Trimin1|346795|estExt_Genemark1.C_Ctg_50093 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346795
Unique NameTrimin1|346795|estExt_Genemark1.C_Ctg_50093
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1476
Homology
BLAST of jgi.p|Trimin1|346795 vs. uniprot
Match: A0A836CBT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT2_9STRA)

HSP 1 Score: 2130 bits (5520), Expect = 0.000e+0
Identity = 1475/1475 (100.00%), Postives = 1475/1475 (100.00%), Query Frame = 0
Query:    1 MSSSLALGTETGAMWTVALHDACXXXXXXXXXXXLTDFHGNLSRRLRPHRGAIHDISIDASGEFVASCSQDGTVVVTSLQHDNGGXXXXXGADSECCLTIDIHLTFMTVLGADRASXXXXXXDRSEEVYTYGAPVAAVRLDPLYARRRDKVFIAGGTAGKVASSLMTLVFDARDSTVHLGXXXXXXXXXXXXXXXXXXXXXLMLNKRGWSSHKEALXXXXXXXXXXXXXVLHEGEGAVSAIAWRGSLVAWANGRGVKIMDVDKIMDVDKVRALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKFFFAXXXXXXXXXXXXXXXXXXXDKMKCGAACSKVLLXXXXXXXXXXXXAVSDEEPVSAVDKPRGALHWESDSCLLMAWGDTFLILQVGIREGSTAAGLLERVRTSSEGTSLAGTLEGGVVAARMAPKRVAEITALWQSDCLICGVSPFDADTLVLLGYPVPQSLAEAREAAAAAGPEVQLVRRATGENPGRRVVGHAELVHQLEELRSVLAADTLPLNGWQNNLAGHYCMASTSWSPGAIRWPRGKAAQAGAASAMHINTAAAXXXXXXXXXTTAGLPPALFIAAPQSAPHQHLLRDFLRLPFSDPHRLSAPQARDAACAAPLPGVARAPPMRRARDADLVVARDLVVARVRDVDDSXXXXXXXXXXXXXVAWALQRGDAGAAVRVALRNRHSLRTHSYRDLVARRLEELMGEGRYEVXXXXXXXXXXXXXXXAAAETPLLLGSDAAAWEQWIYAFARRGRLDAIAPHVPPLPEQEGGGEALPAASLRLAGSVYMLILEHLLTAKPPLFLETVRRWGHPRDAAAAARRAEVSTADTAASAPSRQAQGVAAAKALYSLSPLMMAXXXXXXXXXXXXXXXXXXXXXLRARLGAHVLEAQAELLLLDRQFERAVGAYLTMARVRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVAPRTAAHVFKLIEQHSLFRAIQGRVRELVQLSQAGAIQIPSSSPRRHANAKILTSSAYSSILRIVLRAAVHFRVLELIQLSQADAGALLVRHVDKLPAAQVVPQLRGRRDLXXXXXXXXXXXXQHWYLHLLFTQAPELYNTPEHAQFHALQVSLYAQFAPPFQPRRPPPYDSDFLRFLRGSAFAPLEAALTECEKRRPPLWDEMVALSVLLEEVDCARRAIEFVGAHDKDLWYRLIDYSLRNERFLGGLLDHAGVYTLVLRDTYXXXXXXXXXXXXXXXXXXXXXXXXXXDVDLAGLIRGVPEGMRAXXXXXXXXXXXXXXXXXRIQGLREKLGKITSDYRFQXXXXXXXXXVTLHETCLSSLRSDHLAKLRRLNQMRRRALRVSAGGGSSCSARACCSVEPSPPASAHAQCTPGRGIAASGGLRVFACGHSFHEACLKPQAGLRGGPQRGGSCPGCAGSGGALSGALALR 1475
            MSSSLALGTETGAMWTVALHDACXXXXXXXXXXXLTDFHGNLSRRLRPHRGAIHDISIDASGEFVASCSQDGTVVVTSLQHDNGGXXXXXGADSECCLTIDIHLTFMTVLGADRASXXXXXXDRSEEVYTYGAPVAAVRLDPLYARRRDKVFIAGGTAGKVASSLMTLVFDARDSTVHLGXXXXXXXXXXXXXXXXXXXXXLMLNKRGWSSHKEALXXXXXXXXXXXXXVLHEGEGAVSAIAWRGSLVAWANGRGVKIMDVDKIMDVDKVRALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKFFFAXXXXXXXXXXXXXXXXXXXDKMKCGAACSKVLLXXXXXXXXXXXXAVSDEEPVSAVDKPRGALHWESDSCLLMAWGDTFLILQVGIREGSTAAGLLERVRTSSEGTSLAGTLEGGVVAARMAPKRVAEITALWQSDCLICGVSPFDADTLVLLGYPVPQSLAEAREAAAAAGPEVQLVRRATGENPGRRVVGHAELVHQLEELRSVLAADTLPLNGWQNNLAGHYCMASTSWSPGAIRWPRGKAAQAGAASAMHINTAAAXXXXXXXXXTTAGLPPALFIAAPQSAPHQHLLRDFLRLPFSDPHRLSAPQARDAACAAPLPGVARAPPMRRARDADLVVARDLVVARVRDVDDSXXXXXXXXXXXXXVAWALQRGDAGAAVRVALRNRHSLRTHSYRDLVARRLEELMGEGRYEVXXXXXXXXXXXXXXXAAAETPLLLGSDAAAWEQWIYAFARRGRLDAIAPHVPPLPEQEGGGEALPAASLRLAGSVYMLILEHLLTAKPPLFLETVRRWGHPRDAAAAARRAEVSTADTAASAPSRQAQGVAAAKALYSLSPLMMAXXXXXXXXXXXXXXXXXXXXXLRARLGAHVLEAQAELLLLDRQFERAVGAYLTMARVRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVAPRTAAHVFKLIEQHSLFRAIQGRVRELVQLSQAGAIQIPSSSPRRHANAKILTSSAYSSILRIVLRAAVHFRVLELIQLSQADAGALLVRHVDKLPAAQVVPQLRGRRDLXXXXXXXXXXXXQHWYLHLLFTQAPELYNTPEHAQFHALQVSLYAQFAPPFQPRRPPPYDSDFLRFLRGSAFAPLEAALTECEKRRPPLWDEMVALSVLLEEVDCARRAIEFVGAHDKDLWYRLIDYSLRNERFLGGLLDHAGVYTLVLRDTYXXXXXXXXXXXXXXXXXXXXXXXXXXDVDLAGLIRGVPEGMRAXXXXXXXXXXXXXXXXXRIQGLREKLGKITSDYRFQXXXXXXXXXVTLHETCLSSLRSDHLAKLRRLNQMRRRALRVSAGGGSSCSARACCSVEPSPPASAHAQCTPGRGIAASGGLRVFACGHSFHEACLKPQAGLRGGPQRGGSCPGCAGSGGALSGALALR
