Trimin1|347317|estExt_Genemark1.C_Ctg_100133 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347317
Unique NameTrimin1|347317|estExt_Genemark1.C_Ctg_100133
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length327
Homology
BLAST of jgi.p|Trimin1|347317 vs. uniprot
Match: A0A835ZE51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE51_9STRA)

HSP 1 Score: 554 bits (1428), Expect = 7.560e-198
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0
Query:    1 MIVPSMTALLVLVAGQLTTTSAAEANATTSDSASYFTSSTSSWSLEPAGTKYKTKKDSANINLYQDDQDKENCSGTSMSFSVTAENDTYIPDGETAAASTTSYISYDLTTLRQCADGEASSSTYVFNSTSSGYIESVPTGCCSDRVSLWGSAGAFSGPSTSDGAXXXXXXXXXXXXXXXXXXXXXSAQPNVEVTGTGAKFAAALSGTFVLSDTSSWSSSSGGSGANTGKAEDVNCTVEVAMACGGTATLESGETSERCTLSGCTKSTVTEEKEFCATPEDLGSATATGTVKIPSLNINFDLADLPEGVTLRVRAAKYKSEHDTVAV 326
            MIVPSMTALLVLVAGQLTTTSAAEANATTSDSASYFTSSTSSWSLEPAGTKYKTKKDSANINLYQDDQDKENCSGTSMSFSVTAENDTYIPDGETAAASTTSYISYDLTTLRQCADGEASSSTYVFNSTSSGYIESVPTGCCSDRVSLWGSAGAFSGPSTSDGAXXXXXXXXXXXXXXXXXXXXXSAQPNVEVTGTGAKFAAALSGTFVLSDTSSWSSSSGGSGANTGKAEDVNCTVEVAMACGGTATLESGETSERCTLSGCTKSTVTEEKEFCATPEDLGSATATGTVKIPSLNINFDLADLPEGVTLRVRAAKYKSEHDTVAV
Sbjct:    1 MIVPSMTALLVLVAGQLTTTSAAEANATTSDSASYFTSSTSSWSLEPAGTKYKTKKDSANINLYQDDQDKENCSGTSMSFSVTAENDTYIPDGETAAASTTSYISYDLTTLRQCADGEASSSTYVFNSTSSGYIESVPTGCCSDRVSLWGSAGAFSGPSTSDGAXXXXXXXXXXXXXXXXXXXXXSAQPNVEVTGTGAKFAAALSGTFVLSDTSSWSSSSGGSGANTGKAEDVNCTVEVAMACGGTATLESGETSERCTLSGCTKSTVTEEKEFCATPEDLGSATATGTVKIPSLNINFDLADLPEGVTLRVRAAKYKSEHDTVAV 326          
BLAST of jgi.p|Trimin1|347317 vs. uniprot
Match: A0A835ZIJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIJ7_9STRA)

HSP 1 Score: 260 bits (665), Expect = 7.570e-82
Identity = 157/291 (53.95%), Postives = 196/291 (67.35%), Query Frame = 0
Query:   45 LEPAGTKYKTKKDSANINLYQDDQDKENCSGTSMSFSVTAENDTYIPDGET-AAASTTSYISYDLTTLRQCADGEASSSTYVFNSTSSGYIESVPTGCCSDRVSLWGSAGAFSGPSTSDG--AXXXXXXXXXXXXXXXXXXXXXSAQ--PNVEVTGTGAKFAAALSGTFVLSDTSSWSSSSGGSGAN----TGKAEDVNCTVEVAMACGGTATLESGETSERCTLSGCTKSTVTEEKEFCATPEDLGSATATGTVKIPSLNINFDLADLPEGVTLRVRAAKYKSEHDTVAV 326
            ++P GTKY TKK SA+I + Q+DQDKENC GT+MSFSVTA+  T + +G+T    S ++Y+SYD TTLRQCADGEA SST VFNSTSSGY ++VPTGCCSD V LWG AG +  P+ S G  A                      AQ  P+++VTG+GA F+A LS T +L D    + SSG + A      G  +D  C +++  AC GT  ++ G+ S+RCT  GCTKSTV +EKEFCAT EDLG ATATGT+KIP LN+ FDLA+LPEG  LRVRA K KS+H+TV V
Sbjct:   50 VDPVGTKYTTKKSSASIIISQNDQDKENCLGTAMSFSVTAQALTTLFEGDTNVMPSVSAYVSYDSTTLRQCADGEAGSSTMVFNSTSSGY-DNVPTGCCSDHVGLWGDAGTYY-PTISSGSAAAGSGGTSPTDSSFHQGSGAPGPAQSPPDLQVTGSGATFSATLSSTILLYD-EMLAMSSGSTSAXXXXAAGMTKDGKCVIDIVTACAGTVIVDGGQHSKRCTAKGCTKSTVDDEKEFCATAEDLGGATATGTIKIPKLNVKFDLANLPEGAKLRVRAGKSKSDHETVVV 337          
BLAST of jgi.p|Trimin1|347317 vs. uniprot
Match: A0A835ZFK6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFK6_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.000e-7
Identity = 46/95 (48.42%), Postives = 57/95 (60.00%), Query Frame = 0
Query:   68 QDKENCSGTSMSFSVTAENDTYIPDGETAAASTTSYISYDLTTLRQCADGEASSSTYV-FNSTSSGYIESVPTGCCSDRVSLWGSAGAFSGPSTS 161
            +D ENC+GT M+F + A   T    G  A  S +  IS+D +TLRQCA+GE  + T     STSSG  ESVP GCCSD +S+  S G FS  S S
Sbjct:  194 KDIENCTGTWMAFDLAARTKTDGKSGN-ATPSISFGISFDSSTLRQCANGEEITVTAPPVKSTSSG-AESVPAGCCSDDISVMASIGDFSSLSLS 286          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347317 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835ZE51_9STRA7.560e-198100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZIJ7_9STRA7.570e-8253.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZFK6_9STRA3.000e-748.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_10contigContig_10:1155063..1156887 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347317mRNA_4332Tribonema minus UTEX_B_3156 mRNAContig_10 1154486..1156922 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347317|estExt_Genemark1.C_Ctg_100133 ID=Trimin1|347317|estExt_Genemark1.C_Ctg_100133|Name=jgi.p|Trimin1|347317|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=327bp
MIVPSMTALLVLVAGQLTTTSAAEANATTSDSASYFTSSTSSWSLEPAGT
KYKTKKDSANINLYQDDQDKENCSGTSMSFSVTAENDTYIPDGETAAAST
TSYISYDLTTLRQCADGEASSSTYVFNSTSSGYIESVPTGCCSDRVSLWG
SAGAFSGPSTSDGAAGTGSSADTATQQGGEASGADSAQPNVEVTGTGAKF
AAALSGTFVLSDTSSWSSSSGGSGANTGKAEDVNCTVEVAMACGGTATLE
SGETSERCTLSGCTKSTVTEEKEFCATPEDLGSATATGTVKIPSLNINFD
LADLPEGVTLRVRAAKYKSEHDTVAV*
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