Trimin1|347487|estExt_Genemark1.C_Ctg_120125 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347487
Unique NameTrimin1|347487|estExt_Genemark1.C_Ctg_120125
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length822
Homology
BLAST of jgi.p|Trimin1|347487 vs. uniprot
Match: A0A835ZI34_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI34_9STRA)

HSP 1 Score: 1599 bits (4141), Expect = 0.000e+0
Identity = 821/821 (100.00%), Postives = 821/821 (100.00%), Query Frame = 0
Query:    1 MALDGGSKPKFRAESEFRRGLEGGLRTALAALIHLLWMEIGPYPHPVLFIGTIVAVLATRDTAGATIAIHLVAKNSNLGTGLCIFFFTHLLLRRRRLDIVAKRLRGIVEGGICALLASLFPYPRLAIRESVHRAQYVCYLMHRSMDACVDGFIAGRDERKLSKVRLLIEQASMRLNLKHIKELNTACRMELTVLCWGQAGALVPLEILDNVTKGLLALKNDAEQEAFVAHLTPRLRDVKAQTAEASGDWIAGFKTASSRPPPPSHAVTATSVAAVGKGSVSVAVCKDVRHAEGGSYGERLSPVLLAVARSIDKLVQDYQRARLHILYGRNDPNEKAVWESFEGSVSYQGGLQDDDVADSLHDGGTPLPSPPAPHLFAAGTAQKDARIIFEETPIGFDRGIHDKVAADWARHGYRGPFARGCFMSNLVTFSVMLARLVDMEVALERNRGLSAFDKLKVAVCAMAADTWEALSPFIAFGSQDATSLHCVKVAGILTAASLFTLVPELSVKFYPGAWVAFSCGVILAEDTGSAVAMGSQRLLGSPTHGYAAVVAAFTAVLIMVGIFTPAVHQAYSPVVRIQNTIIGVVLYFALDNIIWPARAITALQRHLAGGLGVMRKEAVHSAAEGLANAAPIPPPLHLIPLPPVALGGLKQVADSLEHQAKRAEQSFFTSCTDELWSAEVKQRSGIMTRVGALLRIARMSLQDAEDIFSAPPQPTCADLFGMQVRNACAPTVTKEGRVQQAQRLLQLQVEAELLHEAIDQDMVTLMTIGPPAGQAPQTSVQFALRFTTTTFSVLRLHKGLLTLGHAITDLLEREARIFYYT 821
            MALDGGSKPKFRAESEFRRGLEGGLRTALAALIHLLWMEIGPYPHPVLFIGTIVAVLATRDTAGATIAIHLVAKNSNLGTGLCIFFFTHLLLRRRRLDIVAKRLRGIVEGGICALLASLFPYPRLAIRESVHRAQYVCYLMHRSMDACVDGFIAGRDERKLSKVRLLIEQASMRLNLKHIKELNTACRMELTVLCWGQAGALVPLEILDNVTKGLLALKNDAEQEAFVAHLTPRLRDVKAQTAEASGDWIAGFKTASSRPPPPSHAVTATSVAAVGKGSVSVAVCKDVRHAEGGSYGERLSPVLLAVARSIDKLVQDYQRARLHILYGRNDPNEKAVWESFEGSVSYQGGLQDDDVADSLHDGGTPLPSPPAPHLFAAGTAQKDARIIFEETPIGFDRGIHDKVAADWARHGYRGPFARGCFMSNLVTFSVMLARLVDMEVALERNRGLSAFDKLKVAVCAMAADTWEALSPFIAFGSQDATSLHCVKVAGILTAASLFTLVPELSVKFYPGAWVAFSCGVILAEDTGSAVAMGSQRLLGSPTHGYAAVVAAFTAVLIMVGIFTPAVHQAYSPVVRIQNTIIGVVLYFALDNIIWPARAITALQRHLAGGLGVMRKEAVHSAAEGLANAAPIPPPLHLIPLPPVALGGLKQVADSLEHQAKRAEQSFFTSCTDELWSAEVKQRSGIMTRVGALLRIARMSLQDAEDIFSAPPQPTCADLFGMQVRNACAPTVTKEGRVQQAQRLLQLQVEAELLHEAIDQDMVTLMTIGPPAGQAPQTSVQFALRFTTTTFSVLRLHKGLLTLGHAITDLLEREARIFYYT