Sbjct:    1 MSSSLALGTETGAMWTVALHDACXXXXXXXXXXXLTDFHGNLSRRLRPHRGAIHDISIDASGEFVASCSQDGTVVVTSLQHDNGGXXXXXGADSECCLTIDIHLTFMTVLGADRASXXXXXXDRSEEVYTYGAPVAAVRLDPLYARRRDKVFIAGGTAGKVASSLMTLVFDARDSTVHLGXXXXXXXXXXXXXXXXXXXXXLMLNKRGWSSHKEALXXXXXXXXXXXXXVLHEGEGAVSAIAWRGSLVAWANGRGVKIMDVDKIMDVDKVRALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKFFFAXXXXXXXXXXXXXXXXXXXDKMKCGAACSKVLLXXXXXXXXXXXXAVSDEEPVSAVDKPRGALHWESDSCLLMAWGDTFLILQVGIREGSTAAGLLERVRTSSEGTSLAGTLEGGVVAARMAPKRVAEITALWQSDCLICGVSPFDADTLVLLGYPVPQSLAEAREAAAAAGPEVQLVRRATGENPGRRVVGHAELVHQLEELRSVLAADTLPLNGWQNNLAGHYCMASTSWSPGAIRWPRGKAAQAGAASAMHINTAAAXXXXXXXXXTTAGLPPALFIAAPQSAPHQHLLRDFLRLPFSDPHRLSAPQARDAACAAPLPGVARAPPMRRARDADLVVARDLVVARVRDVDDSXXXXXXXXXXXXXVAWALQRGDAGAAVRVALRNRHSLRTHSYRDLVARRLEELMGEGRYEVXXXXXXXXXXXXXXXAAAETPLLLGSDAAAWEQWIYAFARRGRLDAIAPHVPPLPEQEGGGEALPAASLRLAGSVYMLILEHLLTAKPPLFLETVRRWGHPRDAAAAARRAEVSTADTAASAPSRQAQGVAAAKALYSLSPLMMAXXXXXXXXXXXXXXXXXXXXXLRARLGAHVLEAQAELLLLDRQFERAVGAYLTMARVRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVAPRTAAHVFKLIEQHSLFRAIQGRVRELVQLSQAGAIQIPSSSPRRHANAKILTSSAYSSILRIVLRAAVHFRVLELIQLSQADAGALLVRHVDKLPAAQVVPQLRGRRDLXXXXXXXXXXXXQHWYLHLLFTQAPELYNTPEHAQFHALQVSLYAQFAPPFQPRRPPPYDSDFLRFLRGSAFAPLEAALTECEKRRPPLWDEMVALSVLLEEVDCARRAIEFVGAHDKDLWYRLIDYSLRNERFLGGLLDHAGVYTLVLRDTYXXXXXXXXXXXXXXXXXXXXXXXXXXDVDLAGLIRGVPEGMRAXXXXXXXXXXXXXXXXXRIQGLREKLGKITSDYRFQXXXXXXXXXVTLHETCLSSLRSDHLAKLRRLNQMRRRALRVSAGGGSSCSARACCSVEPSPPASAHAQCTPGRGIAASGGLRVFACGHSFHEACLKPQAGLRGGPQRGGSCPGCAGSGGALSGALALR 1475          
BLAST of jgi.p|Trimin1|346795 vs. uniprot
Match: D7FS06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS06_ECTSI)

HSP 1 Score: 382 bits (980), Expect = 1.690e-110
Identity = 402/1406 (28.59%), Postives = 515/1406 (36.63%), Query Frame = 0
Query:   10 ETGAMWTV---ALHDACXXXXXXXXXXXLTDFHGNLSRRLRPHRGAIHDISIDASGEFVASCSQDGTVVVTSLQHDNGGXXXXXGADSECCLTIDIHLTFMTVLGADRASXXXXXXDRSEEVYTYGA--PVAAVRLDPLYARRRDKVFIAGGTAGKVASSLMTLVFDARDSTVHLGXXXXXXXXXXXXXXXXXXXXXLMLNKRGWSSHKEALXXXXXXXXXXXXXVLHEGEGAVSAIAWRGSLVAWANGRGVKIMDVDKIMDVDKVRALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKFFFAXXXXXXXXXXXXXXXXXXXDKMKCGAACSKVLLXXXXXXXXXXXXAVSDEEPVSAVDKPRGALH-----------WESDSCLLMAWGDTFLILQVGIRE---------------------GSTAAGLLERVRTSSEGTS-LAGTLEGGVVAARMA--------PKRVAEITALWQSDCLICGVSPFDADTLVLLGYPVPQSLAEAR-----EAAAAAG---PEVQLVRRATGENPGRRVVGHAELVHQLEELRSVLAADTLPLNGWQNNLAGHYCMASTSWSPGAIRWPRGKAAQAGAASAMHINTAAAXXXXXXXXXTTAGLPPALFIAAPQSAPHQHLLRDFLRLPFSDPHRLSAPQARDAACAAPLPGVARAPPMRRARDADLVVARDLVVARVRDVDDSXXXXXXXXXXXXXVAWALQRGDAGAAVRVALRNRHSLRTHSYRDLVARRLEELMGEGRYEVXXXXXXXXXXXXXXXAAAETPLLLGSDAAAWEQWIYAFARRGRLD---AIAPHVPPLPEQEGGGEALPAASLRLAGSVYMLILEHLLTAKPPLFLETVRRWGHPRDAAAAARRAEVSTADTAASAPSRQAQGVAAAKALYSLSPLMMAXXXXXXXXXXXXXXXXXXXXXLRARLGAHVLEAQAELLLLDRQFERAVGAYLTMARVRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVAPRTAAHVFKLIEQHSLFRAIQGRVRELVQLSQAGAIQIPSSSPRRHANAKILTSSAYSSILRIVLRAAVHFRVLELIQLSQADAGALLVRHVDKLPAAQVVPQLRGRRDLXXXXXXXXXXXXQHWYLHLLFTQAPELYNTPEHAQFHALQVSLYAQFAPPFQPRRPPPYDSDFLRFLRGSAFAPLEAALTECEKRRPPLWDEMV-----------ALSVLLEEVDCARRAIEFVGAHDKDLWYRLIDYSLRNERFLGGLLDHAGVYTLVLRDTYXXXXXXXXXXXXXXXXXXXXXXXXXXDVDLAGLIRGVPEGMRAXXXXXXXXXXXXXXXXXRIQGLREKLGKITSDYRFQ 1347
