Trimin1|347481|estExt_Genemark1.C_Ctg_120112 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347481
Unique NameTrimin1|347481|estExt_Genemark1.C_Ctg_120112
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length386
Homology
BLAST of jgi.p|Trimin1|347481 vs. uniprot
Match: A0A835ZF51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF51_9STRA)

HSP 1 Score: 655 bits (1689), Expect = 1.220e-235
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0
Query:    1 MSSWCCRESTGMVPSLPDELETELRQILHYYPGTHYTCLMDAAGRRQGGSSLTIGAVLPHPLVTGSFTSDDVLDAPPDKFCTAVSSLHNAAVQFARTLDQMGCSVMHIAGDQHLFSCYEVVDKSQPGLVNPWILAFYTTSVDGVPVSAIDTRDADEGVKKIVAALESMLAGVMTPPANSSPPISTSALLHHAARADLPSTAARSTARCXXXXXXXXXXXALLLLLLLSAAARSGWNPRDACGRRFRAPPFRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXREGAAALGCAVPAGALHAYCALALWDTAAAALKLRGETAAPPLEAHEAAARRSRRTTAAPSAVVISVVRLHNTAALAFAAPQEARPAMITSELSAGREKAQMIGI 385
            MSSWCCRESTGMVPSLPDELETELRQILHYYPGTHYTCLMDAAGRRQGGSSLTIGAVLPHPLVTGSFTSDDVLDAPPDKFCTAVSSLHNAAVQFARTLDQMGCSVMHIAGDQHLFSCYEVVDKSQPGLVNPWILAFYTTSVDGVPVSAIDTRDADEGVKKIVAALESMLAGVMTPPANSSPPISTSALLHHAARADLPSTAARSTARCXXXXXXXXXXXALLLLLLLSAAARSGWNPRDACGRRFRAPPFRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXREGAAALGCAVPAGALHAYCALALWDTAAAALKLRGETAAPPLEAHEAAARRSRRTTAAPSAVVISVVRLHNTAALAFAAPQEARPAMITSELSAGREKAQMIGI
Sbjct:    1 MSSWCCRESTGMVPSLPDELETELRQILHYYPGTHYTCLMDAAGRRQGGSSLTIGAVLPHPLVTGSFTSDDVLDAPPDKFCTAVSSLHNAAVQFARTLDQMGCSVMHIAGDQHLFSCYEVVDKSQPGLVNPWILAFYTTSVDGVPVSAIDTRDADEGVKKIVAALESMLAGVMTPPANSSPPISTSALLHHAARADLPSTAARSTARCXXXXXXXXXXXALLLLLLLSAAARSGWNPRDACGRRFRAPPFRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXREGAAALGCAVPAGALHAYCALALWDTAAAALKLRGETAAPPLEAHEAAARRSRRTTAAPSAVVISVVRLHNTAALAFAAPQEARPAMITSELSAGREKAQMIGI 385          
BLAST of jgi.p|Trimin1|347481 vs. uniprot
Match: F0VYZ9_9STRA (Uncharacterized protein AlNc14C1G146 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VYZ9_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.390e-9
Identity = 53/179 (29.61%), Postives = 80/179 (44.69%), Query Frame = 0
Query:    1 MSSWCC-----RESTGMVPSLPDELETELRQILHYYPGTHYTCLMDAAGRRQGGSSLTIGAVLPHPLVTGSFTSDDVLDAPPDKFCTAVSSLHNAAVQFARTLDQMGCSVMHIAGDQHLFSCYEVVDKSQPGLVNPWILAFYTTSVDGVPVSAIDTRDADEGVKKIVAALESMLAGVMT 174
            M S CC     R+S G           +L ++   +PGT Y CL+D             G V+     T   T         ++F   V  L  AA+QFA TL+QM   ++HI GD  +FSCY + D++        +LAFY+   D V +   D  +AD+ ++ I   L+ ++  V T
Sbjct:    1 MRSLCCFRRHQRDSMGK------RYREQLDKVKDVFPGTSYVCLLDGEN----------GNVIAQSEETNPNT---------EEFARFVRMLRKAAMQFAETLNQMDSQILHIKGDDTMFSCYGL-DRT--------VLAFYSQLPD-VEMELFDYTEADKNLETINLELDKLVRDVKT 144          
BLAST of jgi.p|Trimin1|347481 vs. uniprot
Match: A0A0H5QGE2_9EUKA (Uncharacterized protein (Fragment) n=2 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QGE2_9EUKA)

