Trimin1|347480|estExt_Genemark1.C_Ctg_120110 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347480
Unique NameTrimin1|347480|estExt_Genemark1.C_Ctg_120110
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length855
Homology
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BLAST of jgi.p|Trimin1|347480 vs. uniprot
Match: A0A835ZGU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGU2_9STRA)

HSP 1 Score: 1363 bits (3529), Expect = 0.000e+0
Identity = 854/854 (100.00%), Postives = 854/854 (100.00%), Query Frame = 0 
Query:    1 MADGSDSKVAEAAELAAVLAQFDSQVADGTALWTQLEQLSQALPHHHSAALESSAAREKEELMAAKLLGEADLDQHSAHMRWADDALVSVFGTDAGLHTLQITRRLRASMQRTDLKPFLAAALDPSQPPSLHAQHSLYDTTDPLWALVTGAGEGGAGRANRCHWLLRQPVAAALVQCVGAGGTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAASQCXXXXXXXXXQGASGLLVDLLRWTRDPDDAAGLMLEVLMEVDAAQRGXXXXXXDASTVVLRYADLVARCCAIGDKVRSAEEANKTPDNDVDPRARPPLRVHETPWPFVVLVSTQESGTLEIXXXXXXXXXXXXXLLPFVAAAPSGARFILASHSPRAPRAVPPDGIDGLYPNASTAEYSRTSGLSASLLELADVGARGTALGTGALRATAEVLALAAGAQQQQQRERYNVAAPQRRSARQHSFVAPLCAEEAWRLLGVGARMLARCGQSDGVLFMRGTQPSEKLALAQRLLSIAASYMKMGVGAGQEGARLAGMSAVADFARSSAWALQMVLEDNALCHAWLNLNGGGGGMSAALKATVLHSVARVFGPPTLAPTPPLSPVPEAEXXXXXXXXXXXXXXXXXXAERTGEMISDASETSAADIEVEVEEAPAPDARVGRSDAADTELSELRHRLWLRLGGCNDRAQAHAQQQXXXXXXXXXXXXXXXXPSASPVGLLMALVRLPVAETRHAAMDVLRCAAHQRGGWALQDMMAYGGLVEFLASGMGTDVDGVGASAXXXXXXXXXXXXXXXXXXXXXXQEGMEWKFSLVESIMRCPHRAVLGQPTLDLLERILRNGPFGPPITLPFSAPQ 854
            MADGSDSKVAEAAELAAVLAQFDSQVADGTALWTQLEQLSQALPHHHSAALESSAAREKEELMAAKLLGEADLDQHSAHMRWADDALVSVFGTDAGLHTLQITRRLRASMQRTDLKPFLAAALDPSQPPSLHAQHSLYDTTDPLWALVTGAGEGGAGRANRCHWLLRQPVAAALVQCVGAGGTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAASQCXXXXXXXXXQGASGLLVDLLRWTRDPDDAAGLMLEVLMEVDAAQRGXXXXXXDASTVVLRYADLVARCCAIGDKVRSAEEANKTPDNDVDPRARPPLRVHETPWPFVVLVSTQESGTLEIXXXXXXXXXXXXXLLPFVAAAPSGARFILASHSPRAPRAVPPDGIDGLYPNASTAEYSRTSGLSASLLELADVGARGTALGTGALRATAEVLALAAGAQQQQQRERYNVAAPQRRSARQHSFVAPLCAEEAWRLLGVGARMLARCGQSDGVLFMRGTQPSEKLALAQRLLSIAASYMKMGVGAGQEGARLAGMSAVADFARSSAWALQMVLEDNALCHAWLNLNGGGGGMSAALKATVLHSVARVFGPPTLAPTPPLSPVPEAEXXXXXXXXXXXXXXXXXXAERTGEMISDASETSAADIEVEVEEAPAPDARVGRSDAADTELSELRHRLWLRLGGCNDRAQAHAQQQXXXXXXXXXXXXXXXXPSASPVGLLMALVRLPVAETRHAAMDVLRCAAHQRGGWALQDMMAYGGLVEFLASGMGTDVDGVGASAXXXXXXXXXXXXXXXXXXXXXXQEGMEWKFSLVESIMRCPHRAVLGQPTLDLLERILRNGPFGPPITLPFSAPQ
