Trimin1|347229|estExt_Genemark1.C_Ctg_90108 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347229
Unique NameTrimin1|347229|estExt_Genemark1.C_Ctg_90108
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length858
Homology
BLAST of jgi.p|Trimin1|347229 vs. uniprot
Match: A0A835YHX7_9STRA (Tubulin binding cofactor C-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHX7_9STRA)

HSP 1 Score: 1243 bits (3215), Expect = 0.000e+0
Identity = 857/857 (100.00%), Postives = 857/857 (100.00%), Query Frame = 0
Query:    1 MGSVHGMATQLPATSDAAIMTTLASLAEALRCQHPTMVAYTTWVAEGWRVLHWQLKQTTLFWEMLLLYTKDSSSVEQDSSGGGEKLRRGPTQPVEVPISALLLFLFLHLHPDALVQKAPASAARLHADSVWPSEDAPSPRSAAAHSPRNGLHSPTRHGAARHGMPHSPGGRTGVFFGAGAAXXXXXXXXXXXXXXXXGRCATGLRAHRLAFVRRHVAALLRLLADRDAPGGXXXXXXXXXXXXXXXXXXXXXHATRGDLSSLGFLIAGGHALDDPGPWDLADLCALRHVQAGTAAAPXXXXXXXXXXXXXXXXXAAGSWGEVCEWVAAALTVNDVLYPVPPSPAAQALADAHAAXXXXXXXXLSVADAVLGTHAAFDDDFLSPGAPGGGAAAQRKGSISKPLRLAEPDGGAALPLVINGAHKTTIVHAAAAGAAAARQLQINQCHESYMYVLAPLRHATIVGCTDCTIVVGAVRGALRVEDCARVTLVAAARRVCAVNCCECALHAYTPARPLFCGDTRACHVAPYNAAAYPRLRRHLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPPAAPPVSQAXXXXXXXRNMWCYPLDLNAPVAAPVRGXXXXXXXXXXXXXXXXXXPRVAMSPRAAALANEEFPHAAXXXXXXXXXXXXXXSSVSLMPPDAFHCITVPAPRSNEAEEGSNPNCANPGEGGAQGGAAAVNPFPLPAEYAAALREREAQLAQLEQLVQQSDLFPRQQRDXXXXXXXXXXXXXXXXGLEEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRGRFTEWLLSSGNLRQVLDLVQLERTGLSLGGNVSVSSGVGGAANVSAADIGTE 857
            MGSVHGMATQLPATSDAAIMTTLASLAEALRCQHPTMVAYTTWVAEGWRVLHWQLKQTTLFWEMLLLYTKDSSSVEQDSSGGGEKLRRGPTQPVEVPISALLLFLFLHLHPDALVQKAPASAARLHADSVWPSEDAPSPRSAAAHSPRNGLHSPTRHGAARHGMPHSPGGRTGVFFGAGAAXXXXXXXXXXXXXXXXGRCATGLRAHRLAFVRRHVAALLRLLADRDAPGGXXXXXXXXXXXXXXXXXXXXXHATRGDLSSLGFLIAGGHALDDPGPWDLADLCALRHVQAGTAAAPXXXXXXXXXXXXXXXXXAAGSWGEVCEWVAAALTVNDVLYPVPPSPAAQALADAHAAXXXXXXXXLSVADAVLGTHAAFDDDFLSPGAPGGGAAAQRKGSISKPLRLAEPDGGAALPLVINGAHKTTIVHAAAAGAAAARQLQINQCHESYMYVLAPLRHATIVGCTDCTIVVGAVRGALRVEDCARVTLVAAARRVCAVNCCECALHAYTPARPLFCGDTRACHVAPYNAAAYPRLRRHLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPPAAPPVSQAXXXXXXXRNMWCYPLDLNAPVAAPVRGXXXXXXXXXXXXXXXXXXPRVAMSPRAAALANEEFPHAAXXXXXXXXXXXXXXSSVSLMPPDAFHCITVPAPRSNEAEEGSNPNCANPGEGGAQGGAAAVNPFPLPAEYAAALREREAQLAQLEQLVQQSDLFPRQQRDXXXXXXXXXXXXXXXXGLEEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRGRFTEWLLSSGNLRQVLDLVQLERTGLSLGGNVSVSSGVGGAANVSAADIGTE
