELNDNPKVAAERKVRNEEKYATANTRLREQTDALLRRFAESEVRRRRVLEEDLPRIMDLKRLAYAALATNAEKAA--------------------QGLVLAPMRSGSRGSSSAFGSKDLPGSARGSYDNTVTGQGAESARM----------------------SDVPLGGTSSQRTSVNTDHGASSHALTAKPAAAALLDSPPSHLYKRASGSMESVQPGGNAGGVVGQSSHSGSAAAAASEDVVSTRTALEQNMGATAVPVSQEVFHEASYEQEQEPVTAAATPEANAADANASRTEP-EVVDGG----------------LGPGYMRVRALYDFEAAEEGDLNFKANDIIVTDASRWSADGWVTGTCNGQTGQFPSNYTE 768
            +D + D++Y +A ERFL F+ QL  ++ +T+ FR  L+ES+  A +L+ +F +V+ G G                        +S V+L + L  +L++ V+  L+ +  +++ ++  + ER  +K+E+ HYS+KVQEL  + K   E+K RN+EKYA A+  LR+QT+ L+  FA +E  R+R+L +D P ++  ++ A+ A A N  KAA                    Q   ++P   G+  S S  G  +     + ++++  +   AESA                        +D P   T+S  +  +    A  H     P+ AA L +P     K A+   ES +P   A  V  +++ +GS     S D                               E E +TAA    A A +A+A   E  E V G                 L PG +RVRALYD+EA +EGDL+F   D+I+TD   +S DGWV+GTC+G TG FP+NYTE
Sbjct:   36 LDADEDQNYVSASERFLEFQTQLGMVLHHTQLFRKTLEESLQHAVELADDFGRVAAGNGGGRTMEPWAQKAGGQAFFLKGMLEESAVSLRQHLCDELEEKVVRSLREEVANFSTVHTQMLERSNMKMEMLHYSNKVQELKGSQKATDEKKDRNKEKYAQASQALRDQTNQLMSIFAHAEQLRQRLLTQDFPSVITAEKNAFDAFAINLNKAAAETSDGEPRPPRMSDAARAPQRTPMSPKDGGAPWSGSNDGG-EFGEELKRAHEHQNSKMAAESAXXXXXXXXXXXXXXXXXXXXXXXXADTPAM-TNSSTSGADAADDAEKH----DPSEAAALAAPAPAGEKDATAPTESPKPPAAAATVDDEAAVAGSGPKTDSPD------------------------------DEAEALTAAVPAMATAPEASAPGEEQAEEVPGXXXXXXXXXXXXXXXXXLEPGKVRVRALYDYEATQEGDLSFGVGDMIITDGGAFSGDGWVSGTCHGNTGIFPANYTE 518          
BLAST of jgi.p|Trimin1|347993 vs. uniprot
Match: A0A835Z502_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z502_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.880e-25
Identity = 56/100 (56.00%), Postives = 69/100 (69.00%), Query Frame = 0
Query:  683 TAAATPEANAADANASRTEPEVVDGG-----------LGPGYMRVRALYDFEAAEEGDLNFKANDIIVTDASRWSADGWVTGTCNGQTGQFPSNYTERID 771
            T A +PE +A D   +  +P    GG           L PG++RVRAL+DFEAA+ GDLNFKA DII+T++++W  DGWV G CNGQTGQFPSNYTERID
Sbjct:   45 TVATSPEQDA-DGQENPADPGSAGGGPPMLAQSDSEELPPGFIRVRALFDFEAAQPGDLNFKAGDIIITESAQWGMDGWVNGICNGQTGQFPSNYTERID 143          
BLAST of jgi.p|Trimin1|347993 vs. uniprot
Match: UPI000644A38D (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644A38D)

HSP 1 Score: 67.8 bits (164), Expect = 2.840e-8
Identity = 33/65 (50.77%), Postives = 43/65 (66.15%), Query Frame = 0
Query:  707 GGLGPGYMRVRALYDFEAAEEGDLNFKANDII-VTDASRWSADGWVTGTCNGQTGQFPSNYTERI 770
            GG   GY + +ALYD+EAA+EGDL+F A DII + D S   A+GW  G C G TG FPS + + +
Sbjct:  316 GGDASGYPQAKALYDYEAAQEGDLSFYAGDIISIHDQS--DANGWWVGECQGFTGTFPSTFVQLV 378          
BLAST of jgi.p|Trimin1|347993 vs. uniprot
Match: F2U5Y3_SALR5 (Endophilin n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U5Y3_SALR5)