Sbjct:    1 MADGSDSKVAEAAELAAVLAQFDSQVADGTALWTQLEQLSQALPHHHSAALESSAAREKEELMAAKLLGEADLDQHSAHMRWADDALVSVFGTDAGLHTLQITRRLRASMQRTDLKPFLAAALDPSQPPSLHAQHSLYDTTDPLWALVTGAGEGGAGRANRCHWLLRQPVAAALVQCVGAGGTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAASQCXXXXXXXXXQGASGLLVDLLRWTRDPDDAAGLMLEVLMEVDAAQRGXXXXXXDASTVVLRYADLVARCCAIGDKVRSAEEANKTPDNDVDPRARPPLRVHETPWPFVVLVSTQESGTLEIXXXXXXXXXXXXXLLPFVAAAPSGARFILASHSPRAPRAVPPDGIDGLYPNASTAEYSRTSGLSASLLELADVGARGTALGTGALRATAEVLALAAGAQQQQQRERYNVAAPQRRSARQHSFVAPLCAEEAWRLLGVGARMLARCGQSDGVLFMRGTQPSEKLALAQRLLSIAASYMKMGVGAGQEGARLAGMSAVADFARSSAWALQMVLEDNALCHAWLNLNGGGGGMSAALKATVLHSVARVFGPPTLAPTPPLSPVPEAEXXXXXXXXXXXXXXXXXXAERTGEMISDASETSAADIEVEVEEAPAPDARVGRSDAADTELSELRHRLWLRLGGCNDRAQAHAQQQXXXXXXXXXXXXXXXXPSASPVGLLMALVRLPVAETRHAAMDVLRCAAHQRGGWALQDMMAYGGLVEFLASGMGTDVDGVGASAXXXXXXXXXXXXXXXXXXXXXXQEGMEWKFSLVESIMRCPHRAVLGQPTLDLLERILRNGPFGPPITLPFSAPQ 854
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347480 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZGU2_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 599..620
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 599..661

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:866563..880090 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347480mRNA_3784Tribonema minus UTEX_B_3156 mRNAContig_12 866476..880090 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347480|estExt_Genemark1.C_Ctg_120110 ID=Trimin1|347480|estExt_Genemark1.C_Ctg_120110|Name=jgi.p|Trimin1|347480|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=855bp
MADGSDSKVAEAAELAAVLAQFDSQVADGTALWTQLEQLSQALPHHHSAA
LESSAAREKEELMAAKLLGEADLDQHSAHMRWADDALVSVFGTDAGLHTL
QITRRLRASMQRTDLKPFLAAALDPSQPPSLHAQHSLYDTTDPLWALVTG
AGEGGAGRANRCHWLLRQPVAAALVQCVGAGGTAASQPVAAALVQCVGAG
GTAASQHVAAALVQCVGADGMAASQCVGVGGTAALQGASGLLVDLLRWTR
DPDDAAGLMLEVLMEVDAAQRGGGGGGGDASTVVLRYADLVARCCAIGDK
VRSAEEANKTPDNDVDPRARPPLRVHETPWPFVVLVSTQESGTLEIVVVS
AQESGTLEILLPFVAAAPSGARFILASHSPRAPRAVPPDGIDGLYPNAST
AEYSRTSGLSASLLELADVGARGTALGTGALRATAEVLALAAGAQQQQQR
ERYNVAAPQRRSARQHSFVAPLCAEEAWRLLGVGARMLARCGQSDGVLFM
RGTQPSEKLALAQRLLSIAASYMKMGVGAGQEGARLAGMSAVADFARSSA
WALQMVLEDNALCHAWLNLNGGGGGMSAALKATVLHSVARVFGPPTLAPT
PPLSPVPEAEGPPTLAPTPPLSPVAEAEAERTGEMISDASETSAADIEVE
VEEAPAPDARVGRSDAADTELSELRHRLWLRLGGCNDRAQAHAQQQGAAA
AAAAAPAAAAAAPSASPVGLLMALVRLPVAETRHAAMDVLRCAAHQRGGW
ALQDMMAYGGLVEFLASGMGTDVDGVGASAMAYDGLVVFLASGMDTDVDV
GGQEGMEWKFSLVESIMRCPHRAVLGQPTLDLLERILRNGPFGPPITLPF
SAPQ*
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