Trimin1|347375|estExt_Genemark1.C_Ctg_110068 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347375
Unique NameTrimin1|347375|estExt_Genemark1.C_Ctg_110068
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length323
Homology
BLAST of jgi.p|Trimin1|347375 vs. uniprot
Match: A0A836CQG7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQG7_9STRA)

HSP 1 Score: 580 bits (1495), Expect = 3.450e-208
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
Query:    1 MHIEQGGADDAADEFEVQFAELQSALPSFEWADQTQPVRLRRLLSDAQMDQVHNAAQELKGSCGRSVRDADGVYKVGEDGTWRTTYLHTGHAFQRALPELYAQLIAAAYEADRRENWGLLAGRDVRARCIEYHEVEPGGALADRDHRDTGSLVTIDVMLADPGGGDFSGGHFHAPVTLRGASSTSTSNRDAHEQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHHDIQHAQTRAIGDGTAHVHTLPRSGGSADGSTQQFTGGTEGGQVEFTKGDAVGEERQCAHRCVRPFGACGYTAAYSKLEALFKSSFGGAGYEQ 322
            MHIEQGGADDAADEFEVQFAELQSALPSFEWADQTQPVRLRRLLSDAQMDQVHNAAQELKGSCGRSVRDADGVYKVGEDGTWRTTYLHTGHAFQRALPELYAQLIAAAYEADRRENWGLLAGRDVRARCIEYHEVEPGGALADRDHRDTGSLVTIDVMLADPGGGDFSGGHFHAPVTLRGASSTSTSNRDAHEQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHHDIQHAQTRAIGDGTAHVHTLPRSGGSADGSTQQFTGGTEGGQVEFTKGDAVGEERQCAHRCVRPFGACGYTAAYSKLEALFKSSFGGAGYEQ
Sbjct:    1 MHIEQGGADDAADEFEVQFAELQSALPSFEWADQTQPVRLRRLLSDAQMDQVHNAAQELKGSCGRSVRDADGVYKVGEDGTWRTTYLHTGHAFQRALPELYAQLIAAAYEADRRENWGLLAGRDVRARCIEYHEVEPGGALADRDHRDTGSLVTIDVMLADPGGGDFSGGHFHAPVTLRGASSTSTSNRDAHEQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHHDIQHAQTRAIGDGTAHVHTLPRSGGSADGSTQQFTGGTEGGQVEFTKGDAVGEERQCAHRCVRPFGACGYTAAYSKLEALFKSSFGGAGYEQ 322          
BLAST of jgi.p|Trimin1|347375 vs. uniprot
Match: A0A7S2WPM9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WPM9_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.120e-28
Identity = 67/140 (47.86%), Postives = 89/140 (63.57%), Query Frame = 0
Query:   22 LQSALPSFEWADQTQPVRLRRLLSDAQMDQVHNAAQELKGSCGRSVRDADGVYKVGEDGTWRTTYLHTGHAFQRALPELYAQLIAAAYEADRRENWGLLAGR--DVRARCIEYHEVEPGGALADRDHRDTGSLVTIDVML 159
            + S LPS   A + Q    R+LLS  ++ +V +  ++ KGSCG + RDA G  K+  D TW+T+YLHT H  Q+  PE+  +L+AAA+EAD ++ WGLL G   D R R IE H V   GALAD  H D GSLVT+DVM+
Sbjct:   64 IDSELPSPGDAQKMQLYVKRKLLSSGEVKEVVDFERQHKGSCGHTRRDAQGFRKM--DSTWQTSYLHTNHLMQKYKPEIVDKLVAAAFEADLQQGWGLLNGDKDDFRIRVIELHSVGVDGALADEKHFDQGSLVTVDVMM 201          
BLAST of jgi.p|Trimin1|347375 vs. uniprot
Match: A0A812YAP9_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812YAP9_9DINO)

HSP 1 Score: 97.1 bits (240), Expect = 3.780e-21
Identity = 49/133 (36.84%), Postives = 73/133 (54.89%), Query Frame = 0
Query:   29 FEWADQTQPVRLRRLLSDAQMDQVHNAAQELKGSCGRSVRDADGVYKVGEDGTWRTTYLHTGHAFQRALPELYAQLIAAAYEADRRENWGLLAGRDVRARCIEYHEVEPGGALADRDHRDTGSLVTIDVMLAD 161
            FE A   +  R+   LS+ ++  +     E++  CG   +   G  +     +W TT+LHT   FQ+  PEL +++ A A + +  E W +    +   RCIE+HE   GG LAD  HRDTGSLVTID+ML++
Sbjct:    3 FEKAQAARARRIPNFLSEEEVQHLERVVLEMRAVCGLQAKSRRGELRSTVGASWTTTFLHTNGEFQKREPELVSRIRALAAQVNSEERWSMPV-EEGNLRCIEHHEYLNGGGLADHHHRDTGSLVTIDLMLSE 134          
BLAST of jgi.p|Trimin1|347375 vs. uniprot
Match: A0A813CZY3_9DINO (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813CZY3_9DINO)