HSP 1 Score: 66.6 bits (161), Expect = 4.710e-8
Identity = 35/70 (50.00%), Postives = 42/70 (60.00%), Query Frame = 0
Query:  701 EPEVVDGGLGPGYMRVRALYDFEAAEEGDLNFKANDIIVTDASRWSADGWVTGTCNGQTGQFPSNYTERI 770
            E E      G G +R RALYD++A EEG+L F   DII TD  +   +GW  G CNGQ G FP+NY E I
Sbjct:  260 EQEQQQAAEGGGGLRARALYDYQADEEGELTFDPGDII-TDIEQID-EGWWQGACNGQFGLFPANYVELI 327          
BLAST of jgi.p|Trimin1|347993 vs. uniprot
Match: A0A8H6XFV9_9AGAR (DUF500-domain-containing protein n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H6XFV9_9AGAR)

HSP 1 Score: 65.9 bits (159), Expect = 1.670e-7
Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 0
Query:  712 GYMRVRALYDFEAAEEGDLNFKANDIIVTDASRWSADGWVTGTCNGQTGQFPSNYTERI 770
            G  RV A+YDF+AA+ GDL+F   D+IV      S D W TGT +G+ G FP+N+TE +
Sbjct:  410 GVARVIAMYDFKAAQPGDLSFSKGDVIVVTKRSESTDDWWTGTLDGRKGIFPANFTEVV 468          
BLAST of jgi.p|Trimin1|347993 vs. uniprot
Match: A0A182VSJ4_9DIPT (Uncharacterized protein n=1 Tax=Anopheles minimus TaxID=112268 RepID=A0A182VSJ4_9DIPT)

HSP 1 Score: 64.7 bits (156), Expect = 6.650e-7
Identity = 23/61 (37.70%), Postives = 39/61 (63.93%), Query Frame = 0
Query:  711 PGYMRVRALYDFEAAEEGDLNFKANDIIVTDASRWSADGWVTGTCNGQTGQFPSNYTERID 771
            PGYM+ RA+Y+F A    +++F+  DI++    + +  GW+ G  NG TG FP ++ E++D
Sbjct:  724 PGYMKYRAIYEFNARNSDEISFQPGDIVMVPLEQNAEPGWLAGEINGHTGWFPESFVEKVD 784          
BLAST of jgi.p|Trimin1|347993 vs. uniprot
Match: A0A182RWF0_ANOFN (Uncharacterized protein n=1 Tax=Anopheles funestus TaxID=62324 RepID=A0A182RWF0_ANOFN)

HSP 1 Score: 64.7 bits (156), Expect = 6.700e-7
Identity = 23/61 (37.70%), Postives = 39/61 (63.93%), Query Frame = 0
Query:  711 PGYMRVRALYDFEAAEEGDLNFKANDIIVTDASRWSADGWVTGTCNGQTGQFPSNYTERID 771
            PGYM+ RA+Y+F A    +++F+  DI++    + +  GW+ G  NG TG FP ++ E++D
Sbjct:  760 PGYMKYRAIYEFNARNNDEISFQPGDIVMVPLEQNAEPGWLAGEINGHTGWFPESFVEKVD 820          
BLAST of jgi.p|Trimin1|347993 vs. uniprot
Match: A0A6P8H3N2_ACTTE (uncharacterized protein LOC116287529 isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8H3N2_ACTTE)