Sbjct:    1 MGSVHGMATQLPATSDAAIMTTLASLAEALRCQHPTMVAYTTWVAEGWRVLHWQLKQTTLFWEMLLLYTKDSSSVEQDSSGGGEKLRRGPTQPVEVPISALLLFLFLHLHPDALVQKAPASAARLHADSVWPSEDAPSPRSAAAHSPRNGLHSPTRHGAARHGMPHSPGGRTGVFFGAGAAXXXXXXXXXXXXXXXXGRCATGLRAHRLAFVRRHVAALLRLLADRDAPGGXXXXXXXXXXXXXXXXXXXXXHATRGDLSSLGFLIAGGHALDDPGPWDLADLCALRHVQAGTAAAPXXXXXXXXXXXXXXXXXAAGSWGEVCEWVAAALTVNDVLYPVPPSPAAQALADAHAAXXXXXXXXLSVADAVLGTHAAFDDDFLSPGAPGGGAAAQRKGSISKPLRLAEPDGGAALPLVINGAHKTTIVHAAAAGAAAARQLQINQCHESYMYVLAPLRHATIVGCTDCTIVVGAVRGALRVEDCARVTLVAAARRVCAVNCCECALHAYTPARPLFCGDTRACHVAPYNAAAYPRLRRHLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPPAAPPVSQAXXXXXXXRNMWCYPLDLNAPVAAPVRGXXXXXXXXXXXXXXXXXXPRVAMSPRAAALANEEFPHAAXXXXXXXXXXXXXXSSVSLMPPDAFHCITVPAPRSNEAEEGSNPNCANPGEGGAQGGAAAVNPFPLPAEYAAALREREAQLAQLEQLVQQSDLFPRQQRDXXXXXXXXXXXXXXXXGLEEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRGRFTEWLLSSGNLRQVLDLVQLERTGLSLGGNVSVSSGVGGAANVSAADIGTE 857          
BLAST of jgi.p|Trimin1|347229 vs. uniprot
Match: A0A835Z1R1_9STRA (Tubulin binding cofactor C-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1R1_9STRA)

HSP 1 Score: 313 bits (802), Expect = 1.150e-91
Identity = 274/630 (43.49%), Postives = 324/630 (51.43%), Query Frame = 0
Query:  206 AHRLAFVRRHVAALLRLLADRDAPGGXXXXXXXXXXXXXXXXXXXXXHATRGDLSSLGFLIAGGHALDDPGPWDLADLCALRHVQAGTAAAPXXXXXXXXXXXXXXXXXAAGSWGEVCEWVAAALTVNDVLYPVPP-----SPAAQALADAHAAXXXXXXXXLSVADAVLGTHAAFDDDFLSPGAPGGGAAAQRKGSISKPLRLAEPDGGAALPLVINGAHKTTIVHAAAAGAAAARQLQINQCHESYMYVLAPLRHATIVGCTDCTIVVGAVRGALRVEDCARVTLVAAARRVCAVNCCECALHAYTPARPLFCGDTRACHVAPYNAAAYPRLRRHLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPPAAPPVSQAXXXXXXXRNMWCYPLDLNAPVAAPVRGXXXXXXXXXXXXXXXXXXPRVAMSPRAAALA--NEEFPHAAXXXXXXXXXXXXXXSSVSLMPPDAFHCITVPAPRSNEAEEGSNPNCANPGEGGAQGGAAAVNPFPLPAEYAAALREREAQLAQLEQLVQQSDLFPRQQRDXXXXXXXXXXXXXXXXGLEEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRGRFTEWLLSSGNLRQVLDLVQLER 828
            AHRLAF++RH+  LLRL++   A              XXXXXXXX     R DLS+LGFLIAGG ALDD    DL DLC L     G    P                   GS  EV +W+AAALTVNDVLYP PP     +PA    + A   XXXXXXXX                                    ++P+R+A P   A +PLV+NGA +TT++HAAAAGA A R LQ++ CHESY+Y+LAP ++AT++GC++CTIVVGA  G +R+EDC RVTL+AA RR CAVNCCECALH Y P+RPLF GD RAC VAPYNAA YPRLR HLA                                P        XXXXXXXRNMW  PLDLNA   AP              XXXXXXX   A++PR AA A  +E  PHA               S+V+ MPPDAFHC+++PA    +  E              +    A+NPFPLP EYA  LREREA L QL+Q+VQ + L PRQQR+                 LEEA                                   VRGRFTEWL+SSG+LRQVLDLV LER
