Trimin1|346794|estExt_Genemark1.C_Ctg_50092 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346794
Unique NameTrimin1|346794|estExt_Genemark1.C_Ctg_50092
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length62
Homology
BLAST of jgi.p|Trimin1|346794 vs. uniprot
Match: A0A836CD85_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD85_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.170e-41
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
Query:    1 MIRYFIPSDGDDADHPNVFQLPSSAVSGGNGTLRLGDVMRHFPLPGTYHFRFKKKFRDGFVW 62
            MIRYFIPSDGDDADHPNVFQLPSSAVSGGNGTLRLGDVMRHFPLPGTYHFRFKKKFRDGFVW
Sbjct:    1 MIRYFIPSDGDDADHPNVFQLPSSAVSGGNGTLRLGDVMRHFPLPGTYHFRFKKKFRDGFVW 62          
BLAST of jgi.p|Trimin1|346794 vs. uniprot
Match: D8LR97_ECTSI (DIX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR97_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 3.190e-27
Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 MIRYFIPSDGDDADHPNVFQLPSSAVSGGNGTLRLGDVMRHFPLPGTYHFRFKKKFRDGFVW 62
            MIRYFIP+DGDD  HPNVFQLPS  V  G+G++R GDV RHFPLPG YHFRFKKKFRD FVW
Sbjct:    1 MIRYFIPADGDDPSHPNVFQLPSGLV--GSGSVRCGDVERHFPLPGRYHFRFKKKFRDAFVW 60          
BLAST of jgi.p|Trimin1|346794 vs. uniprot
Match: A0A7S2RG08_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RG08_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.660e-16
Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 0
Query:    2 IRYFIPSDGDDADHPNVFQL--PSSAVSGGNGTLRLGDVMRHFPLPGTYHFRFKKKFRDGFVW 62
            I YF+P DGD+ DHPNVF +  PSS V       RLGDV + FPLPG YHFRFKK F++ FVW
Sbjct:    6 IYYFVPEDGDEEDHPNVFTISRPSSKV-------RLGDVKKTFPLPGRYHFRFKKAFKNTFVW 61          
BLAST of jgi.p|Trimin1|346794 vs. uniprot
Match: A0A4D9D8A1_9STRA (DIX domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8A1_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 7.520e-15
Identity = 36/59 (61.02%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    1 MIRYFIPSDGDDADHPNVFQLPSSAVSGGNGTLRLGDVMRHFPLPGTYHFRFKKKFRDG 59
            MIRY+IP DGDDA HPN+F LP S         RL DV +HFPLPG YHFRFK +  DG
Sbjct:    1 MIRYYIPGDGDDASHPNIFHLPPSVQQ----PPRLRDVRQHFPLPGAYHFRFKTRL-DG 54          
BLAST of jgi.p|Trimin1|346794 vs. uniprot
Match: A0A8J2WQP4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WQP4_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.660e-14
Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    2 IRYFIPSDGDDADHPNVFQLPSSAVSGGNGTLRLGDVMRHFPLPGTYHFRFKKKFRDGFVW 62
            IRY +P DGDDA HPNVF+L S       G +R+GDV RHFPLPG +H RF+++     VW
Sbjct:    4 IRYHVPEDGDDAAHPNVFELVSE------GAVRVGDVRRHFPLPGRFHLRFRRRVAGLEVW 58          
BLAST of jgi.p|Trimin1|346794 vs. uniprot
Match: UPI0007114B76 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007114B76)