            E G   TV   A+HD C           LTD+HGN +RRLRPH  A+ D+S+D +G+F+AS S+DGTVVVT LQ          GA+ E                             + EVY+YGA  P+ AV+LDPLYARR+DK F+AGG+AGK                                         L+LNK+GW  H E               VLH+GEG +SAIAWRG LVAWA+  G+KIMDVDK                                                    GK                                                      E +S VDKPR  +            WE+ + LL+ WGDT ++LQ+ +RE                     G+ +AG   R RTS   T+ + G L   V+ A  A        P+R  +I A+WQSDCLICG+SPFD+DT+VLLG+PV +           E   A G   PEVQLV+R +GE                     V++ADT+PL GW++  AG   + ST WS  + +  R      GA +  +    A             GLPPA F+ +P+                                                         DL+VARVRD+DD                            +V    R +   H++   + R                                            E+W +   + G      A A  + P  E+ GG   + AA                 +  PP                      EV   D                  LYSL P++MA                     L  R    V+EA AE  ++DRQF RAV  YL++A  +AA                                                               +     HVF++IEQHSLF A+Q RV                                                 L+LI+L +   G LL+RH +K   + VV QL+GRRDL            QHWYL LLF ++PE+Y   E+A FHALQVSL A+FAPPF+  RPP Y S FLRFLR + FAPLEAAL EC KRRPPL+DEM            AL++LLEEV    RAIEFV AHDKDLWYRLI++SL++E FL GLLDHAGVY                                  DVDLA L+  +P+GM                    I GLR+K+ KI SDY FQ
Sbjct:   45 EAGEKETVVRMAVHDTCLVFGMASGMILLTDYHGNEARRLRPHTKAVTDLSMDITGDFLASSSEDGTVVVTGLQ---------PGANGE---------------------------HTAPEVYSYGAKWPMLAVKLDPLYARRKDKTFVAGGSAGK-----------------------------------------LLLNKKGWLGHDEV--------------VLHKGEGPLSAIAWRGPLVAWASDGGLKIMDVDK----------------------------------------------------GK----------------------------------------------------GGERISYVDKPRSLVDFKEHECRCHMLWETPTRLLVGWGDTVMVLQILVREPKYQRGGSLSPMKQPHLSPQGGNGSAGDSNR-RTSVPLTNPIGGGLPMAVIGAPTAAAPVALEAPERYTQIVAVWQSDCLICGLSPFDSDTVVLLGFPVEEXXXXXXXXXXGEGVVAKGVFQPEVQLVKRQSGE---------------------VISADTVPLRGWEHAGAGQLLLRSTCWSISSYKPDR-----EGATTVFYTPAEAEATGVR-------GLPPATFVMSPE---------------------------------------------------------DLIVARVRDIDD----------------------------KVCSPPRDAQNMHTFSACLPR--------------------------------------------ERWGHPRGKHGGQHGGRATASRIAP-GERSGGAGGIAAAGK---------------SESPP----------------------EVQQQD------------------LYSL-PVVMARMEAS----------------LVQRPDPVVMEAHAEAYVMDRQFARAVRVYLSLAEHQAASENGARLQQQQRQQQRTGGIGRAPQGPARGRQGSSATPSITHGVGTGDGAG------------SEAQYGHVFRMIEQHSLFDAVQDRV-------------------------------------------------LQLIRLDRELTGELLLRHPEKFSVSSVVSQLKGRRDL------------QHWYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVY----------------------------------DVDLARLVAEIPKGMH-------------------IPGLRDKVVKIISDYHFQ 893          
BLAST of jgi.p|Trimin1|346795 vs. uniprot
Match: A0A6H5KFS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS4_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 4.840e-71
Identity = 185/464 (39.87%), Postives = 228/464 (49.14%), Query Frame = 0
Query: 1058 TSSAYSSILRIV----LRAAVHFRVLELIQLSQADAGALLVRHVDKLPAAQVVPQLRGRRDLXXXXXXXXXXXXQHWYLHLLFTQAPELYNTPEHAQFHALQVSLYAQFAPPFQPRRPPPYDSDFLRFLRGSAFAPLEAALTECEKRRPPLWDEMV-----------ALSVLLEEVDCARRAIEFVGAHDKDLWYRLIDYSLRNERFLGGLLDHAGVYTLVLRDTYXXXXXXXXXXXXXXXXXXXXXXXXXXDVDLAGLIRGVPEGMRAXXXXXXXXXXXXXXXXXRIQGLREKLGKITSDYRFQXXXXXXXXXVTLHETCLSSLRSDHLAKLRRLNQMRRRALRVSAGGGSSCSARACCSVEPSPP----------------ASAHAQCTPGRGIAAS------------------------------GGLRVFACGHSFHEACL-----KPQAGLRGGPQRG 1455
            + + YS + R++    L  AV  RVL+LI+L +   G LL+RH +K   + VV QL GRRDL            QHWYL LLF ++PE+Y   E+A +HALQVSL A+FAPPF+  RPP Y S FLRFLR + FAPLEAAL EC KRRPPL+DEM            AL++LLEEV    RAIEFV AHDKDLWYRLI++SL++E FL GLLDHAGVY                                  DVDLA L+  +P+GM                    I GLR+K+ KI SDY FQ         V+++E+C +S+++D L +LRRLNQ +RRA RV A     C    C      PP                A  +     GRG                                  GG  VF CGH FHE CL     +   G R G  RG
