Trimin1|347245|estExt_Genemark1.C_Ctg_90142 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|347245
Unique Name	Trimin1\|347245\|estExt_Genemark1.C_Ctg_90142
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	238

Homology

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BLAST of jgi.p|Trimin1|347245 vs. uniprot
Match: A0A835YHZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHZ6_9STRA)

HSP 1 Score: 303 bits (777), Expect = 1.210e-101
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0

Query:    1 MTAGFRRPKRIPFLPPACGAAQVMQEAGGEERVFKYSLPKDPPSPPDDITRSRAAAAAPRSRGLLRGVLAVMRAARVVAGXXXXXXXXAVHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIARLTAALSTGGIDGGRASLTAMIAQGCGGMRAAGKMLGRARILLSRRGAAXXXXGGEGAAGDEFAPELGDEDDELESPGQLEERRGPNGVM 237
            MTAGFRRPKRIPFLPPACGAAQVMQEAGGEERVFKYSLPKDPPSPPDDITRSRAAAAAPRSRGLLRGVLAVMRAARVVAGXXXXXXXXAVHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIARLTAALSTGGIDGGRASLTAMIAQGCGGMRAAGKMLGRARILLSRRGAAXXXXGGEGAAGDEFAPELGDEDDELESPGQLEERRGPNGVM
Sbjct:    1 MTAGFRRPKRIPFLPPACGAAQVMQEAGGEERVFKYSLPKDPPSPPDDITRSRAAAAAPRSRGLLRGVLAVMRAARVVAGXXXXXXXXAVHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIARLTAALSTGGIDGGRASLTAMIAQGCGGMRAAGKMLGRARILLSRRGAAXXXXGGEGAAGDEFAPELGDEDDELESPGQLEERRGPNGVM 237

[Close]

BLAST of jgi.p|Trimin1|347245 vs. uniprot
Match: A0A835YHM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHM5_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.630e-54
Identity = 151/214 (70.56%), Postives = 158/214 (73.83%), Query Frame = 0

Query:   24 MQEAGGEERVFKYSLPKDPPSPPDDITRSRAAAAAPRSRGLLRGVLAVMRAARVVAGXXXXXXXXAVHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIARLTAALSTGGIDGGRASLTAMIAQGCGGMRAAGKMLGRARILLSRRGAAXXXXGGEGAAGDEFAPELGDEDDELESPGQLEERRGPNGVM 237
            MQEAGGEERVFKYSLPK+PP  PDDITR+R      RSRGLLRGVLA+ RAARV+AG        AVHA        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                ARL AALSTGG+DGGRASLTAMIAQG GGMRAAG+ LGRARILL RRGAA    G EG AGDEFA EL DED E ESPG+LEERRG NGVM
Sbjct:    1 MQEAGGEERVFKYSLPKEPP--PDDITRARXXXXXARSRGLLRGVLAITRAARVLAGGTAAAAVDAVHAGRQQARDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------ARLAAALSTGGVDGGRASLTAMIAQGRGGMRAAGRTLGRARILLRRRGAAAAAAG-EGVAGDEFALELEDEDGEFESPGRLEERRGLNGVM 195

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347245 vs. uniprot

BLAST of jgi.p|Trimin1|347245 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YHZ6_9STRA	1.210e-101	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YHM5_9STRA	2.630e-54	70.56	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..237

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_9	contig	Contig_9:1378989..1380713 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347245	mRNA_3632	Tribonema minus UTEX_B_3156	mRNA	Contig_9 1378989..1380894 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|347245|estExt_Genemark1.C_Ctg_90142 ID=Trimin1|347245|estExt_Genemark1.C_Ctg_90142|Name=jgi.p|Trimin1|347245|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=238bp
MTAGFRRPKRIPFLPPACGAAQVMQEAGGEERVFKYSLPKDPPSPPDDIT
RSRAAAAAPRSRGLLRGVLAVMRAARVVAGGTAAAAVNAVHAGRQQACDG
AAAAAAAPAPRARDSAAAAAAPLKKQRRSVVALLLLLPALLAAAIIARLT
AALSTGGIDGGRASLTAMIAQGCGGMRAAGKMLGRARILLSRRGAAAAAA
GGEGAAGDEFAPELGDEDDELESPGQLEERRGPNGVM*