Sbjct:  157 AHRLAFIKRHLHDLLRLVSPAAADA------LSAAAAXXXXXXXXAFAVARADLSALGFLIAGGRALDDASQRDLCDLCPL--AGGGATRGP------------------VGSAAEVADWLAAALTVNDVLYPAPPPLPTAAPALPLESLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPVKXXXXXXXXTTEPVRVAAP-ARAGVPLVVNGAARTTVMHAAAAGARAERSLQVSHCHESYVYMLAPFQYATVLGCSECTIVVGAAAGVVRLEDCTRVTLIAACRRACAVNCCECALHLYAPSRPLFVGDNRACQVAPYNAA-YPRLRAHLAACGLLPPL------------------------PXXXXXXXXXXXXXXXRNMWFSPLDLNA---APT------------VXXXXXXXXXXALTPRTAAKAGADEAHPHALASA-----------SAVTQMPPDAFHCVSIPACAGGD--EXXXXXXXXXXXXXXREATQALNPFPLPPEYANKLREREALLQQLQQVVQGAQLSPRQQRE-----------------LEEA-----------------------------------VRGRFTEWLVSSGHLRQVLDLVHLER 654          
BLAST of jgi.p|Trimin1|347229 vs. uniprot
Match: D7FP08_ECTSI (C-CAP/cofactor C-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP08_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 3.410e-33
Identity = 92/224 (41.07%), Postives = 126/224 (56.25%), Query Frame = 0
Query:  321 EVCEWVAAALTVNDVLYPVPPSPAAQALADAHAAXXXXXXXXLSVADAVLGTHAAFDDDFLSPGAPGGGAAAQRKGSISKPLRLAEPDGGAALP------LVINGAHKTTIVHAAAAGAAAARQLQINQCHESYMYVLAPLRHATIVGCTDCTIVVGAVRGALRVEDCARVTLVAAARRVCAVNCCECALHAYTPARPLFCGDTRACHVAPYNAAAYPRLRRHL 538
            EV +++  ALTVNDV+YP+PPSP+A  LAD+ AA         + A A  G H     D   P   G    ++++G  +         GG  +P      L++N A +TT+VH A A     R LQ+N C ESY+YVL+ +R AT++GC DCT+V+GA  G +RVE+C R+ LV   RR+   N  EC    +    P+ CGD RAC  APYN+  YPR + HL
Sbjct:   18 EVAQYLMGALTVNDVVYPIPPSPSAIFLADSAAA---------TTATATAGGHG---PDEAVPAVGGAAVGSEQQGGHAC--------GGVTVPALPCAPLLVNCASRTTVVHNADASGPL-RDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAGMVRVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSC-YPRHKAHL 219          
BLAST of jgi.p|Trimin1|347229 vs. uniprot
Match: A0A7S3XVC9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVC9_HETAK)

HSP 1 Score: 106 bits (264), Expect = 1.520e-21
Identity = 71/228 (31.14%), Postives = 105/228 (46.05%), Query Frame = 0
Query:  321 EVCEWVAAALTVNDVLYPVPPSPAAQALADAHAAXXXXXXXXLSVADAVLGTHAAFDDDFLSPGAPGGGAAAQRKGSISKPLRLAEPDGGAALPLVINGAHKTTIVH----------AAAAGAAAARQLQINQCHESYMYVLAPLRHATIVGCTDCTIVVGAVRGALRVEDCARVTLVAAARRVCAVNCCECALHAYTPARPLFCGDTRACHVAPYNAAAYPRLRRHL 538
            EV EW+   L++N+VLYP PP+P  +                 S   A  G    F+  +    A     +   +G   +P            PLV N   +TT++H             + +   R + +N CH+SY+Y+L   + AT++GCTDCT+V+GA+ G + V +C R+ LV   RR+   NC +          P+  GD RAC +AP N A YP L  HL
Sbjct:   42 EVREWLMGVLSLNEVLYPPPPAPTGE-----------------SFTAAGDGEGGVFEQPWQQEKAKAQALSKADEGIYPEPA-----------PLVYNFVIRTTVMHDEDKKQDELGGEDSNSRQLRAVHVNHCHDSYIYLLGAFKSATVLGCTDCTVVIGAISGMVNVVECERIQLVTCCRRLVINNCLDSVFPTLAATPPVLHGDHRACRLAPPNHAGYPALAAHL 241          