Sbjct:   76 SEAQYSHVFRMIEQHSLFDAVQDRVLQLIRLDRELTGELLLRHPEKFSVSSVVAQLNGRRDL------------QHWYLGLLFDRSPEMYGAQEYAPYHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVY----------------------------------DVDLARLVAEIPKGMH-------------------IPGLRDKVVKIISDYHFQ---------VSVNESCCASVKTDLLRRLRRLNQGQRRATRVDADAR--CCYGMCLMPLAGPPRELGGDAGGXXXXXVLADRNRPVAAGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTVVFPCGHMFHEYCLSVARDRGSKGKRSGSSRG 463          
BLAST of jgi.p|Trimin1|346795 vs. uniprot
Match: W7TUN1_9STRA (Vacuolar protein sorting-associated protein 41 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUN1_9STRA)

HSP 1 Score: 244 bits (624), Expect = 5.070e-62
Identity = 358/1448 (24.72%), Postives = 490/1448 (33.84%), Query Frame = 0
Query:  125 SEEVYTYGA-PVAAVRLDPLYARRRDKVFIAGGTAGKVASSLMTLVFDARDSTVHLGXXXXXXXXXXXXXXXXXXXXXLMLNKRGW-SSHKEALXXXXXXXXXXXXXVLHEGEGAVSAIAWRGSLVAWANGRGVKIMDVDKIMDVDKVRALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKFFFAXXXXXXXXXXXXXXXXXXXDKMKCGAACSKVLLXXXXXXXXXXXXAVSDEEPVSAVDKP---------RGALHWESDSCLLMAWGDTFLILQVGIREGSTAAGLLERVRTSSEGTSLAGTLEGGVVAARMAP----KRVAEITALWQSDCLICGVSPFDADTLVLLGYPVPQSLAEAREAAAAA-GPEVQLVRRAT--------------GENPGRRVVGHAELVHQLEELRSVLAADTLPLNGWQNNLAGHYCMASTSWS--------PGAIRWPRGKAAQAGAASAMHINTAAAXXXXXXXXXTTAGLPPALFIAAPQSAPHQHLLRDFLRLPFSDPHRLSAPQARDAACAAPLP--GVARAPPMRRARDADLVVARDLVVARVRDVDDSXXXXXXXXXXXXXVAWALQRGDAGAAVRVALRNRHSLRTHSYRDLVARRLEELMGEGRYEVXXXXXXXXXXXXXXXAAAETPLLLGSDAAAWEQWIYAFARRGRLDAIAPHVPPLPEQEGGGEALPAASLRLAGSVYMLILEHLLTAKPPLFLETVRRWGHPRDAAAAARRAEVSTADTAASAPSRQAQGVAAAKA-LYSLSPLMMAXXXXXXXXXXXXXXXXXXXXXLRARLGAHVLEAQAELLLLDRQFERAVGAYLTMARVRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVAPRTAAHVFKLIEQHSLFRAIQGRVRELVQLSQAGAIQIPSSSPRRHANAKILTSSAYSSILRIVLRAAVHFRVLELIQLSQADAGALLVRHVDKLPAAQVVPQL----RGRRDLXXXXXXXXXXXXQH-----------WYLHLLFTQAPELYNTPEHAQFHALQVSLYAQFAPPFQPR-----------------------------------RPPPYDSDFLRFLRGSAFAPLEAALTECEKRRPPLWDEMV-----------ALSVLLEEVDCARRAIEFVGAHDKDLWYRLIDYSLRNERFLGGLLDHAGVYTLVLRDTYXXXXXXXXXXXXXXXXXXXXXXXXXXDVDLA-GLIRGVPEGMRAXXXXXXXXXXXXXXXXXRIQGLREKLGKITSDYRFQXXXXXXXXXVTLHETCLSSLRSDHLAKLRRLNQMRRRALRVSAGGGSSCSARACCSVEPSPPASAHAQCTPGRGIAASG--GLRVFACGHSFHEACL--------KPQAGLRGGPQRGGSCP 1459
            SE+V+     P+ AV LDP Y R  +K F+ GG  G+                                         L+L ++G+ SS++E                LHE EG ++AIAWRGSLVAWAN  GVK++DV+                                                                                                            EE +  + +P         R +L WES++ LL+ W DTF++LQ+  R   T    L     +S               +  +      RV E+T  W++DC+I G+ PFD D++ LLGY V     EA E  A   G E  + R  T              G+ P  +VV  AEL  +      + + D LP++G +        + ++S+         PG  R PRG     G  +      A A         T+AG                HL    L             + +D + ++P    G +  P M       +    DL+VARVR V+D              + W LQ+G  GAA+ +AL NRH L    +  L    LE L+ +G Y                 AAAE P LLG +A++WE+WIY FA R RL ++AP +P               S RL+ S Y ++L H L      FL T+++WG  +       R E                GV      LY L  L                                +L+A A LL    +F  ++  Y  + R+ +A                                                             +      + VF +IE+H+ F A   RV  LV++                                                  ++ A  LLVR+VD+LP A VV QL    RG                Q            WYL LLF + P+ YN PE AQFH LQV LYA  APPF P                                      P Y SD L FL  S    LE AL  CE+R+PPL+DE+V           AL +LL E+   RRAIEFV  HDK LW  L  +SL++ RFL GLL HAG Y                                  +VDLA  L+  +P+ MR                   I+GL+ KL  I + YRF+          TLHE        D++A  RR +  +RRA+RV     S C  + C      P  +      P R   +     L VF+C H +H+ C          P+AG  GG   G   P