HSP 1 Score: 63.2 bits (152), Expect = 3.160e-8
Identity = 47/163 (28.83%), Postives = 76/163 (46.63%), Query Frame = 0
Query:    3 SWCCRESTGMVPSLPDELETELRQILHYYPGTHYTCLMDAAGRRQGGSSLTIGAVLPHPLVTGSFTSDDVLDAPPDKFCTAVSSLHNAAVQFARTLDQMGCSVMHIAGDQHLFSCYEVVDKSQPGLVNPWILAFYTTSVDGVPVSAIDTRDADEGVKKIVAAL 165
            S CCR S G    +  +++ +L++I   +P T  +C++  +G             L    + G+    D L  P       ++SL  AA QF  TL+   C ++HI G+  +FSCYE  D          +LAFY+ +++G      DT DAD  +  I++ L
Sbjct:   29 SMCCRRSNGFSLQVMKQIQGKLKEIEMVFPETTASCILSQSGE------------LIAQQIKGNNPRVDDLVLP-------IASLKKAAEQFGSTLNAAKCPILHIRGNNVMFSCYEFGDN---------LLAFYS-NLNGKETE-YDTTDADTRMSIIISEL 161          
BLAST of jgi.p|Trimin1|347481 vs. uniprot
Match: A0A8K1C6G3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6G3_PYTOL)

HSP 1 Score: 57.0 bits (136), Expect = 3.460e-6
Identity = 44/141 (31.21%), Postives = 63/141 (44.68%), Query Frame = 0
Query:   21 ETELRQILHYYPGTHYTCLMDAAGRRQGGSSLTIGAVLPHPLVTGSFTSDDVLDAPPDKFCTAVSSLHNAAVQFARTLDQMGCSVMHIAGDQHLFSCYEVVDKSQPGLVNPWILAFYTTSVDGVPVSAIDTRDADEGVKKI 161
            + +  +I   YPGT Y CL++AA       S  I A    P+V              ++    + +L  AA QFA TL Q+   V+H+ GD  +FSC+              ILAFYT  + GV +   D  +AD+ V  I
Sbjct:   23 QEQFERIRGVYPGTDYACLLNAA-------SGEIIAQTEIPVVN------------TEELARTIVTLKRAAQQFATTLTQVESQVVHVKGDDRMFSCFGGEGT---------ILAFYT-QMPGVNLELFDCNEADKTVHMI 134          
BLAST of jgi.p|Trimin1|347481 vs. uniprot
Match: A0A5D6Y3Y3_9STRA (Foie-gras_1 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3Y3_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 8.700e-6
Identity = 43/163 (26.38%), Postives = 75/163 (46.01%), Query Frame = 0
Query:    1 MSSWCCRESTGMVPSLPDELETELRQILHYYPGTHYTCLMDAAGRRQGGSSLTIGAVLPHPLVTGSFTSDDVLDAPPDKFCTAVSSLHNAAVQFAR--TLDQMGCSVMHIAGDQHLFSCYEVVDKSQPGLVNPWILAFYTTSVDGVPVSAIDTRDADEGVKKI 161
            M S C   S     +     + +  +I + YPGT+Y CL+++    + G  +                  +V     ++F   + +L  AA+QF    TL+Q+   V+H+ GD  +FSCY   +K+        ILAFY+  + GV +   D  +AD+G++ +
Sbjct: 1164 MGSLCACFSRRRPDNAAQLYQEQFDRIKNVYPGTNYVCLLNS----ENGEMIA---------------QSEVATVNAEEFTRTIITLKRAALQFGEGATLNQIESQVVHVKGDDRMFSCYGS-EKT--------ILAFYS-EMPGVDLELFDCSEADKGIESV 1297          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347481 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835ZF51_9STRA1.220e-235100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0VYZ9_9STRA2.390e-929.61Uncharacterized protein AlNc14C1G146 n=1 Tax=Albug... [more]
A0A0H5QGE2_9EUKA3.160e-828.83Uncharacterized protein (Fragment) n=2 Tax=Spongos... [more]
A0A8K1C6G3_PYTOL3.460e-631.21Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y3Y3_9STRA8.700e-626.38Foie-gras_1 domain-containing protein n=1 Tax=Pyth... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:885551..891793 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347481mRNA_3786Tribonema minus UTEX_B_3156 mRNAContig_12 885551..891944 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347481|estExt_Genemark1.C_Ctg_120112 ID=Trimin1|347481|estExt_Genemark1.C_Ctg_120112|Name=jgi.p|Trimin1|347481|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=386bp
MSSWCCRESTGMVPSLPDELETELRQILHYYPGTHYTCLMDAAGRRQGGS
SLTIGAVLPHPLVTGSFTSDDVLDAPPDKFCTAVSSLHNAAVQFARTLDQ
MGCSVMHIAGDQHLFSCYEVVDKSQPGLVNPWILAFYTTSVDGVPVSAID
TRDADEGVKKIVAALESMLAGVMTPPANSSPPISTSALLHHAARADLPST
AARSTARCAALRCTALECCALLLLLLLSAAARSGWNPRDACGRRFRAPPF
RSRRRRTFAAPPPVMSAAMCAHAAAVAGGGREGAAALGCAVPAGALHAYC
ALALWDTAAAALKLRGETAAPPLEAHEAAARRSRRTTAAPSAVVISVVRL
HNTAALAFAAPQEARPAMITSELSAGREKAQMIGI*
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