Sbjct:    1 MALDGGSKPKFRAESEFRRGLEGGLRTALAALIHLLWMEIGPYPHPVLFIGTIVAVLATRDTAGATIAIHLVAKNSNLGTGLCIFFFTHLLLRRRRLDIVAKRLRGIVEGGICALLASLFPYPRLAIRESVHRAQYVCYLMHRSMDACVDGFIAGRDERKLSKVRLLIEQASMRLNLKHIKELNTACRMELTVLCWGQAGALVPLEILDNVTKGLLALKNDAEQEAFVAHLTPRLRDVKAQTAEASGDWIAGFKTASSRPPPPSHAVTATSVAAVGKGSVSVAVCKDVRHAEGGSYGERLSPVLLAVARSIDKLVQDYQRARLHILYGRNDPNEKAVWESFEGSVSYQGGLQDDDVADSLHDGGTPLPSPPAPHLFAAGTAQKDARIIFEETPIGFDRGIHDKVAADWARHGYRGPFARGCFMSNLVTFSVMLARLVDMEVALERNRGLSAFDKLKVAVCAMAADTWEALSPFIAFGSQDATSLHCVKVAGILTAASLFTLVPELSVKFYPGAWVAFSCGVILAEDTGSAVAMGSQRLLGSPTHGYAAVVAAFTAVLIMVGIFTPAVHQAYSPVVRIQNTIIGVVLYFALDNIIWPARAITALQRHLAGGLGVMRKEAVHSAAEGLANAAPIPPPLHLIPLPPVALGGLKQVADSLEHQAKRAEQSFFTSCTDELWSAEVKQRSGIMTRVGALLRIARMSLQDAEDIFSAPPQPTCADLFGMQVRNACAPTVTKEGRVQQAQRLLQLQVEAELLHEAIDQDMVTLMTIGPPAGQAPQTSVQFALRFTTTTFSVLRLHKGLLTLGHAITDLLEREARIFYYT 821          
BLAST of jgi.p|Trimin1|347487 vs. uniprot
Match: A0A836CDY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDY4_9STRA)

HSP 1 Score: 531 bits (1369), Expect = 2.110e-169
Identity = 420/1189 (35.32%), Postives = 543/1189 (45.67%), Query Frame = 0
Query:    7 SKPKFRAESEFRRGLEGGLRTALAALIHLLWMEIGPYPHPVLFIGTIVAVLATRDTAGATIAIHL------------------VAKNSNLGTGLCIFFFTHLLLRRRRLDIVAKRL----------------------------RGIVEGGICALLASLFPYPRLAIRESVHRAQYVCYLMHRSMDACVDGFIAGRDERKLSKVRLLIEQASMRLNLKHIKELNTACRMELTVLCWGQAGALVPLEIL--------------DNVTKGLLALKNDAEQEAFVAHLTPRLRDVKAQTAEASGDW--------IAGFKTASSRPPPPSHAVTATSVAAVGKGSVSVAVCKDVRHAEGGSYGERLSPVLLAVARSIDKLVQD--------------------------YQRARLHILYGRND------------------------------------PNEKAVWESF-EGSVSYQGGLQDDD---VADSLHDGGTPLPSPPAPHLFAAGTAQKDAR----IIFEETPIGFDRGIHDKVAADWARHGYRGPFARGCFMSNLVTFSVMLARLVDMEVALERNRGLSAFDKLKVAVCAMAADTWEALSPFIAF--------------GS--------------------QDATSL----------------HCVKVAGILTAASLFTLVPELSVKFYPGAWVAFSCGVILAEDTGSAVAMGSQRLLG-----------------------------------------------------------SPTHGYAAVVAAFTAVLIMVGIFTPAVHQAYSPVVRIQNTIIGVVLYFALDNIIWPARAITALQRHLAGGLGVMRKEA------------------------------------------VHSAAEGL---------------ANAAPI-------------------PPP----------LHLIPLPPVALGGLKQVADSLEHQAK---------------------------------------RAEQSFFTSCTDELWSAEVKQRSGIMTRVGALLRIARMSLQDAEDIFSAPPQPTCADLFGMQVRN---ACAPTVTKEGRVQQAQRLLQLQVEAELLHEAIDQDMVTLMTIGPPAGQAPQTSVQFALRFTTTTFSVLRLHKGLLTLGHAITDLLEREARIFYY 820