Sbjct:  225 SEQVFRVSKQPLLAVHLDPGYRRISEKAFVTGGQEGR-----------------------------------------LVLGRKGFFSSYREE--------------TLHENEGPITAIAWRGSLVAWANEEGVKVLDVE-----------------------------------------------------------------------------------------------------------GEERICFLARPEIEGRSTDLRCSLLWESETSLLIGWFDTFMVLQIKARAPGTTPERLPPASAASXXXXXXXXXXXXXXPSHPSSAQRGSRVGEMTVRWKADCVISGLWPFDVDSVALLGY-VSLVEGEAGEGEAGVQGLERGMERLTTSSQDTTDSDQDPVPGQPPSSKVVCRAELQLRSRREGRLFSGDILPVHGEERVRDSLGFLFASSFGLTCRRVPGPGLWRLPRGLGRAGGLIA--KAGAAHAGSQGGSKDATSAGC---------------HLASRGLGDGGGADSSHGPGRGQDLSASSPASDTGESFMPVML------IAGPEDLLVARVRGVEDR-------------ILWVLQKGAMGAAIELALLNRHLLTHQRFHALATSYLEVLLAQGAY---------------GRAAAECPRLLGEEASSWERWIYTFAARRRLASLAPFIP-------------LESPRLSRSTYEMVLNHFLDCDREAFLSTIKKWGTQQQKFGRGARDE---------------GGVEGRSGGLYDLEDLSKRVTNIVAQAPDPL-----------------LLQAHAYLLQRQGRFAASLAVYWDLFRLLSAAARRRSPRGSAAGDM----------------------------------------------QTRKHLFSPVFSMIEEHNFFDAAAERVSLLVKMD-------------------------------------------------RSKAADLLVRYVDRLPVASVVRQLQLEERGGEGEGAVPSTALAGHPQSSHASASPSLVLWYLDLLFRRLPDHYNHPEFAQFHVLQVELYAAAAPPFCPAPERSHTNAKDEDTVKIKDSGAHGSGENASDEEDGVAEPAYTSDLLSFLMWSNHVRLETALAACERRQPPLYDEIVYILSRIGHNKEALRLLLVEIRSVRRAIEFVDRHDKGLWRELTAHSLQHPRFLAGLLRHAGNY----------------------------------NVDLARSLVEDIPDAMR-------------------IRGLQPKLLNIVASYRFER---------TLHEESRRVAEHDYVAATRRFHHAQRRAVRVDIPQ-SRC--QGCLEPFAGPSPAKPPPDLPPRAPESVDVRELHVFSCKHFYHDICCLAVERHGSAPEAGKEGGKTVGRQSP 1253          
BLAST of jgi.p|Trimin1|346795 vs. uniprot
Match: A0A6H5KF08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF08_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 1.050e-30
Identity = 142/489 (29.04%), Postives = 179/489 (36.61%), Query Frame = 0
Query:   67 SCSQDGTVVVTSLQHDNGGXXXXXGADSECCLTIDIHLTFMTVLGADRASXXXXXXDRSEEVYTYGA--PVAAVRLDPLYARRRDKVFIAGGTAGKVASSLMTLVFDARDSTVHLGXXXXXXXXXXXXXXXXXXXXXLMLNKRGWSSHKEALXXXXXXXXXXXXXVLHEGEGAVSAIAWRGSLVAWANGRGVKIMDVDKIMDVDKVRALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKFFFAXXXXXXXXXXXXXXXXXXXDKMKCGAACSKVLLXXXXXXXXXXXXAVSDEEPVSAVDKPRGALH-----------WESDSCLLMAWGDTFLILQVGIRE---------------------GSTAAGLLERVRTSSEGTS-LAGTLEGGVVAARMA--------PKRVAEITALWQSDCLICGVSPFDADTLVLLGYPVPQSLAEARE-------AAAAAGPEVQLVRRATGE 505
            S S+DGTVVVT LQ          GA+ E                             + EVY+YGA  P+ AV+LDPLYARR+DK F+AGG AGK                                         L+LNK+GW  H E               VLH+GEG VS++AWRG LVAWA+  G+KIMDVDK                                                    GK                                                      E +S VDKPR  +            WE+ + LL+ WGDT ++LQ+ +RE                     G+ +AG   R RTS   T+ + G L   V+ A  A        P+R  +I A+WQSDCLICG+SPFD+DT+VLLGYPV                      PEVQLV+R +GE
Sbjct:   27 SSSEDGTVVVTGLQ---------PGANGE---------------------------HTAPEVYSYGAKWPMLAVKLDPLYARRKDKTFVAGGAAGK-----------------------------------------LLLNKKGWLGHDEV--------------VLHKGEGPVSSVAWRGPLVAWASDGGLKIMDVDK----------------------------------------------------GK----------------------------------------------------GGERISYVDKPRSLVDFKEHECRCHMLWETPTRLLVGWGDTVMVLQILVREPKYQRGGSLSPMRQPHHSPPGGNGSAGDNNR-RTSVPLTNPIGGGLPIAVIGAPTAAAPVALEAPERYTQIVAVWQSDCLICGLSPFDSDTVVLLGYPVEXXXXXXXXXXXXXVVVKGVFQPEVQLVKRQSGE 319          
BLAST of jgi.p|Trimin1|346795 vs. uniprot
Match: A0A7R9UA10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA10_9STRA)