HSP 1 Score: 70.5 bits (171), Expect = 1.730e-13
Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    1 MIRYFIPSDGDDADHPNVFQLPSSAVSGGNGTLRLGDVMRHFPLPGTYHFRFKKKFRDGFVW 62
            +I+Y+IP DGDD DHPNV+ +   +      T+ + D+   FP+PGTY+FRFK+ F+  ++W
Sbjct:    6 VIQYYIPEDGDDMDHPNVYSIDKKST-----TITVTDIRNSFPIPGTYYFRFKRAFKKTWIW 62          
BLAST of jgi.p|Trimin1|346794 vs. uniprot
Match: A0A6V2AT95_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2AT95_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.480e-13
Identity = 34/58 (58.62%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    2 IRYFIPSDGDDADHPNVFQLPSSAVSGGNGTLRLGDVMRHFPLPGTYHFRFKKKFRDG 59
            IRYF+P DGD   HPNVF  P S+  G  GT  LG V   FPLPGTYHFRFK     G
Sbjct:    4 IRYFVPEDGDSELHPNVFLAPKSSRPG--GTPLLGQVKEAFPLPGTYHFRFKSPLFPG 59          
BLAST of jgi.p|Trimin1|346794 vs. uniprot
Match: A0A2R5GFE7_9STRA (DIX domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFE7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.580e-13
Identity = 30/61 (49.18%), Postives = 36/61 (59.02%), Query Frame = 0
Query:    2 IRYFIPSDGDDADHPNVFQLPSSAVSGGNGTLRLGDVMRHFPLPGTYHFRFKKKFRDGFVW 62
            + YF+P DGDD  HPN F L   A       +R  DV   FPLPG YH RFKK F++ +VW
Sbjct:    6 VYYFVPEDGDDEAHPNFFSLSKPAAK-----VRAADVRAAFPLPGAYHLRFKKAFKNTYVW 61          
BLAST of jgi.p|Trimin1|346794 vs. uniprot
Match: D8M8I1_BLAHO (DIX domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M8I1_BLAHO)

HSP 1 Score: 68.9 bits (167), Expect = 5.680e-13
Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    2 IRYFIPSDGDDADHPNVFQLPSSAVSGGNGTLRLGDVMRHFPLPGTYHFRFKKKFRDGFVW 62
            + Y+IP DGD+ADHPNV  L  +A       + L D+   FP+PGTY+FRFK+ F++ ++W
Sbjct:    7 VLYYIPEDGDEADHPNVMTLDKNASQ-----VTLKDIREAFPIPGTYYFRFKRTFKNSWIW 62          
BLAST of jgi.p|Trimin1|346794 vs. uniprot
Match: A0A813H049_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H049_POLGL)

HSP 1 Score: 67.4 bits (163), Expect = 1.760e-12
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 0
Query:    2 IRYFIPSDGDDADHPNVFQLPSSAVSGGNGTLRLGDVMRHFPLPGTYHFRFKKKFRDGFVW 62
            + YFIP DGDDADHPN F++           ++L ++   FPLPG YHFRF+ K+  G VW
Sbjct:   14 LYYFIPGDGDDADHPNTFEVQHQGPG-----VKLREIRACFPLPGKYHFRFRMKWEAGHVW 69          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346794 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CD85_9STRA1.170e-41100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
D8LR97_ECTSI3.190e-2777.42DIX domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2RG08_9STRA1.660e-1660.32Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A4D9D8A1_9STRA7.520e-1561.02DIX domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A8J2WQP4_9STRA1.660e-1454.10Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
UPI0007114B761.730e-1343.55hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]
A0A6V2AT95_9STRA3.480e-1358.62Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
A0A2R5GFE7_9STRA3.580e-1349.18DIX domain-containing protein n=1 Tax=Hondaea ferm... [more]
D8M8I1_BLAHO5.680e-1345.90DIX domain-containing protein n=1 Tax=Blastocystis... [more]
A0A813H049_POLGL1.760e-1247.54Hypothetical protein n=2 Tax=Polarella glacialis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR42509FAMILY NOT NAMEDcoord: 1..58
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 2..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_5contigContig_5:906047..908076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346794mRNA_2342Tribonema minus UTEX_B_3156 mRNAContig_5 905881..908076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346794|estExt_Genemark1.C_Ctg_50092 ID=Trimin1|346794|estExt_Genemark1.C_Ctg_50092|Name=jgi.p|Trimin1|346794|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=62bp
MIRYFIPSDGDDADHPNVFQLPSSAVSGGNGTLRLGDVMRHFPLPGTYHF
RFKKKFRDGFVW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf