Trimin1|346810|estExt_Genemark1.C_Ctg_50156 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|346810
Unique Name	Trimin1\|346810\|estExt_Genemark1.C_Ctg_50156
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	490

Homology

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BLAST of jgi.p|Trimin1|346810 vs. uniprot
Match: A0A835YSG7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSG7_9STRA)

HSP 1 Score: 961 bits (2485), Expect = 0.000e+0
Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 0

Query:    1 MSSRRQSCTSRSHASTVAHQHSTSLLQQLPPVMPAWLIEGGANDSNPDVAQDPGAAADAGVPETPLKLEATVLADMGDAAMEQALACLKAPLFSGQQWALAPALKGAGAYCCPKNKGAFGAHQHQVCSRSLCGVGLAFVGTPFISQGGFYPFECEVDYSGDFAQRKKDGSLCNFKCFDGALTPETASALVLQGVNDKRIPYGTMLEALACLQAHAKATDMVAETPLQGLYRLVFSAGSIVPELQPGRSARGAWASPSSNSGGLDMRLGAAPAPHIKIDRSGGGPFRITETISGLYSVEDGRLEAHFNEVQCGSLHLADGLAAVALGALHAAPVSLRTFFAQDGVMALHCATQALHCAVQDKEGVLVFQRDNDEGRSHTVSRVEANALKHATKIMAENRPQAAKPRADATDAEKAKARPTASTSSNSLEPVGPIPGNPVLGWLTTEIMPLYAMLAGPTLWRFVHAYWPIGMTKAVVAVHAITAMLDGINT 489
            MSSRRQSCTSRSHASTVAHQHSTSLLQQLPPVMPAWLIEGGANDSNPDVAQDPGAAADAGVPETPLKLEATVLADMGDAAMEQALACLKAPLFSGQQWALAPALKGAGAYCCPKNKGAFGAHQHQVCSRSLCGVGLAFVGTPFISQGGFYPFECEVDYSGDFAQRKKDGSLCNFKCFDGALTPETASALVLQGVNDKRIPYGTMLEALACLQAHAKATDMVAETPLQGLYRLVFSAGSIVPELQPGRSARGAWASPSSNSGGLDMRLGAAPAPHIKIDRSGGGPFRITETISGLYSVEDGRLEAHFNEVQCGSLHLADGLAAVALGALHAAPVSLRTFFAQDGVMALHCATQALHCAVQDKEGVLVFQRDNDEGRSHTVSRVEANALKHATKIMAENRPQAAKPRADATDAEKAKARPTASTSSNSLEPVGPIPGNPVLGWLTTEIMPLYAMLAGPTLWRFVHAYWPIGMTKAVVAVHAITAMLDGINT
Sbjct:    1 MSSRRQSCTSRSHASTVAHQHSTSLLQQLPPVMPAWLIEGGANDSNPDVAQDPGAAADAGVPETPLKLEATVLADMGDAAMEQALACLKAPLFSGQQWALAPALKGAGAYCCPKNKGAFGAHQHQVCSRSLCGVGLAFVGTPFISQGGFYPFECEVDYSGDFAQRKKDGSLCNFKCFDGALTPETASALVLQGVNDKRIPYGTMLEALACLQAHAKATDMVAETPLQGLYRLVFSAGSIVPELQPGRSARGAWASPSSNSGGLDMRLGAAPAPHIKIDRSGGGPFRITETISGLYSVEDGRLEAHFNEVQCGSLHLADGLAAVALGALHAAPVSLRTFFAQDGVMALHCATQALHCAVQDKEGVLVFQRDNDEGRSHTVSRVEANALKHATKIMAENRPQAAKPRADATDAEKAKARPTASTSSNSLEPVGPIPGNPVLGWLTTEIMPLYAMLAGPTLWRFVHAYWPIGMTKAVVAVHAITAMLDGINT 489

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|346810 vs. uniprot

BLAST of jgi.p|Trimin1|346810 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YSG7_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 393..429
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..61

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_5	contig	Contig_5:1310057..1325271 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|346810	mRNA_2410	Tribonema minus UTEX_B_3156	mRNA	Contig_5 1310029..1325271 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|346810|estExt_Genemark1.C_Ctg_50156 ID=Trimin1|346810|estExt_Genemark1.C_Ctg_50156|Name=jgi.p|Trimin1|346810|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=490bp
MSSRRQSCTSRSHASTVAHQHSTSLLQQLPPVMPAWLIEGGANDSNPDVA
QDPGAAADAGVPETPLKLEATVLADMGDAAMEQALACLKAPLFSGQQWAL
APALKGAGAYCCPKNKGAFGAHQHQVCSRSLCGVGLAFVGTPFISQGGFY
PFECEVDYSGDFAQRKKDGSLCNFKCFDGALTPETASALVLQGVNDKRIP
YGTMLEALACLQAHAKATDMVAETPLQGLYRLVFSAGSIVPELQPGRSAR
GAWASPSSNSGGLDMRLGAAPAPHIKIDRSGGGPFRITETISGLYSVEDG
RLEAHFNEVQCGSLHLADGLAAVALGALHAAPVSLRTFFAQDGVMALHCA
TQALHCAVQDKEGVLVFQRDNDEGRSHTVSRVEANALKHATKIMAENRPQ
AAKPRADATDAEKAKARPTASTSSNSLEPVGPIPGNPVLGWLTTEIMPLY
AMLAGPTLWRFVHAYWPIGMTKAVVAVHAITAMLDGINT*