HSP 1 Score: 107 bits (268), Expect = 4.610e-20
Identity = 170/724 (23.48%), Postives = 247/724 (34.12%), Query Frame = 0
Query:  134 PVAAVRLDPLYARRRDKVFIAGGTAGKVASSLMTLVFDARDSTVHLGXXXXXXXXXXXXXXXXXXXXXLMLNKRGWSSHKEALXXXXXXXXXXXXXVLHEGEGAVSAIAWRG----SLVAWANGRGVKIMDV---DKIMDVDKVRALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKFFFAXXXXXXXXXXXXXXXXXXXDKMKCGAACSKVLLXXXXXXXXXXXXAVSDEEPVSAVDKPRGALHWESDSCLLMAWGDTFLILQV-------GIREGSTAAGLLERVR----TSSEGTSLAGTLEGGVV-----------AARMAPKRVAEITALWQSDCLICGVSPFDADTLVLLGYPVPQSLAEAREAAAAAGPEVQLVRRATGENP---GRRVVGHAELVHQLEELRSVLAADTLPLNGWQN------NLAGHYCMASTSWSPGAIRWPRGKAAQAGAASAMHINTAAAXXXXXXXXXTTAGLPPALFIAAPQSAPHQHLLRDFLRLPFSDPHRLSAPQARDAACAAPLPGVARAPPMRRARDADLVVA--RDLVVARVRDVDDSXXXXXXXXXXXXXVAWALQRGDAGAAVRVALRNRHSLRTHSYRDLVARRLEELMGEGRYEVXXXXXXXXXXXXXXXAAAETPLLLGSDAAAWEQWIYAFARRGRLDAIAPHVPPLPEQEGGGEALPAASLRLAGSVYMLILE 817
            P+  + LDP +  RR+++ + GG  G+                                         L+L++RGW S +                +LHEGEG V A+AWRG    +L+AW N +GVKIMD+   ++I  +++  +                                                                    D + C       L                 +     +DK R      S   L + W DT + + V              AAG +         + +G    G +  G V           +A +A  R AEI+ +   +CLICG+ PFD  +LVLLG+  P S  E +     A  +      + G +P   G   V   EL         VL+ D LPL GW+       +L  H+   +   +P  I    G   QAG A+                             AAPQ  PH  +  +                           GV  +     A    +VV   RD V+AR+RD DD              + W L +G  GAAV VA  N+  L+ HS   L+   +E L+ E +YE                AA    +LLG D A WE+++YAFA +G+L  IAPH+P          A PA   RL   +Y L+L+
Sbjct:  131 PLLCIALDPQFGHRRERMVVVGGDRGQ-----------------------------------------LVLDRRGWFSGRRE--------------ILHEGEGPVQAVAWRGRGSCALLAWTNEKGVKIMDIVTGERISFIERPES----------------------------------------------------------------SYHDDALNCRCH----LRWDGSTDGGAALGLPPPQTTADGIDKDRVVNR--SQPVLFIGWADTIMRVDVVGEVDATSPHRSKAAAGQMSLAPGVPGVTKDGNGDLGGVGAGAVGGDLGDPADPHSAVIAGVRYAEISLIITVECLICGLGPFDMSSLVLLGFVPPYS--EPKNGRYDAYSD-----DSNGSDPETEGALEVFQPELSIIGLPNGHVLSRDALPLRGWEKYDVQDLSLKVHFRRRNAPSAPNPIG--AGMLTQAGDAAGS---------------------------AAPQP-PHGGIWVN---------------------------GVGNSWSYSGAAPPRIVVTSVRDCVLARLRDADDK-------------IDWILSKGQIGAAVEVARTNKRLLKRHSLIQLITDYIEGLLEEEKYE---------------KAADSCVMLLGHDDALWERFVYAFADKGKLSVIAPHLPTGSATYASPPADPAQGFRLKSEIYELVLD 637          
BLAST of jgi.p|Trimin1|346795 vs. uniprot
Match: A0A2P6NPI8_9EUKA (Vacuolar protein sorting-associated protein 41 homolog n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NPI8_9EUKA)

HSP 1 Score: 101 bits (252), Expect = 6.460e-18
Identity = 96/331 (29.00%), Postives = 142/331 (42.90%), Query Frame = 0
Query: 1073 AVHFRVLELIQLSQADAGALLVRHVDKLPAAQVVPQLRGRRDLXXXXXXXXXXXXQHWYLHLLFTQAPELYNTPEHAQFHALQVSLYAQFAPPFQPRRPPPYDSDFLR-FLRGSAF--APLEAALTECEKRRPPLWDEMV-----------ALSVLLEEVDCARRAIEFVGA-HDKDLWYRLIDYSLRNERFLGGLLDHAGVYTLVLRDTYXXXXXXXXXXXXXXXXXXXXXXXXXXDVDLAGLIRGVPEGMRAXXXXXXXXXXXXXXXXXRIQGLREKLGKITSDYRFQXXXXXXXXXVTLHETCLSSLRSDHLAKLRRLNQMRRRALRV 1388
            AV  +VL L+      A  +LV H+D++P  +VV QLR                  H YLH LF + P++ +T     +H LQV LYAQ            YD  +L  FL+ S      LE A   CE+R    + EMV           AL +L+E +   + AIEF+   +D +LW  LIDYS++N +F+ GLL+H G Y                                   +D   LI+ +P GM                    ++ LR+++ KI SDY  Q         ++L E C   L++D +  ++RL++  RR +RV
Sbjct:  570 AVRSKVLLLMDYDSKKAVKMLVTHIDQIPVPEVVEQLR------------PYPLMLHSYLHALFLKDPQVGST-----YHELQVGLYAQ------------YDYSYLMTFLKQSDHWALGLENAYQICEERN--YYPEMVYILGRMGRVKQALQLLIERIGDVKTAIEFIDTQNDDELWEDLIDYSMKNPKFVSGLLEHIGAY-----------------------------------IDPVRLIKRIPMGME-------------------VKNLRDRIVKIISDYHLQ---------MSLREGCNEILKADCVDLIQRLHRSNRRGVRV 806          
