Trimin1|347379|estExt_Genemark1.C_Ctg_110075 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347379
Unique NameTrimin1|347379|estExt_Genemark1.C_Ctg_110075
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1210
Homology
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BLAST of jgi.p|Trimin1|347379 vs. uniprot
Match: A0A835ZCL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL5_9STRA)

HSP 1 Score: 306 bits (783), Expect = 7.380e-83
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 
Query: 1058 VPYNSSGTVMSGPGSNAEVSTGTATSDVTWIAFSTNRWGWNGQIRSGQLSGYMLAGAGGADVTKATRLGTFVLYHSAGSNVVTGSVSLYSATPPTLTSNLVMACRCNALVDSTSFGRDYIPQSSLTALSVPISPIDCPHIWCVVHFDAQYNK 1209
            VPYNSSGTVMSGPGSNAEVSTGTATSDVTWIAFSTNRWGWNGQIRSGQLSGYMLAGAGGADVTKATRLGTFVLYHSAGSNVVTGSVSLYSATPPTLTSNLVMACRCNALVDSTSFGRDYIPQSSLTALSVPISPIDCPHIWCVVHFDAQYNK
Sbjct: 1058 VPYNSSGTVMSGPGSNAEVSTGTATSDVTWIAFSTNRWGWNGQIRSGQLSGYMLAGAGGADVTKATRLGTFVLYHSAGSNVVTGSVSLYSATPPTLTSNLVMACRCNALVDSTSFGRDYIPQSSLTALSVPISPIDCPHIWCVVHFDAQYNK 1209
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347379 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZCL5_9STRA7.380e-83100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006970PT repeatPFAMPF04886PTcoord: 108..141
e-value: 8.2E-8
score: 31.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 950..1074
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..1074
NoneNo IPR availablePANTHERPTHR36489PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATEDcoord: 77..248
coord: 372..536
coord: 240..395
coord: 649..801
coord: 510..670
coord: 786..939
coord: 915..1077

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_11contigContig_11:644618..655670 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347379mRNA_4764Tribonema minus UTEX_B_3156 mRNAContig_11 644618..655909 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347379|estExt_Genemark1.C_Ctg_110075 ID=Trimin1|347379|estExt_Genemark1.C_Ctg_110075|Name=jgi.p|Trimin1|347379|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1210bp
MSSTSFKITAIPSNWASISAVFSKAGTGYCTYRPGLLNTTYYTPCKPSTC
YALSHLTLCGVKATPRPTATPTTPQDTTSAPTPKPTSGPTANPTANPTAN
PTASPTGTANPTAQPTASPTANPTANPTAQPTAKPTAEPTANPTAQPTAK
PTAEPSSAPTAKPTAEPTANPTASPTAKPTSEPTAKPTSEPTAKPTAEPT
AKPTAEPTAKPTAEPTAEPTAEPTAKPTAEPTAEPTAKPTAEPTAEPTSK
PTAEPTAEPTAKPTAEPTAEPTSKPTAEPTAEPTAEPTAKPTAEPTAEPT
AKPTAEPTAEPTAEPTAKPTAEPTAEPTAEPTAKPTAEPTAEPTAKPTAE
PTAEPTAKPTAEPTAEPTAKPTAEPTAEPTAKPTAEPTAEPTAKPTAEPT
AEPTAKPTAEPTAEPTAKPTAEPTAEPTAEPTAMPTAEPTAAPTAEPTAK
PTAEPTAEPTAEPTVKPTAEPTAKPTAEPTAEPTAEPTAKPTAEPTAEPT
AKPTAEPTAEPTAKPTAEPTAKPTAEPTAKPTAEPTAKPTAEPTAEPTAE
PTAKPTAEPTAEPTAKPTAEPTAEPTAEPTAKPTAEPTAEPTAKPTAEPT
AEPTAEPSAKPTSEPTAEPTAKPTAEPTAEPTAEPTARPTAEPTAEPTAK
PTAEPTAEPTAEPTAKPTAEPTAKPTAEPTAKPTAEPTAEPTAEPTAKPT
AEPTAEPTAKPTAEPTAEPTAEPTAKPTAEPTAKPTAEPTARPTAEPTAE
PTAEPTAKPTAEPTAEPTAKPTAEPTAEPTAEPTAKPTAEPTAKPTAEPT
SKPTAEPTAEPTAEPTAKPTAEPTAEPTAKPTAEPTAEPTAEPTAKPTAE
PTAEPTAKPTAEPTAEPTAEPTAKPAAEPTAEPTAKPTAEPTAEPTAEPT
AKPTAEPTAKPTAEPTAEPTAEPTAKPTAEPTAEPTAKPTAEPTAEPTAE
PTAKPTSEPTAKPTSEPTAKPTSEPTAKPTSEPTAKPTSEPTAKPTAKPT
AEPTASPTANPTAKPTASPTATPTAQPTAKPTAVPTAAPTGTPTAQPTRT
PTATPTPVPYNSSGTVMSGPGSNAEVSTGTATSDVTWIAFSTNRWGWNGQ
IRSGQLSGYMLAGAGGADVTKATRLGTFVLYHSAGSNVVTGSVSLYSATP
PTLTSNLVMACRCNALVDSTSFGRDYIPQSSLTALSVPISPIDCPHIWCV
VHFDAQYNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006970PT