HSP 1 Score: 99.0 bits (245), Expect = 4.520e-21
Identity = 55/158 (34.81%), Postives = 82/158 (51.90%), Query Frame = 0
Query:   13 DEFEVQFAELQSALPS---------FEWADQTQPVRLRRLLSDAQMDQVHNAAQELKGSCGRSVRDADGVYKVGEDGTWRTTYLHTGHAFQRALPELYAQLIAAAYEADRRENWGLLAGRDVRARCIEYHEVEPGGALADRDHRDTGSLVTIDVMLAD 161
            +EFEV      + LP+         FE A   +  R+   LS+ ++  +     E++  CG   +   G  +     +W TT+LHT   FQ+  PEL +++ A A + +  E W +    +   RCIE+HE   GG LAD  HRDTGSLVTID+ML++
Sbjct:   28 EEFEVSLRPAATQLPAVAIGRGTMPFEKAQAARARRIPNFLSEEEVQHLERVVLEMRAVCGLQAKTRRGELRSTVGASWTTTFLHTNGEFQKREPELISRIRALAAQVNSEERWSMPV-EEGNLRCIEHHEYLNGGGLADHHHRDTGSLVTIDLMLSE 184          
BLAST of jgi.p|Trimin1|347375 vs. uniprot
Match: A0A7S1SDG7_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SDG7_ALECA)

HSP 1 Score: 97.8 bits (242), Expect = 2.320e-20
Identity = 63/144 (43.75%), Postives = 78/144 (54.17%), Query Frame = 0
Query:   40 LRRLLSDAQMDQVHNAAQELKGSCGRSVRDADGVYKVGEDGTWRTTYLHTGHAFQRALPELYAQLIAAAYEADRRENWGLL--------AGRDVRARCIEYHEVEPGGALADRDHRDTGSLVTIDVMLADPGGGDFSGGHFHAP 175
            LR LL    +  +   A+    + G   R+ DG + +   GTW T YLHTG  FQ+  P L+ +L  AA   DR + WGLL         GR V  R IE H V  GG+LAD  H D+GSL T+DVMLA+PG  DF GG F  P
Sbjct:    8 LRGLLKPEDITALLREAELKAQNLGSVSRNGDGTHCL--QGTWTTHYLHTGAWFQKKFPSLFERLANAAVAVDR-DRWGLLDAAPCSARLGRPV-PRTIELHTVHAGGSLADPTHFDSGSLYTLDVMLAEPGA-DFDGGGFQTP 146          
BLAST of jgi.p|Trimin1|347375 vs. uniprot
Match: A0A1Q9DT76_SYMMI (Uncharacterized protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DT76_SYMMI)

HSP 1 Score: 100 bits (249), Expect = 2.670e-20
Identity = 58/165 (35.15%), Postives = 86/165 (52.12%), Query Frame = 0
Query:   13 DEFEVQFAELQSALPS---------FEWADQTQPVRLRRLLSDAQMDQVHNAAQELKGSCGRSVRDADGVYKVGEDGTWRTTYLHTGHAFQRALPELYAQLIAAAYEADRRENWGLLAGRDVRARCIEYHEVEPGGALADRDHRDTGSLVTIDVMLADPG-GGDF 167
            +EFEV      + LP+         FE A   +  R+   LS+ ++  +     E++  CG   +   G  +     +W TT+LHT   FQ+  PEL +++ A A + +  E W +    +   RCIE+HE   GG LAD  HRDTGSLVTID+ML++   GG+F
Sbjct:  141 EEFEVSLRPAATQLPAVAIGRGTMPFEKAQAARARRIPNFLSEEEVQHLERVVLEMRAVCGLQAKTRRGELRSTVGASWTTTFLHTNGEFQKREPELISRIRALAAQVNSEERWSMPV-EEGNLRCIEHHEYLNGGGLADHHHRDTGSLVTIDLMLSEASSGGEF 304          
BLAST of jgi.p|Trimin1|347375 vs. uniprot
Match: A0A7S2G6I8_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2G6I8_9DINO)

HSP 1 Score: 96.3 bits (238), Expect = 6.510e-20
Identity = 54/103 (52.43%), Postives = 62/103 (60.19%), Query Frame = 0
Query:   80 GTWRTTYLHTGHAFQRALPELYAQLIAAAYEADRRENWGLLAGRDVRARC-------IEYHEVEPGGALADRDHRDTGSLVTIDVMLADPGGGDFSGGHFHAP 175
            GTW T YLHTG  FQR  P+L+ +L  AA   DR + WGLL      AR        IE H V  GG+LAD  H D+GSL T+DVMLA+PG  DF GGHF  P
Sbjct:    7 GTWTTHYLHTGAWFQRKFPDLFQRLANAAVAVDR-DRWGLLDAAPCYARLGRPAPRTIELHTVHAGGSLADPTHFDSGSLWTLDVMLAEPGE-DFEGGHFQTP 107          
BLAST of jgi.p|Trimin1|347375 vs. uniprot
Match: F0YC04_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC04_AURAN)