BLAST of jgi.p|Trimin1|346795 vs. uniprot
Match: A0A7S1G523_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G523_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 8.670e-18
Identity = 57/133 (42.86%), Postives = 70/133 (52.63%), Query Frame = 0
Query: 1077 RVLELIQLSQADAGALLVRHVDKLPAAQVVPQLRGRRDLXXXXXXXXXXXXQHWYLHLLFTQAPELYNTPEHAQFHALQVSLYAQFAPPFQPRRPPPYDSDFLRFLRGSAFAPLEAALTECEKRRPPLWDEMV 1209
            +VL L+QL +A A A+LV +V  +PA  V  QLR +                H YLH +FT   E YNT +HA FH LQ+ +YA+FAP            D L FLR S   PLE A   C K RPPL+ EMV
Sbjct:   41 KVLRLMQLDEAGAVAMLVANVAHIPAQSVAFQLRDKAHRRLL----------HRYLHHMFTTRTEEYNTSKHADFHELQLGMYAEFAP-----------GDLLAFLRASQHYPLEQAYEVCSKHRPPLYHEMV 152          
BLAST of jgi.p|Trimin1|346795 vs. uniprot
Match: F0XVF2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVF2_AURAN)

HSP 1 Score: 97.1 bits (240), Expect = 2.210e-16
Identity = 69/184 (37.50%), Postives = 88/184 (47.83%), Query Frame = 0
Query:  658 LVVARDLVVARVRDVDDSXXXXXXXXXXXXXVAWALQRGD-AGAAVRVALRNRH--SLRTHSYRDLVARRLEELMGEGRYEVXXXXXXXXXXXXXXXAAAETPLLLGSDAAAWEQWIYAFARRGRLDAIAPHVPPLPEQEGGGEALPAASLRLAGSVYMLILEHLLTAKPPLFLETVRRWGHPR 838
            +V  RD+V+ARVRDVDD              +   L+RGD AG    +A+ N    S+R H   DLV   L+ L+  G+ E                AAA  P  LG+ A  WE WI+ F RRG L  +AP +P              A  RLA SVY ++LE LL   PP  L  V+RWGHP+
Sbjct:  375 VVSPRDVVLARVRDVDDQ-------------IELCLKRGDDAGFRDALAIANAFPASVRRHRLPDLVKAHLDALLDAGQAEA---------------AAAACPQFLGASATLWEYWIFVFDRRGALARLAPRIP-------------TAEPRLAPSVYDMVLERLLETDPPALLAAVKRWGHPK 517          
BLAST of jgi.p|Trimin1|346795 vs. uniprot
Match: A0A2P6NGE3_9EUKA (RING zinc finger-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NGE3_9EUKA)

HSP 1 Score: 92.4 bits (228), Expect = 5.430e-15
Identity = 85/301 (28.24%), Postives = 129/301 (42.86%), Query Frame = 0
Query: 1060 SAYSSILRIVLRAAVHFRVLELIQLSQADAGALLVRHVDKLPAAQVVPQLRGRRDLXXXXXXXXXXXXQHWYLHLLFTQAPELYNTPEHAQFHALQVSLYAQFAPPFQPRRPPPYDSDFLR-FLRGSAFAPLEAALTECEKRRPPLWDEMV-----------ALSVLLEEVDCARRAIEFVGA-HDKDLWYRLIDYSLRNERFLGGLLDHAGVYTLVLRDTYXXXXXXXXXXXXXXXXXXXXXXXXXXDVDLAGLIRGVPEGMRAXXXXXXXXXXXXXXXXXRIQGLREKLGKITSDYRFQ 1347
            +A+ +I +  L  ++  +V  L+      A  +LV H +++P A+VV QLRG                 H YLH LF + P +  T     +H +QV+LYA+            Y+ +FL  FL+ S +  LE A   C  ++   + EMV           AL +L+E +   ++AIEF+   +D +LW  LIDYS++N RF+ GLL+H G Y                                   VD   LI+ +P GM                    + GLR+++ KI SDY  Q
Sbjct:  841 NAFETIEQYDLFDSIRDKVHLLMDYDPKRAVQMLVSHTERVPIAEVVDQLRG------------YPLMLHNYLHALFEKDPHIGQT-----YHEMQVALYAE------------YNYEFLMTFLKQSNYWALERAYQVCADKK--YYPEMVYILGRMGKVKQALQLLIENIADVKKAIEFIEPQNDDELWEDLIDYSMKNPRFVSGLLEHIGAY-----------------------------------VDPVRLIKRIPIGME-------------------VIGLRDRIVKIISDYNLQ 1056          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346795 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBT2_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FS06_ECTSI1.690e-11028.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFS4_9PHAE4.840e-7139.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TUN1_9STRA5.070e-6224.72Vacuolar protein sorting-associated protein 41 n=2... [more]
A0A6H5KF08_9PHAE1.050e-3029.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9UA10_9STRA4.610e-2023.48Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A2P6NPI8_9EUKA6.460e-1829.00Vacuolar protein sorting-associated protein 41 hom... [more]