BLAST of jgi.p|Trimin1|347229 vs. uniprot
Match: A0A7S1CD31_9STRA (TBCC domain-containing protein 1 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD31_9STRA)

HSP 1 Score: 103 bits (256), Expect = 7.990e-20
Identity = 66/183 (36.07%), Postives = 97/183 (53.01%), Query Frame = 0
Query:  384 GAPGGGAAAQRKGSISKP---------------LRLAEPDGGAALPLVINGAHKTTIVH-----AAAAGAAAAR--------QLQINQCHESYMYVLAPLRHATIVGCTDCTIVVGAVRGALRVEDCARVTLVAAARRVCAVNCCECALHAYTPARPLFCGDTRACHVAPYNAAAYPRLRRHL 538
            G+PGGG+A    GS S P                 + E +     P+V++G  +TT+V      A A G AA           ++I+ C E+Y+Y++AP+ +AT++GC  CTIV+GAV   + VE C  V +V+A  R+   N  +C  H YTP+ P+  GD R   +AP+NA  YPRL  H+
Sbjct:   17 GSPGGGSAPASPGSASPPPLHPAVSTEHEAHGSTPVPEGEEHVVRPIVVSGVTRTTVVRTSHLTAPAEGKAAEEAADLRTLPSVRIDSCTETYVYIVAPVAYATVIGCHSCTIVLGAVAAGVSVEHCEEVKVVSACSRLRIANSVDCDFHTYTPSHPIITGDCRGLRLAPHNAH-YPRLLHHM 198          
BLAST of jgi.p|Trimin1|347229 vs. uniprot
Match: UPI00142E4DE5 (uncharacterized protein LOC103841690 isoform X1 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E4DE5)

HSP 1 Score: 105 bits (261), Expect = 2.250e-19
Identity = 63/139 (45.32%), Postives = 84/139 (60.43%), Query Frame = 0
Query:  401 PLRLAEPDGGAALPLVINGAHKTTIVHAAAAGAAAARQLQINQCHESYMYVLAPLRHATIVGCTDCTIVVGAVRGALRVEDCARVTLVAAARRVCAVNCCECALHAYTPARPLFCGDTRACHVAPYNAAAYPRLRRHLA 539
            P ++A  D G   P +I G  KT++V  A+      R +++  CH+S +Y+LAPLR+AT+ GC+D TIV+GAV  ALRVE C RV ++AAA+RVC  NC EC        RPL  GD     VAPYN   Y  L  H++
Sbjct:  629 PNKVAPSDRG---PCLIEGVSKTSLVKQASD--LRGRSVKVVNCHDSVIYLLAPLRYATVHGCSDTTIVLGAVGKALRVEHCERVHVIAAAKRVCIANCRECVFFLGVNQRPLIVGDNHKLQVAPYNTY-YSHLEEHMS 761          
BLAST of jgi.p|Trimin1|347229 vs. uniprot
Match: A0A7N2M4C1_QUELO (TBCC domain-containing protein 1 n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2M4C1_QUELO)

HSP 1 Score: 101 bits (251), Expect = 2.610e-19
Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = 0
Query:  434 AAARQLQINQCHESYMYVLAPLRHATIVGCTDCTIVVGAVRGALRVEDCARVTLVAAARRVCAVNCCECALHAYTPARPLFCGDTRACHVAPYNAAAYPRLRRHL 538
            A +R  ++  CH+S +Y+LAPLR+ATI GC+D TIVVGAV  A+RVE C RV ++ AA+R+C  NC ECA       RPL  GD     VAPYN   Y +L  H+
Sbjct:  121 AVSRDFKVLNCHDSVIYLLAPLRYATIYGCSDATIVVGAVGKAIRVEHCERVHVITAAKRICIANCRECAFFLGVNQRPLIVGDNHKLQVAPYNTF-YSQLEEHM 224          
BLAST of jgi.p|Trimin1|347229 vs. uniprot
Match: A0A803LFW4_CHEQI (TBCC domain-containing protein 1 n=5 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A803LFW4_CHEQI)

HSP 1 Score: 103 bits (257), Expect = 3.060e-19