HSP 1 Score: 93.6 bits (231), Expect = 1.750e-18
Identity = 52/97 (53.61%), Postives = 63/97 (64.95%), Query Frame = 0
Query:   80 GTWRTTYLHTGHAFQRALPELYAQLIAAAYEADRRENWGL-LAGRDVRARCIEYHEVEPGGALADRDHRDTGSLVTIDVMLADPGGGDFSGGHFHAP 175
            G W T YL  G AFQR LP L ++L+ AA  A   +  GL L G D+R RC+E+HE+  GGALAD  H D+GS++TIDVMLA PG  DF GG    P
Sbjct:   86 GAWTTVYLSCGRAFQRELPALASRLVRAAKRAAA-DQMGLDLRGVDLRVRCVEHHEMAAGGALADECHYDSGSVLTIDVMLAAPGD-DFDGGALWFP 180          
BLAST of jgi.p|Trimin1|347375 vs. uniprot
Match: A0A812QW67_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812QW67_9DINO)

HSP 1 Score: 87.4 bits (215), Expect = 6.240e-17
Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 0
Query:   59 LKGSCGRSVRDADGVYKVGEDGTWRTTYLHTGHAFQRALPELYAQLIAAAYEADRRENWGLLAGRDVRARCIEYHEVEPGGALADRDHRDTGSLVTIDVMLADPG-GGDF 167
            ++  CG   +   G  +     +W TT+LHT   FQ+  PEL +++ A A + +  E W +    +   RCIE+HE   GG LAD  HRDTGSLVTID+ML++   GG+F
Sbjct:    1 MRAVCGLQAKTRRGELRSTVGASWTTTFLHTNGEFQKREPELVSRIRALAAKVNCEEGWSMPV-EEGNLRCIEHHEYLNGGGLADHHHRDTGSLVTIDLMLSEASSGGEF 109          
BLAST of jgi.p|Trimin1|347375 vs. uniprot
Match: A0A8J5X3S3_DIALT (P4Hc domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X3S3_DIALT)

HSP 1 Score: 89.7 bits (221), Expect = 6.980e-17
Identity = 64/172 (37.21%), Postives = 84/172 (48.84%), Query Frame = 0
Query:    9 DDAADEFEVQFAELQSALP----SFEWADQTQPVRLRRLLSDAQMDQVHNAAQELKGSCGRSVRDADGVYKV-GEDGTWRTTYLHTGHAFQRALPELYAQLIAAAYEADRRENWGLLAG---RDVRARCIEYHEVEPGGALADRDHRDTGSLVTIDVMLADPGGGDFSGGHF 172
            D+ A E   ++ EL SA P    S E A  ++ V L  LL++A +  +   A+    S   +V D          D  WR T+L   H  QR LPE+  +L AA    D  + W   +G     +  RC E H    GG L D +HRD GSLVT+DVML+D G   F GGHF
Sbjct:   58 DERAREDYARYLEL-SATPLHVVSDERAQASEVVALEGLLTEADVHHILELAERTATSDPTAVFDRSSWSGAHARDPHWRVTFLQANHVLQRKLPEIARKLTAAVRAVDAAQRWNATSGIKTAHLGIRCAEVHAQTRGGGLPDPEHRDHGSLVTVDVMLSDAGA--FEGGHF 226          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347375 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A836CQG7_9STRA3.450e-208100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2WPM9_9STRA1.120e-2847.86Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A812YAP9_9DINO3.780e-2136.84Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A813CZY3_9DINO4.520e-2134.81Hypothetical protein n=2 Tax=Symbiodinium TaxID=29... [more]
A0A7S1SDG7_ALECA2.320e-2043.75Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A1Q9DT76_SYMMI2.670e-2035.15Uncharacterized protein n=1 Tax=Symbiodinium micro... [more]
A0A7S2G6I8_9DINO6.510e-2052.43Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]
F0YC04_AURAN1.750e-1853.61Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A812QW67_9DINO6.240e-1740.91Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A8J5X3S3_DIALT6.980e-1737.21P4Hc domain-containing protein n=1 Tax=Diacronema ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..277

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_11contigContig_11:576636..580599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347375mRNA_4757Tribonema minus UTEX_B_3156 mRNAContig_11 576636..580617 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347375|estExt_Genemark1.C_Ctg_110068 ID=Trimin1|347375|estExt_Genemark1.C_Ctg_110068|Name=jgi.p|Trimin1|347375|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=323bp
MHIEQGGADDAADEFEVQFAELQSALPSFEWADQTQPVRLRRLLSDAQMD
QVHNAAQELKGSCGRSVRDADGVYKVGEDGTWRTTYLHTGHAFQRALPEL
YAQLIAAAYEADRRENWGLLAGRDVRARCIEYHEVEPGGALADRDHRDTG
SLVTIDVMLADPGGGDFSGGHFHAPVTLRGASSTSTSNRDAHEQQQQPQQ
QQQQPQQHPQQQPQQQQQQQQQRQRQRDHHDIQHAQTRAIGDGTAHVHTL
PRSGGSADGSTQQFTGGTEGGQVEFTKGDAVGEERQCAHRCVRPFGACGY
TAAYSKLEALFKSSFGGAGYEQ*
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