Trimin1|347952|estExt_Genemark1.C_Ctg_170114 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347952
Unique NameTrimin1|347952|estExt_Genemark1.C_Ctg_170114
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length210
Homology
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BLAST of jgi.p|Trimin1|347952 vs. uniprot
Match: A0A835Z694_9STRA (DUF1995 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z694_9STRA)

HSP 1 Score: 415 bits (1066), Expect = 1.420e-146
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0 
Query:    1 MQPDEIQRLALPAEFAVPGVSEWPGGRAQQYEVAEPLVRALLRKLDRAANGGVVSRLKTQVTSREDYTALVLSEAPERKDDCAAILNLTAEAALEAQTAAFLKEMGPRLVVLVNPGWNAPSDFGFFARRRAETLLAPFLETYTLVKLTCRSQKVALLRSWPGPWMLYAMAGEDRGAATKWDQVAVLDREDRPSYRECEKLLEAKASAAA 209
            MQPDEIQRLALPAEFAVPGVSEWPGGRAQQYEVAEPLVRALLRKLDRAANGGVVSRLKTQVTSREDYTALVLSEAPERKDDCAAILNLTAEAALEAQTAAFLKEMGPRLVVLVNPGWNAPSDFGFFARRRAETLLAPFLETYTLVKLTCRSQKVALLRSWPGPWMLYAMAGEDRGAATKWDQVAVLDREDRPSYRECEKLLEAKASAAA
Sbjct:    1 MQPDEIQRLALPAEFAVPGVSEWPGGRAQQYEVAEPLVRALLRKLDRAANGGVVSRLKTQVTSREDYTALVLSEAPERKDDCAAILNLTAEAALEAQTAAFLKEMGPRLVVLVNPGWNAPSDFGFFARRRAETLLAPFLETYTLVKLTCRSQKVALLRSWPGPWMLYAMAGEDRGAATKWDQVAVLDREDRPSYRECEKLLEAKASAAA 209
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347952 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z694_9STRA1.420e-146100.00DUF1995 domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 14..198
e-value: 2.8E-17
score: 63.4
NoneNo IPR availablePANTHERPTHR35509:SF4SUBFAMILY NOT NAMEDcoord: 19..207
NoneNo IPR availablePANTHERPTHR35509DOMAIN PROTEIN, PUTATIVE (DUF1995)-RELATEDcoord: 19..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:858899..862275 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347952mRNA_3427Tribonema minus UTEX_B_3156 mRNAContig_17 858493..862275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347952|estExt_Genemark1.C_Ctg_170114 ID=Trimin1|347952|estExt_Genemark1.C_Ctg_170114|Name=jgi.p|Trimin1|347952|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=210bp
MQPDEIQRLALPAEFAVPGVSEWPGGRAQQYEVAEPLVRALLRKLDRAAN
GGVVSRLKTQVTSREDYTALVLSEAPERKDDCAAILNLTAEAALEAQTAA
FLKEMGPRLVVLVNPGWNAPSDFGFFARRRAETLLAPFLETYTLVKLTCR
SQKVALLRSWPGPWMLYAMAGEDRGAATKWDQVAVLDREDRPSYRECEKL
LEAKASAAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995