            S P + AESEFRRGLE   RTALA LI L+W+     PHPV+FI TI+A++ T DTAGAT+   L                  VA+NS  GTG+CIF    L+LRRRRLD++ +RL                            RGIVEGGIC+LLASL PYPRLAIRE   R+QY+CYL+ R   ACVDGF+AGRDER +S+  LL EQ  MRLN   IK L+ AC MEL VL WGQAG L P+E++              + + + L+AL++DAEQ  F+ HL P L+D K    +ASG          +A  +   + P        A ++A +  G+      +     +G +YGERL P+L  VA  +++L++D                          YQ ARL IL+GRN+                                    P+ +A  +   +GS   +  L  +    V    H     L    A     AG A  DAR     I  + P  F + +HD+V A W + G+RG FARGCF+SNLVT  VML+RLV+M   LE+ + ++ ++K K+AV AM   TW+A+SP   +              GS                    + A SL                + +KVA ILT  SLF+L P L+ +F PGAWVAF+   I++EDT SAV  G+ RL+G                                                           S TH YAAVVAAFTAV+IM+G F+   H  Y+ + RIQNTI G+++Y ALDN I P RA   L+ H+   LG M+ E                                           VHSAAEGL               A +A +                   PP           L  + LPPV LGGL QV  +LE Q+K                                       RAEQSF   C  + WS E+KQ SGI   + +LLR+  ++L+DAE IF APP+P+ +   G +  +   A A     E RVQQAQRLLQLQ E   L++AID DMV  M         P  S+ FALRFTTTTFSV+RL +GLL LGHA+TDLLERE  IFYY
Sbjct:   41 STPVYVAESEFRRGLEASFRTALATLISLVWITFRADPHPVIFINTILAIVTTLDTAGATLVAQLSVLHGVSLAAALAVITELVARNSAWGTGMCIFIGNFLILRRRRLDVLGRRLGCATLLAAALSFRTLGVDGWSSYLWAWLRGIVEGGICSLLASLLPYPRLAIREGALRSQYMCYLLQRGTSACVDGFLAGRDERMISRAGLLAEQ--MRLNCARIKGLHGACYMELNVLFWGQAGGLAPVELMGLVSQNMAPRVECVEGMRQALIALEHDAEQSGFIEHLWPHLQDTKHALGQASGIHMFMYSYLVLALMQEFLALPEMTGWKRRAAALACLTGGAAGGGARERPVWEDGRTYGERLYPLLEEVATRMEELLEDGAATGENLAEVCAFVELDPDTTALRGYQIARLQILHGRNEDATTIARPPASPRTAVATXXXXXPPSSGPQPSAASFPSRRAAAQLLLDGSGHGRSALLSNGHEAVIGDGHGAALTLDMITADDDGDAGGA--DARDAGGSIGGKVPPPFSQALHDEVVAAWDKRGFRGAFARGCFVSNLVTMVVMLSRLVEMVAVLEKRQEMTVWNKFKLAVRAMLRSTWKAVSPVDTYKTIKSTLSSWVQQQGSFFPHDEERQQALTEGGMRLKRSAPSLCRRLSALLRDNQSGFAYPLKVAAILTVCSLFSLEPTLAEQFAPGAWVAFTAAYIVSEDTSSAVVAGNLRLIGRQVALTLHDGGCLVLGAMYGWVLTDIALRNSTGDHPEALRWCAVLGLPPWVALCCFFRHSRTHAYAAVVAAFTAVVIMIGTFSAKDHSGYAALARIQNTIFGLIIYMALDNCIAPVRAKIVLKTHVTHALGTMKNEVEAVEDSLAGSLTCVDTAEAHARAASVDDAAADAPSPRSLMQVVHSAAEGLTSRRHSGQPEQLRSAAQSASLKLTGGTKDRMINWFSRSGAPPSSRHGARRVVQLREVTLPPVDLGGLAQVTAALEKQSKYMVQASQEPNLWHRPFHLPSYMAVYQAQREVLAALVLVKRAEQSFAKVCAQDAWSHEIKQLSGITGHMASLLRLVALALEDAEGIFRAPPEPSVSMWRGWKRSHEATAAAAAAAHESRVQQAQRLLQLQAETRRLNQAIDSDMVAYMLRHRVTAARP--SLFFALRFTTTTFSVMRLQRGLLALGHAVTDLLERENYIFYY 1223          
BLAST of jgi.p|Trimin1|347487 vs. uniprot
Match: A0A836CQ15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ15_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 4.300e-16
