Trimin1|347337|estExt_Genemark1.C_Ctg_100173 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347337
Unique NameTrimin1|347337|estExt_Genemark1.C_Ctg_100173
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length265
Homology
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BLAST of jgi.p|Trimin1|347337 vs. uniprot
Match: A0A835ZFI5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI5_9STRA)

HSP 1 Score: 392 bits (1007), Expect = 8.960e-136
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0 
Query:    1 MERIVGRLNSANRTSTKAAVAVACAGAGAVLSLMGYRLSRAQARRAAAVEERLALVSLVDTLRAENDILAQQRRALERAIADARAAAAAAEFTHAAERAELLSNAAALEATRAALRDTIEKLSAELATMQGRQAQLLQQIAALQQRPAKGDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPEPPMSPNSRHRLSQQLITDELEILAANPAPPAGRKASGGGFDQQQLERLKASTAAQREAASVAGMGGGSHRGSRGG 264
            MERIVGRLNSANRTSTKAAVAVACAGAGAVLSLMGYRLSRAQARRAAAVEERLALVSLVDTLRAENDILAQQRRALERAIADARAAAAAAEFTHAAERAELLSNAAALEATRAALRDTIEKLSAELATMQGRQAQLLQQIAALQQRPAKGDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPEPPMSPNSRHRLSQQLITDELEILAANPAPPAGRKASGGGFDQQQLERLKASTAAQREAASVAGMGGGSHRGSRGG
Sbjct:    1 MERIVGRLNSANRTSTKAAVAVACAGAGAVLSLMGYRLSRAQARRAAAVEERLALVSLVDTLRAENDILAQQRRALERAIADARAAAAAAEFTHAAERAELLSNAAALEATRAALRDTIEKLSAELATMQGRQAQLLQQIAALQQRPAKGDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPEPPMSPNSRHRLSQQLITDELEILAANPAPPAGRKASGGGFDQQQLERLKASTAAQREAASVAGMGGGSHRGSRGG 264
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347337 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZFI5_9STRA8.960e-136100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..86
NoneNo IPR availableCOILSCoilCoilcoord: 98..146
NoneNo IPR availableGENE3D1.10.287.1490coord: 33..194
e-value: 1.6E-5
score: 26.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_10contigContig_10:1454301..1455095 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347337mRNA_4370Tribonema minus UTEX_B_3156 mRNAContig_10 1454301..1455095 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347337|estExt_Genemark1.C_Ctg_100173 ID=Trimin1|347337|estExt_Genemark1.C_Ctg_100173|Name=jgi.p|Trimin1|347337|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=265bp
MERIVGRLNSANRTSTKAAVAVACAGAGAVLSLMGYRLSRAQARRAAAVE
ERLALVSLVDTLRAENDILAQQRRALERAIADARAAAAAAEFTHAAERAE
LLSNAAALEATRAALRDTIEKLSAELATMQGRQAQLLQQIAALQQRPAKG
DAAAAAAAAAEAAAVAEAAAAAEAAAAAEAAAAAAAQPEPPMSPNSRHRL
SQQLITDELEILAANPAPPAGRKASGGGFDQQQLERLKASTAAQREAASV
AGMGGGSHRGSRGG*
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