HSP 1 Score: 63.2 bits (152), Expect = 1.090e-6
Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 0
Query:  718 ALYDFEAAEEGDLNFKANDIIVTDASRWSADGWVTGTCNGQTGQFPSNYTERI 770
            ALYD++A EE D+ F   DII         +GW +GTCNGQTG FPSNY E++
Sbjct:  151 ALYDYQAIEENDITFDPGDIITN--IEVIDEGWWSGTCNGQTGWFPSNYVEKL 201          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347993 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJ66_9STRA0.000e+0100.00SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835Z3B5_9STRA1.300e-6060.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LEH1_ECTSI3.240e-3829.87SH3 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z502_9STRA1.880e-2556.00SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
UPI000644A38D2.840e-850.77hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F2U5Y3_SALR54.710e-850.00Endophilin n=1 Tax=Salpingoeca rosetta (strain ATC... [more]
A0A8H6XFV9_9AGAR1.670e-749.15DUF500-domain-containing protein n=1 Tax=Mycena ve... [more]
A0A182VSJ4_9DIPT6.650e-737.70Uncharacterized protein n=1 Tax=Anopheles minimus ... [more]
A0A182RWF0_ANOFN6.700e-737.70Uncharacterized protein n=1 Tax=Anopheles funestus... [more]
A0A6P8H3N2_ACTTE1.090e-652.83uncharacterized protein LOC116287529 isoform X1 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 175..195
NoneNo IPR availableCOILSCoilCoilcoord: 430..450
NoneNo IPR availableCOILSCoilCoilcoord: 67..101
NoneNo IPR availableGENE3D2.30.30.40SH3 Domainscoord: 711..771
e-value: 2.3E-16
score: 61.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 677..697
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 618..644
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 536..562
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 536..644
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 569..589
NoneNo IPR availablePANTHERPTHR14167SH3 DOMAIN-CONTAININGcoord: 246..768
NoneNo IPR availablePANTHERPTHR14167:SF89ENDOPHILIN-Acoord: 246..768
NoneNo IPR availableCDDcd00174SH3coord: 715..766
e-value: 9.03104E-15
score: 67.1027
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 728..743
score: 25.51
coord: 714..724
score: 47.93
coord: 758..770
score: 44.12
IPR001452SH3 domainSMARTSM00326SH3_2coord: 714..771
e-value: 5.4E-15
score: 65.8
IPR001452SH3 domainPFAMPF00018SH3_1coord: 717..764
e-value: 7.0E-9
score: 35.2
IPR001452SH3 domainPROSITEPS50002SH3coord: 711..771
score: 23.735487
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60Arfaptin homology (AH) domain/BAR domaincoord: 324..524
e-value: 7.1E-15
score: 56.9
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 333..475
IPR036028SH3-like domain superfamilySUPERFAMILY50044SH3-domaincoord: 711..770

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:126205..136723 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347993mRNA_1251Tribonema minus UTEX_B_3156 mRNAContig_18 125805..136723 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347993|estExt_Genemark1.C_Ctg_180014 ID=Trimin1|347993|estExt_Genemark1.C_Ctg_180014|Name=jgi.p|Trimin1|347993|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=772bp
MDRRKRTSLEAMVDAKNEELRRMLLDKKAMLAEEHKVRERLSRDHANTIH
QISNIETAIRRLRADHLASVEAQQAASRAELSVLEQEVAAMNKQRLALER
YVVTFDIVDQEHATLKARLRSLKESEGKEAQENAAELEGLKSSVFQLRTR
LDEVFRKTLAAVQGQTKDSAMVEVLQEAREAHDHAAQLAKTLKARTATVA
RVLQAHAQSRRALMQVRVDRDITADTVKAQADRISALDAAVAAQEADVTR
RERELQVALTRQAQLATESADLQRLGGEVTAAQRACAAARDRAVKARHRA
LRAARAGGGGVSSSGMQRSLSLPALRRSGIDTVDTESDRDYKAAEERFLV
FRAQLLEIIQNTEQFRSRLKESIAVASKLSQNFLKVSQGEGDSGVALDEL
LFVDLDKYVLSDLKIQHESYNDINKLVKERYELKVELQHYSDKVQELNDN
PKVAAERKVRNEEKYATANTRLREQTDALLRRFAESEVRRRRVLEEDLPR
IMDLKRLAYAALATNAEKAAQGLVLAPMRSGSRGSSSAFGSKDLPGSARG
SYDNTVTGQGAESARMSDVPLGGTSSQRTSVNTDHGASSHALTAKPAAAA
LLDSPPSHLYKRASGSMESVQPGGNAGGVVGQSSHSGSAAAAASEDVVST
RTALEQNMGATAVPVSQEVFHEASYEQEQEPVTAAATPEANAADANASRT
EPEVVDGGLGPGYMRVRALYDFEAAEEGDLNFKANDIIVTDASRWSADGW
VTGTCNGQTGQFPSNYTERID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR027267AH/BAR_dom_sf
IPR036028SH3-like_dom_sf