Identity = 65/183 (35.52%), Postives = 93/183 (50.82%), Query Frame = 0
Query:  484 LHCVKVAGILTAASLFTLVPELSVKFYPGAWVAFSCGVILAEDTGSAVAMGSQRLLGS----------------------------------------PTHGYAAVVAAFTAVLIMVGIFTPAVHQAYSPVVRIQNTIIGVVLYFA-----------LDNIIWPARAITALQRHLAGGLGVMR 615
            +H +KVA ILT  +LF LV  LS K   GAWV  + G I++ED+ SA    + RL+GS                                         +HGYAA+V+AFTAV+I++G F  +   + +P+ RIQNTI+G+V+Y A           +DN+++P RA   L+  LA  LG+MR
Sbjct:  663 VHPLKVALILTICALFVLVGYLSDKVAAGAWVGVTAGFIVSEDSSSAAVTSNLRLIGSVVGAMYGWFLTELVNNDAARKLAAIGLPPWVAFCAFFKNSKSHGYAAIVSAFTAVIIVLGTFNASAVGSVAPLTRIQNTILGLVIYMAXXXXXXXXXXAVDNLVFPVRAKVLLRGELAEALGLMR 845          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347487 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835ZI34_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDY4_9STRA2.110e-16935.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQ15_9STRA4.300e-1635.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 646..666

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:1079491..1099202 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347487mRNA_3799Tribonema minus UTEX_B_3156 mRNAContig_12 1079146..1099202 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347487|estExt_Genemark1.C_Ctg_120125 ID=Trimin1|347487|estExt_Genemark1.C_Ctg_120125|Name=jgi.p|Trimin1|347487|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=822bp
MALDGGSKPKFRAESEFRRGLEGGLRTALAALIHLLWMEIGPYPHPVLFI
GTIVAVLATRDTAGATIAIHLVAKNSNLGTGLCIFFFTHLLLRRRRLDIV
AKRLRGIVEGGICALLASLFPYPRLAIRESVHRAQYVCYLMHRSMDACVD
GFIAGRDERKLSKVRLLIEQASMRLNLKHIKELNTACRMELTVLCWGQAG
ALVPLEILDNVTKGLLALKNDAEQEAFVAHLTPRLRDVKAQTAEASGDWI
AGFKTASSRPPPPSHAVTATSVAAVGKGSVSVAVCKDVRHAEGGSYGERL
SPVLLAVARSIDKLVQDYQRARLHILYGRNDPNEKAVWESFEGSVSYQGG
LQDDDVADSLHDGGTPLPSPPAPHLFAAGTAQKDARIIFEETPIGFDRGI
HDKVAADWARHGYRGPFARGCFMSNLVTFSVMLARLVDMEVALERNRGLS
AFDKLKVAVCAMAADTWEALSPFIAFGSQDATSLHCVKVAGILTAASLFT
LVPELSVKFYPGAWVAFSCGVILAEDTGSAVAMGSQRLLGSPTHGYAAVV
AAFTAVLIMVGIFTPAVHQAYSPVVRIQNTIIGVVLYFALDNIIWPARAI
TALQRHLAGGLGVMRKEAVHSAAEGLANAAPIPPPLHLIPLPPVALGGLK
QVADSLEHQAKRAEQSFFTSCTDELWSAEVKQRSGIMTRVGALLRIARMS
LQDAEDIFSAPPQPTCADLFGMQVRNACAPTVTKEGRVQQAQRLLQLQVE
AELLHEAIDQDMVTLMTIGPPAGQAPQTSVQFALRFTTTTFSVLRLHKGL
LTLGHAITDLLEREARIFYYT*
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