Identity = 52/101 (51.49%), Postives = 69/101 (68.32%), Query Frame = 0
Query:  439 LQINQCHESYMYVLAPLRHATIVGCTDCTIVVGAVRGALRVEDCARVTLVAAARRVCAVNCCECALHAYTPARPLFCGDTRACHVAPYNAAAYPRLRRHLA 539
            L++  CH+S +Y+LAPLR+ATI GC+D TIV+GAV  ALRVE C RV +++AA+R+C  NC EC  +     RPL  GD     VAPYN   YP+L  H++
Sbjct:  331 LKVLNCHDSVIYILAPLRYATIYGCSDATIVLGAVGKALRVEHCERVHVISAAKRICIANCRECMFYLGVNQRPLIIGDNHKLQVAPYNTF-YPQLEEHMS 430          
BLAST of jgi.p|Trimin1|347229 vs. uniprot
Match: A0A0D3DU27_BRAOL (TBCC domain-containing protein 1 n=15 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3DU27_BRAOL)

HSP 1 Score: 103 bits (257), Expect = 3.220e-19
Identity = 59/126 (46.83%), Postives = 78/126 (61.90%), Query Frame = 0
Query:  414 PLVINGAHKTTIVHAAAAGAAAARQLQINQCHESYMYVLAPLRHATIVGCTDCTIVVGAVRGALRVEDCARVTLVAAARRVCAVNCCECALHAYTPARPLFCGDTRACHVAPYNAAAYPRLRRHLA 539
            P +I G  KT++V  A+      R +++  CH+S +Y+LAPLR+AT+ GC+D TIV+GAV  ALRVE C RV ++AAA+RVC  NC EC        RPL  GD     VAPYN   Y  L  H++
Sbjct:  316 PCLIEGVSKTSLVKQASD--LRGRSVKVVNCHDSVIYLLAPLRYATVHGCSDTTIVLGAVGKALRVEHCERVHVIAAAKRVCIANCRECVFFLGVNQRPLIVGDNHKLQVAPYNTY-YSHLEEHMS 438          
BLAST of jgi.p|Trimin1|347229 vs. uniprot
Match: A0A3P5YQ52_BRACM (TBCC domain-containing protein 1 n=2 Tax=Brassica TaxID=3705 RepID=A0A3P5YQ52_BRACM)

HSP 1 Score: 103 bits (257), Expect = 3.420e-19
Identity = 59/126 (46.83%), Postives = 78/126 (61.90%), Query Frame = 0
Query:  414 PLVINGAHKTTIVHAAAAGAAAARQLQINQCHESYMYVLAPLRHATIVGCTDCTIVVGAVRGALRVEDCARVTLVAAARRVCAVNCCECALHAYTPARPLFCGDTRACHVAPYNAAAYPRLRRHLA 539
            P +I G  KT++V  A+      R +++  CH+S +Y+LAPLR+AT+ GC+D TIV+GAV  ALRVE C RV ++AAA+RVC  NC EC        RPL  GD     VAPYN   Y  L  H++
Sbjct:  329 PCLIEGVSKTSLVKQASD--LRGRSVKVVNCHDSVIYLLAPLRYATVHGCSDTTIVLGAVGKALRVEHCERVHVIAAAKRVCIANCRECVFFLGVNQRPLIVGDNHKLQVAPYNTY-YSHLEEHMS 451          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347229 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YHX7_9STRA0.000e+0100.00Tubulin binding cofactor C-domain-containing prote... [more]
A0A835Z1R1_9STRA1.150e-9143.49Tubulin binding cofactor C-domain-containing prote... [more]
D7FP08_ECTSI3.410e-3341.07C-CAP/cofactor C-like domain-containing protein n=... [more]
A0A7S3XVC9_HETAK1.520e-2131.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1CD31_9STRA7.990e-2036.07TBCC domain-containing protein 1 n=1 Tax=Bicosoeci... [more]
UPI00142E4DE52.250e-1945.32uncharacterized protein LOC103841690 isoform X1 n=... [more]