A0A7S1G523_9STRA8.670e-1842.86Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
F0XVF2_AURAN2.210e-1637.50Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A2P6NGE3_9EUKA5.430e-1528.24RING zinc finger-containing protein n=1 Tax=Planop... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 39..78
e-value: 2.8E-4
score: 30.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..395
e-value: 9.1E-10
score: 40.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 949..1003
NoneNo IPR availablePANTHERPTHR12616:SF1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 41 HOMOLOGcoord: 1266..1446
NoneNo IPR availablePANTHERPTHR12616:SF1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 41 HOMOLOGcoord: 8..262
NoneNo IPR availablePANTHERPTHR12616:SF1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 41 HOMOLOGcoord: 1010..1260
coord: 321..937
IPR045111Vacuolar protein sorting-associated protein Vps41/Vps8PANTHERPTHR12616VACUOLAR PROTEIN SORTING VPS41coord: 321..937
IPR045111Vacuolar protein sorting-associated protein Vps41/Vps8PANTHERPTHR12616VACUOLAR PROTEIN SORTING VPS41coord: 1266..1446
IPR045111Vacuolar protein sorting-associated protein Vps41/Vps8PANTHERPTHR12616VACUOLAR PROTEIN SORTING VPS41coord: 1010..1260
IPR045111Vacuolar protein sorting-associated protein Vps41/Vps8PANTHERPTHR12616VACUOLAR PROTEIN SORTING VPS41coord: 8..262
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 23..345

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_5contigContig_5:913925..941640 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346795mRNA_2343Tribonema minus UTEX_B_3156 mRNAContig_5 913825..941640 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346795|estExt_Genemark1.C_Ctg_50093 ID=Trimin1|346795|estExt_Genemark1.C_Ctg_50093|Name=jgi.p|Trimin1|346795|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1476bp
MSSSLALGTETGAMWTVALHDACLALGTETGAIYLTDFHGNLSRRLRPHR
GAIHDISIDASGEFVASCSQDGTVVVTSLQHDNGGGGGGAGADSECCLTI
DIHLTFMTVLGADRASGGGGGGDRSEEVYTYGAPVAAVRLDPLYARRRDK
VFIAGGTAGKVASSLMTLVFDARDSTVHLGLDPLYARRRDEVFIAGGTAG
KLMLNKRGWSSHKEALVLNKRGWFSHKEAVLHEGEGAVSAIAWRGSLVAW
ANGRGVKIMDVDKIMDVDKVRALLVAWANGRGVRIMDVDKCLRCIAWRGS
PIAWANDRGVRIMDVGKFFFAWRGSLIAWANGRGVKIVDVDKMKCGAACS
KVLLVAWANGRGVKIIAVSDEEPVSAVDKPRGALHWESDSCLLMAWGDTF
LILQVGIREGSTAAGLLERVRTSSEGTSLAGTLEGGVVAARMAPKRVAEI
TALWQSDCLICGVSPFDADTLVLLGYPVPQSLAEAREAAAAAGPEVQLVR
RATGENPGRRVVGHAELVHQLEELRSVLAADTLPLNGWQNNLAGHYCMAS
TSWSPGAIRWPRGKAAQAGAASAMHINTAAAAAATVATAATTAGLPPALF
IAAPQSAPHQHLLRDFLRLPFSDPHRLSAPQARDAACAAPLPGVARAPPM
RRARDADLVVARDLVVARVRDVDDSDLVVARVRDVDDSVAWALQRGDAGA
AVRVALRNRHSLRTHSYRDLVARRLEELMGEGRYEVARRLEELMGEGRYE
AAAAETPLLLGSDAAAWEQWIYAFARRGRLDAIAPHVPPLPEQEGGGEAL
PAASLRLAGSVYMLILEHLLTAKPPLFLETVRRWGHPRDAAAAARRAEVS
TADTAASAPSRQAQGVAAAKALYSLSPLMMAGAAATKELYSLSLLMAAIE
SALRARLGAHVLEAQAELLLLDRQFERAVGAYLTMARVRAAAAAARAEDD
DGALPPPGDGAAYRRRTARCHHPATALQEDDGAPPGDSAAYSGGGGGGGG
SSEVAPRTAAHVFKLIEQHSLFRAIQGRVRELVQLSQAGAIQIPSSSPRR
HANAKILTSSAYSSILRIVLRAAVHFRVLELIQLSQADAGALLVRHVDKL
PAAQVVPQLRGRRDLQVVPQLRGRHDLQHWYLHLLFTQAPELYNTPEHAQ
FHALQVSLYAQFAPPFQPRRPPPYDSDFLRFLRGSAFAPLEAALTECEKR
RPPLWDEMVALSVLLEEVDCARRAIEFVGAHDKDLWYRLIDYSLRNERFL
GGLLDHAGVYTLVLRDTYVWYRLIDYSLHNERFLEGLLDHAGVYDVDLAG
LIRGVPEGMRAVYDVDLAGLIRGVPEGMRIQGLREKLGKITSDYRFQKVT
SDYRFQVTLHETCLSSLRSDHLAKLRRLNQMRRRALRVSAGGGSSCSARA
CCSVEPSPPASAHAQCTPGRGIAASGGLRVFACGHSFHEACLKPQAGLRG
GPQRGGSCPGCAGSGGALSGALALR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR045111Vps41/Vps8
IPR036322WD40_repeat_dom_sf