A0A7N2M4C1_QUELO2.610e-1950.48TBCC domain-containing protein 1 n=1 Tax=Quercus l... [more]
A0A803LFW4_CHEQI3.060e-1951.49TBCC domain-containing protein 1 n=5 Tax=Chenopodi... [more]
A0A0D3DU27_BRAOL3.220e-1946.83TBCC domain-containing protein 1 n=15 Tax=Brassica... [more]
A0A3P5YQ52_BRACM3.420e-1946.83TBCC domain-containing protein 1 n=2 Tax=Brassica ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 716..736
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 677..705
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 640..663
NoneNo IPR availablePANTHERPTHR16052:SF0TBCC DOMAIN-CONTAINING PROTEIN 1coord: 780..829
coord: 17..753
IPR016098Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminalGENE3D2.160.20.70coord: 415..562
e-value: 1.0E-22
score: 82.3
IPR012945Tubulin binding cofactor C-like domainPFAMPF07986TBCCcoord: 437..543
e-value: 3.3E-20
score: 72.0
IPR039589TBCC domain-containing protein 1PANTHERPTHR16052UNCHARACTERIZEDcoord: 780..829
coord: 17..753
IPR017901C-CAP/cofactor C-like domainPROSITEPS51329C_CAP_COFACTOR_Ccoord: 401..546
score: 23.438725

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:1072991..1083607 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347229mRNA_3600Tribonema minus UTEX_B_3156 mRNAContig_9 1072875..1083607 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347229|estExt_Genemark1.C_Ctg_90108 ID=Trimin1|347229|estExt_Genemark1.C_Ctg_90108|Name=jgi.p|Trimin1|347229|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=858bp
MGSVHGMATQLPATSDAAIMTTLASLAEALRCQHPTMVAYTTWVAEGWRV
LHWQLKQTTLFWEMLLLYTKDSSSVEQDSSGGGEKLRRGPTQPVEVPISA
LLLFLFLHLHPDALVQKAPASAARLHADSVWPSEDAPSPRSAAAHSPRNG
LHSPTRHGAARHGMPHSPGGRTGVFFGAGAAGGAGGGGAGGAGGARGGRC
ATGLRAHRLAFVRRHVAALLRLLADRDAPGGSSSTAAVNGGAAAAPLPPP
PPHATRGDLSSLGFLIAGGHALDDPGPWDLADLCALRHVQAGTAAAPAAA
AAAAAEAAAADADAAAGSWGEVCEWVAAALTVNDVLYPVPPSPAAQALAD
AHAAPPQPAAPSLSVADAVLGTHAAFDDDFLSPGAPGGGAAAQRKGSISK
PLRLAEPDGGAALPLVINGAHKTTIVHAAAAGAAAARQLQINQCHESYMY
VLAPLRHATIVGCTDCTIVVGAVRGALRVEDCARVTLVAAARRVCAVNCC
ECALHAYTPARPLFCGDTRACHVAPYNAAAYPRLRRHLAACDLLPPPRAA
YPRLRRHLAVCDLLPPPRGAPPAAPPVSQAAPPPPPPRNMWCYPLDLNAP
VAAPVRGGGGGSGGGANSAAAAAASPRVAMSPRAAALANEEFPHAAGSSG
GSGGGAGGGNSSVSLMPPDAFHCITVPAPRSNEAEEGSNPNCANPGEGGA
QGGAAAVNPFPLPAEYAAALREREAQLAQLEQLVQQSDLFPRQQRDLKRL
VQQSDLFPRQQRGLEEALVQQSDLFPRQQRDLKRLVQQSDLFPRQQRELE
EAVRGRFTEWLLSSGNLRQVLDLVQLERTGLSLGGNVSVSSGVGGAANVS
AADIGTE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016098CAP/MinC_C
IPR012945Tubulin-bd_cofactor_C_dom
IPR039589TBCC1
IPR017901C-CAP_CF_C-like